Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RCL750 Arachis hypogaea HOM05D004848 ORTHO05D006859 4.7e-155 551.2 291 100.0
Lalb_Chr03g0024651 Lupinus albus HOM05D004848 ORTHO05D006859 2.6e-76 289.7 292 59.2
Medtr4g075580 Medicago truncatula HOM05D004848 ORTHO05D006859 1.2e-68 264.2 280 53.2
TPR.G17182 Trifolium pratense HOM05D004848 ORTHO05D006859 1.0e-64 251.1 275 51.3
Ca_08517_v3 Cicer arietinum L. HOM05D004848 ORTHO05D006859 3.4e-60 236.1 279 49.8
TWI38G1208 Tripterygium wilfordii HOM05D004848 ORTHO05D006859 5.8e-60 235.3 277 49.1
Manes.16G057700 Manihot esculenta HOM05D004848 ORTHO05D006859 1.9e-58 230.3 298 47.0
VMungo1127G1128 Vigna mungo HOM05D004848 ORTHO05D006859 1.9e-58 230.3 267 50.2
Dinv25912 Davidia involucrata HOM05D004848 ORTHO05D006859 2.7e-57 226.5 294 45.9
CSS0017265 Camellia sinensis var. sinensis HOM05D004848 ORTHO05D006859 3.5e-57 226.1 295 47.1
CiPaw.10G064700 Carya illinoinensis HOM05D004848 ORTHO05D006859 3.5e-57 226.1 282 47.5
Phvul.011G025900 Phaseolus vulgaris HOM05D004848 ORTHO05D006859 1.0e-56 224.6 286 47.2
Cfa000710 Carpinus fangiana HOM05D004848 ORTHO05D006859 1.3e-56 224.2 281 48.0
Psat7g178040 Pisum sativum HOM05D004848 ORTHO05D006859 2.3e-56 223.4 268 50.4
MD10G1232500 Malus domestica HOM05D004848 ORTHO05D006859 5.0e-56 222.2 302 45.4
Sed0003868 Sechium edule HOM05D004848 ORTHO05D006859 3.3e-55 219.5 290 46.2
Glyma.11G097851 Glycine max HOM05D004848 ORTHO05D006859 2.8e-54 216.5 274 48.9
Prupe.4G112000 Prunus persica HOM05D004848 ORTHO05D006859 2.8e-54 216.5 291 44.7
Hund22216 Selenicereus undatus HOM05D004848 ORTHO05D006859 2.8e-54 216.5 313 44.7
vmacro03521 Vaccinium macrocarpon HOM05D004848 ORTHO05D006859 3.6e-54 216.1 287 45.6
Rhsim13G0132200 Rhododendron simsii HOM05D004848 ORTHO05D006859 4.0e-53 212.6 296 44.3
ClCG01G025720 Citrullus lanatus HOM05D004848 ORTHO05D006859 8.9e-53 211.5 275 46.5
DCAR_007788 Daucus carota HOM05D004848 ORTHO05D006859 1.5e-52 210.7 297 45.5
CANSAT35G1894 Cannabis sativa HOM05D004848 ORTHO05D006859 9.8e-52 208.0 278 44.6
MD05G1251700 Malus domestica HOM05D004848 ORTHO05D006859 1.3e-51 207.6 302 43.4
Actinidia22396 Actinidia chinensis HOM05D004848 ORTHO05D006859 1.7e-51 207.2 278 44.2
CsaV3_6G052960 Cucumis sativus L. HOM05D004848 ORTHO05D006859 2.2e-51 206.8 272 46.3
Gohir.D05G148000 Gossypium hirsutum HOM05D004848 ORTHO05D006859 4.9e-51 205.7 309 43.0
Potri.015G122200 Populus trichocarpa HOM05D004848 ORTHO05D006859 4.9e-51 205.7 281 43.8
Gorai.009G152200 Gossypium raimondii HOM05D004848 ORTHO05D006859 1.1e-50 204.5 309 42.7
RcHm_v2.0_Chr5g0020101 Rosa chinensis HOM05D004848 ORTHO05D006859 1.4e-50 204.1 294 41.8
