Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RBM67I Arachis hypogaea HOM05D000533 ORTHO05D002807 4.1e-99 364.8 188 100.0
arahy.Tifrunner.gnm1.ann1.U57TMC Arachis hypogaea HOM05D000533 ORTHO05D002807 1.0e-97 360.1 188 98.9
arahy.Tifrunner.gnm1.ann1.CXW88U Arachis hypogaea HOM05D000533 ORTHO05D002807 6.1e-87 324.3 184 90.2
LjContig00318g0007609 Lotus japonicus HOM05D000533 ORTHO05D002807 5.7e-85 317.8 177 92.1
LjContig00319g0005103 Lotus japonicus HOM05D000533 ORTHO05D002807 5.7e-85 317.8 177 92.1
EL10Ac1g02291 Beta vulgaris HOM05D000533 ORTHO05D002807 1.4e-83 313.2 179 89.4
EL10As15g24098 Beta vulgaris HOM05D000533 ORTHO05D002807 1.4e-83 313.2 179 89.4
PGR111G0022 Punica granatum HOM05D000533 ORTHO05D002807 2.0e-82 309.3 175 89.7
Sed0004290 Sechium edule HOM05D000533 ORTHO05D002807 1.7e-81 306.2 179 87.2
Solyc00g500041.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.5e-80 302.4 183 83.6
CAN.G1045.10 Capsicum annuum HOM05D000533 ORTHO05D002807 7.2e-80 300.8 183 83.6
CAN.G1526.1 Capsicum annuum HOM05D000533 ORTHO05D002807 7.2e-80 300.8 183 83.6
CAN.G1298.18 Capsicum annuum HOM05D000533 ORTHO05D002807 9.4e-80 300.4 183 83.6
Sed0023589 Sechium edule HOM05D000533 ORTHO05D002807 1.6e-79 299.7 179 84.4
CARHR282470 Cardamine hirsuta HOM05D000533 ORTHO05D002807 2.7e-79 298.9 183 84.7
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 3.6e-79 298.5 175 87.4
Solyc00g500086.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.6e-79 298.5 187 80.7
Solyc00g500123.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.6e-79 298.5 187 80.7
Solyc00g500193.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.6e-79 298.5 187 80.7
DCAR_032541 Daucus carota HOM05D000533 ORTHO05D002807 6.1e-79 297.7 175 86.9
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 6.1e-79 297.7 162 90.7
Medtr4g050810 Medicago truncatula HOM05D000533 ORTHO05D006151 8.0e-79 297.4 161 91.3
C09p40310 Brassica napus HOM05D000533 ORTHO05D002807 1.8e-78 296.2 177 86.4
BolC9t56913H Brassica oleracea HOM05D000533 ORTHO05D002807 1.8e-78 296.2 177 87.0
BolSC29t60509H Brassica oleracea HOM05D000533 ORTHO05D002807 1.8e-78 296.2 177 86.4
BolSC35t60689H Brassica oleracea HOM05D000533 ORTHO05D002807 1.8e-78 296.2 177 86.4
BolSC35t60707H Brassica oleracea HOM05D000533 ORTHO05D002807 1.8e-78 296.2 177 86.4
BolSC47t61062H Brassica oleracea HOM05D000533 ORTHO05D002807 1.8e-78 296.2 177 86.4
BolSC49t61146H Brassica oleracea HOM05D000533 ORTHO05D002807 1.8e-78 296.2 177 86.4
BraSC103t45432Z Brassica rapa HOM05D000533 ORTHO05D002807 1.8e-78 296.2 177 86.4
BraSC143t45657Z Brassica rapa HOM05D000533 ORTHO05D002807 1.8e-78 296.2 177 86.4
Migut.D01249 Erythranthe guttata HOM05D000533 ORTHO05D002807 1.8e-78 296.2 176 84.7
Lju5009P0T26 Lonicera japonica HOM05D000533 ORTHO05D002807 1.8e-78 296.2 175 85.7
ATCG01100 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 2.3e-78 295.8 183 84.2
SalBow1G0006 Salvia bowleyana HOM05D000533 ORTHO05D002807 5.2e-78 294.7 183 83.6
PSO548G0012 Papaver somniferum HOM05D000533 ORTHO05D002807 6.7e-78 294.3 175 85.7
AL9U11959 Arabidopsis lyrata HOM05D000533 ORTHO05D002807 2.0e-77 292.7 177 85.3
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 4.4e-77 291.6 162 88.3
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 5.7e-77 291.2 168 87.5
