Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 3.1e-119 432.2 283 100.0
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 1.1e-111 407.1 300 89.0
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 5.6e-60 235.3 291 59.1
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 1.2e-59 234.2 298 55.7
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 8.1e-59 231.5 295 54.9
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 2.4e-55 219.9 296 52.7
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 5.4e-55 218.8 302 54.3
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 6.0e-54 215.3 317 48.3
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 2.4e-50 203.4 272 51.5
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 3.1e-50 203.0 178 67.4
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 4.0e-50 202.6 303 49.2
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 7.3e-44 181.8 141 72.3
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 1.8e-42 177.2 163 63.8
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 3.1e-42 176.4 151 66.2
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 4.0e-42 176.0 180 58.3
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 4.0e-42 176.0 134 70.1
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 6.9e-42 175.3 150 66.0
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 9.0e-42 174.9 139 69.1
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 1.2e-41 174.5 237 51.5
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 2.6e-41 173.3 145 64.8
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 7.6e-41 171.8 117 77.8
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 7.6e-41 171.8 131 71.0
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 7.6e-41 171.8 143 65.0
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 9.9e-41 171.4 128 72.7
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 1.7e-40 170.6 149 61.7
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 1.7e-40 170.6 133 69.9
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 4.9e-40 169.1 112 74.1
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.4e-39 167.5 131 70.2
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 1.4e-39 167.5 131 70.2
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 1.4e-39 167.5 119 73.9
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.2e-39 166.0 126 69.0
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 5.4e-39 165.6 178 56.7
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 7.1e-39 165.2 123 73.2
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 7.1e-39 165.2 152 62.5
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.2e-38 164.5 140 64.3
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 3.5e-38 162.9 113 75.2
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 4.6e-38 162.5 136 66.2
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 7.9e-38 161.8 152 61.8
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 7.9e-38 161.8 138 63.8
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.0e-37 161.4 254 48.4
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 1.0e-37 161.4 138 63.8
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.3e-37 161.0 105 76.2
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 1.3e-37 161.0 153 60.1
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-37 161.0 153 60.1
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 1.3e-37 161.0 157 61.8
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.3e-37 161.0 137 64.2
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 1.8e-37 160.6 131 66.4
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.3e-37 160.2 140 62.9
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 2.3e-37 160.2 156 60.3
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 2.3e-37 160.2 134 64.2
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 2.3e-37 160.2 104 76.9
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 3.0e-37 159.8 126 66.7
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 3.0e-37 159.8 153 61.4
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 3.0e-37 159.8 141 63.1
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 3.9e-37 159.5 141 61.0
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 5.1e-37 159.1 140 57.9
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 5.1e-37 159.1 115 72.2
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 6.7e-37 158.7 141 62.4
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 6.7e-37 158.7 141 62.4
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.1e-36 157.9 135 64.4
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 1.5e-36 157.5 151 58.3
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 1.5e-36 157.5 136 61.8
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 1.9e-36 157.1 143 60.8
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 2.5e-36 156.8 119 67.2
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 3.3e-36 156.4 175 54.9
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 9.6e-36 154.8 101 78.2
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 1.6e-35 154.1 121 66.9
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 3.7e-35 152.9 165 55.2
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 4.8e-35 152.5 154 56.5
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 6.2e-35 152.1 144 59.7
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 8.1e-35 151.8 107 72.9
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 1.1e-34 151.4 108 70.4
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.8e-34 150.6 104 73.1
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 3.1e-34 149.8 113 69.0
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 6.9e-34 148.7 134 60.4
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 6.9e-34 148.7 174 50.6
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 6.9e-34 148.7 139 60.4
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 6.9e-34 148.7 125 64.0
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 1.2e-33 147.9 145 60.7
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.2e-33 147.9 127 63.8
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.2e-33 147.9 118 64.4
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 4.5e-33 146.0 101 74.3
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 4.5e-33 146.0 139 59.7
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 9.9e-33 144.8 112 69.6
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 9.9e-33 144.8 112 69.6
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 9.9e-33 144.8 142 59.2
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 9.9e-33 144.8 101 73.3
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 1.3e-32 144.4 124 63.7
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.7e-32 144.1 143 58.7
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 3.8e-32 142.9 139 59.7
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 8.4e-32 141.7 124 62.9
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 1.1e-31 141.4 136 58.1
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 2.4e-31 140.2 137 58.4
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 2.4e-31 140.2 137 58.4
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 2.4e-31 140.2 137 58.4
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 7.1e-31 138.7 135 59.3
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 7.1e-31 138.7 135 59.3
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 9.3e-31 138.3 122 64.8
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.2e-30 137.9 154 55.2
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 2.1e-30 137.1 127 58.3
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 2.1e-30 137.1 257 41.6
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 2.7e-30 136.7 98 70.4
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 3.5e-22 109.8 123 45.5
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 6.0e-22 109.0 161 48.4
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 3.9e-21 106.3 55 96.4
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 7.4e-20 102.1 128 47.7
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 3.1e-18 96.7 105 47.6
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 6.9e-18 95.5 127 43.3
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 4.5e-17 92.8 134 41.0
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 1.2e-14 84.7 57 70.2
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.1e-14 84.0 56 71.4
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.1e-14 84.0 56 71.4
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 2.1e-14 84.0 66 65.2
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.7e-14 83.6 67 64.2
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 6.1e-14 82.4 83 57.8
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.1e-14 82.4 57 68.4
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-13 81.3 65 64.6
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 5.1e-13 79.3 51 76.5
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 8.8e-13 78.6 48 81.2
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.7e-11 74.3 77 55.8
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 3.4e-09 66.6 105 38.1


User provided reference genes

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