FvH4_3g12290 Fragaria vesca HOM05D004848 ORTHO05D006859 1.9e-50 203.8 296 41.2
FAN16G1950 Fragaria x ananassa HOM05D004848 ORTHO05D006859 3.2e-50 203.0 296 40.9
Sabra15G0138300 Salix brachista HOM05D004848 ORTHO05D006859 3.2e-50 203.0 283 43.8
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 5.4e-50 202.2 285 43.9
Ciclev10014513m.g Citrus clementina HOM05D004848 ORTHO05D006859 9.2e-50 201.4 287 43.2
Thecc.06G143000 Theobroma cacao HOM05D004848 ORTHO05D006859 1.6e-49 200.7 298 42.3
COL.COLO4_30993 Corchorus olitorius HOM05D004848 ORTHO05D006859 2.1e-49 200.3 312 42.3
Thhalv10024627m.g Eutrema salsugineum HOM05D004848 ORTHO05D006859 2.1e-49 200.3 284 43.7
Lsat_1_v5_gn_2_63860 Lactuca sativa HOM05D004848 ORTHO05D006859 2.1e-49 200.3 281 43.4
MELO3C007013.2 Cucumis melo HOM05D004848 ORTHO05D006859 2.7e-49 199.9 285 44.2
FAN25G1789 Fragaria x ananassa HOM05D004848 ORTHO05D006859 3.5e-49 199.5 299 40.8
FAN21G0923 Fragaria x ananassa HOM05D004848 ORTHO05D006859 6.0e-49 198.7 296 41.2
Sc12g0008200 Simmondsia chinensis HOM05D004848 ORTHO05D006859 6.0e-49 198.7 304 43.1
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 1.0e-48 198.0 277 42.2
Carub.0007s2131 Capsella rubella HOM05D004848 ORTHO05D006859 1.0e-48 198.0 158 60.8
Lj1A1145G19 Lonicera japonica HOM05D004848 ORTHO05D006859 1.3e-48 197.6 170 58.2
GSVIVG01012068001 Vitis vinifera HOM05D004848 ORTHO05D006859 2.3e-48 196.8 179 55.9
Atru.chr10.537 Acer truncatum HOM05D004848 ORTHO05D006859 3.9e-48 196.1 293 43.3
Atru.chr10.533 Acer truncatum HOM05D004848 ORTHO05D006859 5.1e-48 195.7 293 43.3
AL7G34080 Arabidopsis lyrata HOM05D004848 ORTHO05D006859 5.1e-48 195.7 228 47.8
Duzib235G0624 Durio zibethinus HOM05D004848 ORTHO05D006859 6.6e-48 195.3 298 41.3
THA.LOC104806215 Tarenaya hassleriana HOM05D004848 ORTHO05D006859 1.1e-47 194.5 280 43.6
Gohir.A05G145600 Gossypium hirsutum HOM05D004848 ORTHO05D006859 4.3e-47 192.6 309 41.1
AT4G19900 Arabidopsis thaliana HOM05D004848 ORTHO05D006859 9.5e-47 191.4 287 42.2
EL10Ac5g12737 Beta vulgaris HOM05D004848 ORTHO05D006859 9.5e-47 191.4 191 53.9
TAR371G0760 Trochodendron aralioides HOM05D004848 ORTHO05D006859 1.2e-46 191.0 311 41.5
Cpa.g.sc135.8 Carica papaya HOM05D004848 ORTHO05D006859 2.1e-46 190.3 184 53.3
BcaC01g00643 Brassica carinata HOM05D004848 ORTHO05D006859 3.6e-46 189.5 212 49.1
A08p14580 Brassica napus HOM05D004848 ORTHO05D006859 3.6e-46 189.5 208 49.5
BraA08t33444Z Brassica rapa HOM05D004848 ORTHO05D006859 3.6e-46 189.5 208 49.5
CARHR226680 Cardamine hirsuta HOM05D004848 ORTHO05D006859 4.7e-46 189.1 291 41.2
CAN.G149.35 Capsicum annuum HOM05D004848 ORTHO05D006859 1.8e-45 187.2 291 40.9