BolSC29t60549H Brassica oleracea HOM05D000533 ORTHO05D002807 9.7e-77 290.4 186 80.1
Solyc11g021230.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.7e-76 289.7 176 83.5
HanXRQChr00c0289g0573151 Helianthus annuus HOM05D000533 ORTHO05D002807 5.3e-75 284.6 174 83.3
Peaxi162Scf00030g02119 Petunia axillaris HOM05D000533 ORTHO05D006151 8.5e-73 277.3 160 86.2
Peaxi162Scf00269g01411 Petunia axillaris HOM05D000533 ORTHO05D006151 8.5e-73 277.3 160 86.2
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-72 276.2 160 86.9
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-72 276.2 160 86.9
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-72 276.2 160 86.9
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-72 276.2 160 86.9
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-72 276.2 160 86.9
BolSC44t60825H Brassica oleracea HOM05D000533 ORTHO05D002807 9.4e-72 273.9 162 85.8
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 2.1e-71 272.7 163 83.4
MELO3C000179.2 Cucumis melo HOM05D000533 ORTHO05D002807 6.1e-71 271.2 157 87.9
Sed0023659 Sechium edule HOM05D000533 ORTHO05D002807 5.4e-67 258.1 179 76.0
arahy.Tifrunner.gnm1.ann1.F0S3GF Arachis hypogaea HOM05D000533 ORTHO05D002807 3.0e-62 242.3 128 100.0
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 5.2e-62 241.5 131 90.8
Sed0007463 Sechium edule HOM05D000533 ORTHO05D002807 5.2e-62 241.5 179 71.5
BraSC58t46464Z Brassica rapa HOM05D000533 ORTHO05D002807 4.4e-61 238.4 180 73.3
Gohir.1Z049702 Gossypium hirsutum HOM05D000533 ORTHO05D002807 2.8e-60 235.7 142 86.6
Solyc02g080275.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.4e-59 233.4 139 84.9
Lalb_Chr07g0191801 Lupinus albus HOM05D000533 ORTHO05D002807 4.5e-58 228.4 129 93.8
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 8.6e-57 224.2 163 71.2
Lsat_1_v5_gn_4_118121 Lactuca sativa HOM05D000533 ORTHO05D002807 1.9e-56 223.0 160 72.5
Gohir.D05G308833 Gossypium hirsutum HOM05D000533 ORTHO05D002807 2.9e-52 209.1 125 83.2
Gorai.009G395200 Gossypium raimondii HOM05D000533 ORTHO05D002807 2.0e-50 203.0 168 66.7
FAN01G0230 Fragaria x ananassa HOM05D000533 ORTHO05D002807 3.5e-50 202.2 118 83.1
BolC2t10599H Brassica oleracea HOM05D000533 ORTHO05D002807 1.4e-46 190.3 119 84.9
EL10As15g24139 Beta vulgaris HOM05D000533 ORTHO05D002807 1.8e-46 189.9 142 70.4
Gohir.A10G063750 Gossypium hirsutum HOM05D000533 ORTHO05D002807 5.8e-45 184.9 99 90.9
TPR.G31189 Trifolium pratense HOM05D000533 ORTHO05D002807 8.3e-44 181.0 104 85.6
Lsat_1_v5_gn_8_62921 Lactuca sativa HOM05D000533 ORTHO05D002807 2.4e-43 179.5 113 81.4
Solyc11g050760.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.2e-43 179.1 109 79.8
HanXRQChr00c0336g0573691 Helianthus annuus HOM05D000533 ORTHO05D002807 1.0e-41 174.1 101 88.1
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-41 174.1 101 88.1
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 1.3e-41 173.7 93 97.8
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 1.3e-41 173.7 93 97.8
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 1.3e-41 173.7 93 97.8
Glyma.18G155550 Glycine max HOM05D000533 ORTHO05D002807 1.3e-41 173.7 125 76.8
Nitab4.5_0001313g0090 Nicotiana tabacum HOM05D000533 ORTHO05D002807 2.3e-41 172.9 124 72.6
HanXRQChr00c0504g0575311 Helianthus annuus HOM05D000533 ORTHO05D006151 3.0e-41 172.6 132 72.7
