Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L0PZ9J Arachis hypogaea HOM05D006292 ORTHO05D006110 6.1e-45 183.7 90 100.0
arahy.Tifrunner.gnm1.ann1.RC41H8 Arachis hypogaea HOM05D006292 ORTHO05D006110 6.1e-45 183.7 90 100.0
Lalb_Chr05g0216081 Lupinus albus HOM05D006292 ORTHO05D006110 5.4e-17 90.9 101 55.4
Lalb_Chr09g0325661 Lupinus albus HOM05D006292 ORTHO05D006110 7.1e-17 90.5 97 52.6
Lalb_Chr16g0381361 Lupinus albus HOM05D006292 ORTHO05D006110 1.6e-16 89.4 100 54.0
Glyma.01G018500 Glycine max HOM05D006292 ORTHO05D006110 2.1e-16 89.0 102 53.9
Ca_06080_v3 Cicer arietinum L. HOM05D006292 ORTHO05D006110 1.3e-15 86.3 99 52.5
Lj2g0014920 Lotus japonicus HOM05D006292 ORTHO05D006110 2.3e-15 85.5 108 47.2
Glyma.09G204400 Glycine max HOM05D006292 ORTHO05D006110 3.0e-15 85.1 102 49.0
Medtr5g030470 Medicago truncatula HOM05D006292 ORTHO05D006110 3.9e-15 84.7 100 49.0
TPR.G3912 Trifolium pratense HOM05D006292 ORTHO05D006110 2.5e-14 82.0 99 49.5
Psat2g135960 Pisum sativum HOM05D006292 ORTHO05D006110 7.3e-14 80.5 98 48.0
Phvul.002G141600 Phaseolus vulgaris HOM05D006292 ORTHO05D006110 3.4e-11 71.6 103 41.7
VMungo1215G0846 Vigna mungo HOM05D006292 ORTHO05D006110 5.8e-11 70.9 118 41.5
Lj4g0026533 Lotus japonicus HOM05D006292 ORTHO05D006110 9.9e-11 70.1 104 48.1
arahy.Tifrunner.gnm1.ann1.46AG3A Arachis hypogaea HOM05D006292 ORTHO05D006110 2.4e-09 65.5 99 46.5
arahy.Tifrunner.gnm1.ann1.92QZ6T Arachis hypogaea HOM05D006292 ORTHO05D006110 7.1e-09 63.9 99 45.5
THA.LOC104814444 Tarenaya hassleriana HOM05D006292 ORTHO05D006110 3.5e-08 61.6 91 45.1
Thhalv10017673m.g Eutrema salsugineum HOM05D006292 ORTHO05D006110 4.6e-08 61.2 97 39.2
Sed0015746 Sechium edule HOM05D006292 ORTHO05D006110 1.3e-07 59.7 106 37.7
Sp4g17440 Schrenkiella parvula HOM05D006292 ORTHO05D006110 1.7e-07 59.3 96 38.5
BcaC02g07728 Brassica carinata HOM05D006292 ORTHO05D006110 2.3e-07 58.9 90 40.0
A04p26770 Brassica napus HOM05D006292 ORTHO05D006110 2.3e-07 58.9 90 40.0
C04p64170 Brassica napus HOM05D006292 ORTHO05D006110 2.3e-07 58.9 90 40.0
BolC4t27900H Brassica oleracea HOM05D006292 ORTHO05D006110 2.3e-07 58.9 90 40.0
BraA04t18181Z Brassica rapa HOM05D006292 ORTHO05D006110 2.3e-07 58.9 90 40.0
TPR.G28248 Trifolium pratense HOM05D006292 ORTHO05D006110 2.3e-07 58.9 99 40.4
A05p10540 Brassica napus HOM05D006292 ORTHO05D006110 3.0e-07 58.5 96 40.6
BraA05t19992Z Brassica rapa HOM05D006292 ORTHO05D006110 3.0e-07 58.5 96 40.6
Potri.001G142250 Populus trichocarpa HOM05D006292 ORTHO05D006110 3.0e-07 58.5 105 41.0
TWI60G0215 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 3.0e-07 58.5 102 39.2
BcaB06g28832 Brassica carinata HOM05D006292 ORTHO05D006110 3.9e-07 58.2 90 40.0
BolC4t22939H Brassica oleracea HOM05D006292 ORTHO05D006110 3.9e-07 58.2 96 39.6
Glyma.03G113900 Glycine max HOM05D006292 ORTHO05D006110 3.9e-07 58.2 103 42.7
Manes.15G181600 Manihot esculenta HOM05D006292 ORTHO05D006110 3.9e-07 58.2 103 38.8
CARHR129380 Cardamine hirsuta HOM05D006292 ORTHO05D006110 5.1e-07 57.8 96 38.5
BcaC02g11625 Brassica carinata HOM05D006292 ORTHO05D006110 6.6e-07 57.4 96 39.6
C04p12960 Brassica napus HOM05D006292 ORTHO05D006110 6.6e-07 57.4 96 39.6
Medtr8g067270 Medicago truncatula HOM05D006292 ORTHO05D006110 6.6e-07 57.4 103 41.7
BolC4t22949H Brassica oleracea HOM05D006292 ORTHO05D006110 8.7e-07 57.0 96 40.6
AT2G35215 Arabidopsis thaliana HOM05D006292 ORTHO05D006110 1.1e-06 56.6 96 35.4
BcaB02g09469 Brassica carinata HOM05D006292 ORTHO05D006110 1.5e-06 56.2 94 39.4
Psat4g118000 Pisum sativum HOM05D006292 ORTHO05D006110 1.9e-06 55.8 104 38.5
CiPaw.11G093500 Carya illinoinensis HOM05D006292 ORTHO05D006110 2.5e-06 55.5 99 40.4
Ciclev10013401m.g Citrus clementina HOM05D006292 ORTHO05D006110 3.3e-06 55.1 107 37.4
AL4G31240 Arabidopsis lyrata HOM05D006292 ORTHO05D006110 5.6e-06 54.3 96 35.4
Carub.0004s1692 Capsella rubella HOM05D006292 ORTHO05D006110 9.6e-06 53.5 98 35.7
Glyma.07G112800 Glycine max HOM05D006292 ORTHO05D006110 9.6e-06 53.5 104 39.4
RcHm_v2.0_Chr7g0209741 Rosa chinensis HOM05D006292 ORTHO05D006110 9.6e-06 53.5 117 35.9


User provided reference genes

Program Settings