TAR371G0139 Trochodendron aralioides HOM05D004848 ORTHO05D006859 4.0e-45 186.0 311 40.5
C03p82150 Brassica napus HOM05D004848 ORTHO05D006859 5.2e-45 185.7 212 48.6
BolC3t20538H Brassica oleracea HOM05D004848 ORTHO05D006859 5.2e-45 185.7 212 48.6
BcaB03g11645 Brassica carinata HOM05D004848 ORTHO05D006859 6.8e-45 185.3 283 42.0
HanXRQChr14g0447411 Helianthus annuus HOM05D004848 ORTHO05D006859 6.8e-45 185.3 290 42.1
Nitab4.5_0000818g0090 Nicotiana tabacum HOM05D004848 ORTHO05D006859 6.8e-45 185.3 288 42.0
Nitab4.5_0004246g0030 Nicotiana tabacum HOM05D004848 ORTHO05D006859 8.9e-45 184.9 288 42.0
Duzib160G0177 Durio zibethinus HOM05D004848 ORTHO05D006859 1.5e-44 184.1 288 41.7
Aqoxy1G01449 Aquilegia oxysepala HOM05D004848 ORTHO05D006859 2.6e-44 183.3 192 48.4
Solyc02g068790.4 Solanum lycopersicum HOM05D004848 ORTHO05D006859 5.8e-44 182.2 285 41.8
Sopen02g017950 Solanum pennellii HOM05D004848 ORTHO05D006859 5.8e-44 182.2 285 41.8
AUR62003215 Chenopodium quinoa HOM05D004848 ORTHO05D006859 1.7e-43 180.6 275 42.2
Nitab4.5_0001288g0240 Nicotiana tabacum HOM05D004848 ORTHO05D006859 1.7e-43 180.6 288 41.3
PSO541G1718 Papaver somniferum HOM05D004848 ORTHO05D006859 2.9e-43 179.9 289 41.5
PSO675G2729 Papaver somniferum HOM05D004848 ORTHO05D006859 4.9e-43 179.1 289 41.2
SalBow6G5406 Salvia bowleyana HOM05D004848 ORTHO05D006859 6.4e-43 178.7 292 39.0
SalBow8G3445 Salvia bowleyana HOM05D004848 ORTHO05D006859 6.4e-43 178.7 292 39.0
EL10Ac2g03656 Beta vulgaris HOM05D004848 ORTHO05D006859 8.3e-43 178.3 278 42.1
AUR62008037 Chenopodium quinoa HOM05D004848 ORTHO05D006859 8.3e-43 178.3 284 40.1
arahy.Tifrunner.gnm1.ann1.DSI1DH Arachis hypogaea HOM05D004848 ORTHO05D006859 1.1e-42 177.9 154 66.2
Oeu056030.1 Olea europaea HOM05D004848 ORTHO05D006859 3.2e-42 176.4 287 39.7
Lalb_Chr16g0385221 Lupinus albus HOM05D004848 ORTHO05D006859 7.1e-42 175.3 208 51.4
Migut.M01981 Erythranthe guttata HOM05D004848 ORTHO05D006859 1.6e-41 174.1 279 40.5
SGA_v2.0_scaffold175G39362 Striga asiatica HOM05D004848 ORTHO05D006859 2.7e-41 173.3 157 56.1
Nn7g38150 Nelumbo nucifera HOM05D004848 ORTHO05D006859 6.0e-41 172.2 299 39.1
MSTRG.13293 Avicennia marina HOM05D004848 ORTHO05D006859 1.7e-40 170.6 287 39.4
CiPaw.09G077200 Carya illinoinensis HOM05D004848 ORTHO05D006859 3.0e-40 169.9 285 40.4
Ah.02g126290 Amaranthus hybridus HOM05D004848 ORTHO05D006859 5.1e-40 169.1 275 40.4
Peaxi162Scf00149g00052 Petunia axillaris HOM05D004848 ORTHO05D006859 5.1e-40 169.1 280 39.3
Cc09_g06070 Coffea canephora HOM05D004848 ORTHO05D006859 6.6e-40 168.7 298 38.9
MBI18_g11477_MAGBIO Magnolia biondii HOM05D004848 ORTHO05D006859 8.6e-40 168.3 216 48.1