Nn1g07318 Nelumbo nucifera HOM05D000533 ORTHO05D002807 1.1e-40 170.6 94 89.4
BraSC138t45532Z Brassica rapa HOM05D000533 ORTHO05D002807 6.8e-38 161.4 137 64.2
CsaV3_1G022940 Cucumis sativus L. HOM05D000533 ORTHO05D002807 2.0e-37 159.8 80 95.0
SMO086G0018 Selaginella moellendorffii HOM05D000533 ORTHO05D002807 3.7e-36 155.6 173 57.2
Psat1g104920 Pisum sativum HOM05D000533 ORTHO05D002807 8.3e-36 154.5 77 93.5
Nitab4.5_0001783g0140 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.1e-34 149.8 111 73.0
Lalb_Chr09g0335431 Lupinus albus HOM05D000533 ORTHO05D002807 1.0e-33 147.5 103 76.7
CSS0023353 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D006151 3.0e-33 146.0 130 63.8
Nn1g00560 Nelumbo nucifera HOM05D000533 ORTHO05D002807 6.6e-33 144.8 73 94.5
Duzib093G2216 Durio zibethinus HOM05D000533 ORTHO05D002807 1.9e-32 143.3 136 61.8
Gohir.D11G334101 Gossypium hirsutum HOM05D000533 ORTHO05D002807 9.5e-32 141.0 82 85.4
Eucgr.B03250 Eucalyptus grandis HOM05D000533 ORTHO05D002807 5.8e-29 131.7 72 90.3
Nitab4.5_0017884g0010 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.3e-28 130.6 101 66.3
HanXRQChr01g0020061 Helianthus annuus HOM05D000533 ORTHO05D006151 2.9e-28 129.4 139 57.6
Solyc02g011790.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.8e-28 129.0 148 53.4
COL.COLO4_02137 Corchorus olitorius HOM05D000533 ORTHO05D002807 8.4e-28 127.9 153 45.8
Medtr4g451555 Medicago truncatula HOM05D000533 ORTHO05D002807 2.3e-25 119.8 70 87.1
RcHm_v2.0_CPg0502741 Rosa chinensis HOM05D000533 ORTHO05D002807 2.8e-23 112.8 65 90.8
HanXRQChr01g0000271 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-21 107.5 62 80.6
Gohir.D04G093016 Gossypium hirsutum HOM05D000533 ORTHO05D002807 1.1e-19 100.9 174 43.1
HanXRQChr00c0703g0576931 Helianthus annuus HOM05D000533 ORTHO05D002807 3.2e-19 99.4 76 69.7
Nitab4.5_0001783g0070 Nicotiana tabacum HOM05D000216 ORTHO05D002807 2.7e-18 96.3 71 71.8
CARHR060450 Cardamine hirsuta HOM05D000533 ORTHO05D002807 7.8e-18 94.7 71 67.6
Lsat_1_v5_gn_5_174020 Lactuca sativa HOM05D000533 ORTHO05D002807 7.8e-18 94.7 65 72.3
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 3.0e-17 92.8 47 89.4
arahy.Tifrunner.gnm1.ann1.KIF45B Arachis hypogaea HOM05D000533 ORTHO05D002807 1.5e-16 90.5 42 92.9
Migut.D01386 Erythranthe guttata HOM05D000533 ORTHO05D002807 3.6e-15 85.9 41 92.7
Psat0s1160g0360 Pisum sativum HOM05D000533 ORTHO05D006151 5.8e-13 78.6 51 74.5
Psat0s6989g0200 Pisum sativum HOM05D000533 ORTHO05D006151 5.8e-13 78.6 51 74.5
Psat3g095000 Pisum sativum HOM05D000533 ORTHO05D006151 5.8e-13 78.6 51 74.5
Psat6g140600 Pisum sativum HOM05D000533 ORTHO05D006151 5.8e-13 78.6 51 74.5
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 4.9e-12 75.5 107 46.7
EL10Ac6g14288 Beta vulgaris HOM05D000533 ORTHO05D002807 7.9e-10 68.2 47 59.6
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 5.1e-09 65.5 64 50.0
BolSC37t60796H Brassica oleracea HOM05D000533 ORTHO05D002807 4.3e-08 62.4 30 83.3
THA.LOC104820711 Tarenaya hassleriana HOM05D000533 ORTHO05D002807 1.3e-07 60.8 91 36.3
EL10Ac6g13955 Beta vulgaris HOM05D000533 ORTHO05D002807 6.2e-07 58.5 28 92.9
Haze_27295 Corylus avellana HOM05D000533 ORTHO05D002807 9.0e-06 54.7 138 31.2


User provided reference genes

Program Settings