QL11p016422 Quercus lobata HOM05D004848 ORTHO05D006859 1.1e-39 167.9 167 56.9
Psat7g130520 Pisum sativum HOM05D004848 ORTHO05D006859 1.5e-39 167.5 281 40.2
Lj4g0026898 Lotus japonicus HOM05D004848 ORTHO05D006859 5.6e-39 165.6 283 39.2
SHI34205 Sapria himalayana HOM05D004848 ORTHO05D006859 7.3e-39 165.2 214 45.3
Glyma.20G020100 Glycine max HOM05D004848 ORTHO05D006859 4.7e-38 162.5 280 40.0
Phvul.002G098100 Phaseolus vulgaris HOM05D004848 ORTHO05D006859 4.7e-38 162.5 275 39.6
AUR62024532 Chenopodium quinoa HOM05D004848 ORTHO05D006859 6.2e-38 162.2 198 46.0
AUR62022464 Chenopodium quinoa HOM05D004848 ORTHO05D006859 5.2e-37 159.1 207 41.5
VMungo0251G2797 Vigna mungo HOM05D004848 ORTHO05D006859 6.8e-37 158.7 277 39.7
arahy.Tifrunner.gnm1.ann1.4Z5NYX Arachis hypogaea HOM05D004848 ORTHO05D006859 1.3e-35 154.5 271 38.0
ATR0763G002 Amborella trichopoda HOM05D004848 ORTHO05D006859 2.2e-35 153.7 170 47.1
CDE02G3340 Ceratophyllum demersum HOM05D004848 ORTHO05D006859 6.4e-35 152.1 293 36.2
PGR042G2559 Punica granatum HOM05D004848 ORTHO05D006859 8.4e-35 151.8 166 48.8
arahy.Tifrunner.gnm1.ann1.84J3B2 Arachis hypogaea HOM05D004848 ORTHO05D006859 1.1e-34 151.4 278 37.1
unitig_21.g20196 Utricularia gibba HOM05D004848 ORTHO05D006859 4.6e-33 146.0 227 37.9
Medtr4g084060 Medicago truncatula HOM05D004848 ORTHO05D006859 1.3e-32 144.4 285 37.2
TWI63G1813 Tripterygium wilfordii HOM05D004848 ORTHO05D006859 5.1e-32 142.5 185 47.0
HPP92_015950 Vanilla planifolia HOM05D004848 ORTHO05D006859 8.7e-32 141.7 214 40.2
Ca_18763_v3 Cicer arietinum L. HOM05D004848 ORTHO05D006859 1.9e-31 140.6 198 42.9
Os07g0567300 Oryza sativa ssp. japonica HOM05D004848 ORTHO05D006859 6.9e-29 132.1 205 40.5
SEGI_06238 Sequoiadendron giganteum HOM05D004848 ORTHO05D006859 2.0e-28 130.6 207 38.2
Zm00001eb324590 Zea mays HOM05D004848 ORTHO05D006859 7.8e-25 118.6 197 38.1
TPR.G20986 Trifolium pratense HOM05D004848 ORTHO05D006859 1.0e-24 118.2 100 57.0
CDE05G1435 Ceratophyllum demersum HOM05D004848 ORTHO05D006859 8.7e-24 115.2 292 34.2
arahy.Tifrunner.gnm1.ann1.26KT5A Arachis hypogaea HOM05D004848 ORTHO05D006859 3.3e-23 113.2 86 70.9
Glyma.07G221700 Glycine max HOM05D004848 ORTHO05D006859 3.6e-22 109.8 116 50.9
AagrBONN_evm.TU.Sc2ySwM_344.2562 Anthoceros agrestis HOM05D004848 ORTHO05D006859 9.0e-13 78.6 189 32.8
VMungo1309G0455 Vigna mungo HOM05D010006 ORTHO05D009911 2.3e-08 63.9 75 46.7
Mapoly0045s0054 Marchantia polymorpha HOM05D004848 ORTHO05D006859 1.1e-07 61.6 103 36.9
Pp3c5_15800 Physcomitrium patens HOM05D004848 ORTHO05D006859 3.7e-06 56.6 99 37.4


User provided reference genes

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