Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RB2TUX Arachis hypogaea HOM05D002852 ORTHO05D003174 9.9e-68 260.0 132 100.0
arahy.Tifrunner.gnm1.ann1.GC682Y Arachis hypogaea HOM05D002852 ORTHO05D084842 2.2e-19 99.4 150 46.7
arahy.Tifrunner.gnm1.ann1.7S2LJQ Arachis hypogaea HOM05D002852 ORTHO05D026880 7.2e-18 94.4 61 78.7
arahy.Tifrunner.gnm1.ann1.0756ZF Arachis hypogaea HOM05D002852 ORTHO05D003174 1.1e-15 87.0 66 66.7
Glyma.08G123200 Glycine max HOM05D002852 ORTHO05D003174 1.5e-15 86.7 71 62.0
Phvul.002G245900 Phaseolus vulgaris HOM05D002852 ORTHO05D003174 1.3e-14 83.6 72 59.7
Lj3g0020242 Lotus japonicus HOM05D002852 ORTHO05D003174 3.7e-14 82.0 69 58.0
Lalb_Chr07g0185971 Lupinus albus HOM05D002852 ORTHO05D003174 2.4e-13 79.3 69 58.0
Glyma.15G079000 Glycine max HOM05D002852 ORTHO05D003174 1.6e-12 76.6 69 55.1
Lalb_Chr18g0057671 Lupinus albus HOM05D002852 ORTHO05D003174 2.0e-12 76.3 66 57.6
VMungo0540G0105 Vigna mungo HOM05D000365 ORTHO05D000154 2.0e-12 76.3 69 53.6
TAR629G1486 Trochodendron aralioides HOM05D002852 ORTHO05D003174 2.6e-12 75.9 69 53.6
Cc09_g09640 Coffea canephora HOM05D002852 ORTHO05D003174 3.5e-12 75.5 88 47.7
TPR.G28689 Trifolium pratense HOM05D002852 ORTHO05D003174 3.5e-12 75.5 82 47.6
Glyma.13G234000 Glycine max HOM05D002852 ORTHO05D003174 4.5e-12 75.1 104 41.3
Rhsim12G0043000 Rhododendron simsii HOM05D002852 ORTHO05D003174 7.7e-12 74.3 75 49.3
Dinv30699 Davidia involucrata HOM05D002852 ORTHO05D003174 1.7e-11 73.2 69 52.2
Oeu014550.1 Olea europaea HOM05D002852 ORTHO05D003174 1.7e-11 73.2 66 54.5
Peaxi162Scf00121g02434 Petunia axillaris HOM05D002852 ORTHO05D003174 1.7e-11 73.2 69 53.6
Medtr5g019990 Medicago truncatula HOM05D002852 ORTHO05D003174 2.2e-11 72.8 69 52.2
Sopen02g002390 Solanum pennellii HOM05D002852 ORTHO05D003174 2.2e-11 72.8 69 53.6
Haze_05528 Corylus avellana HOM05D002852 ORTHO05D003174 2.9e-11 72.4 69 50.7
Phvul.006G181000 Phaseolus vulgaris HOM05D002852 ORTHO05D003174 3.8e-11 72.0 69 52.2
Duzib235G1049 Durio zibethinus HOM05D002852 ORTHO05D003174 5.0e-11 71.6 69 52.2
TWI09G0466 Tripterygium wilfordii HOM05D002852 ORTHO05D003174 6.5e-11 71.2 66 53.0
Atru.chr10.1370 Acer truncatum HOM05D002852 ORTHO05D003174 8.5e-11 70.9 66 53.0
Aqoxy5G03029 Aquilegia oxysepala HOM05D003001 ORTHO05D003174 1.5e-10 70.1 83 39.8
CAN.G5.6 Capsicum annuum HOM05D002852 ORTHO05D003174 3.2e-10 68.9 69 50.7
Aqoxy1G03406 Aquilegia oxysepala HOM05D002852 ORTHO05D003174 4.2e-10 68.6 69 44.9
PSO541G5486 Papaver somniferum HOM05D002852 ORTHO05D003174 4.2e-10 68.6 70 50.0
PSO675G8025 Papaver somniferum HOM05D002852 ORTHO05D003174 4.2e-10 68.6 70 50.0
ATR0767G199 Amborella trichopoda HOM05D002852 ORTHO05D003174 5.5e-10 68.2 69 47.8
Nitab4.5_0003527g0010 Nicotiana tabacum HOM05D002852 ORTHO05D003174 5.5e-10 68.2 55 60.0
arahy.Tifrunner.gnm1.ann1.8ZRS2Y Arachis hypogaea HOM05D002852 ORTHO05D003174 7.2e-10 67.8 56 62.5
arahy.Tifrunner.gnm1.ann1.PI7FGC Arachis hypogaea HOM05D002852 ORTHO05D003174 7.2e-10 67.8 56 62.5
MSTRG.13244 Avicennia marina HOM05D002852 ORTHO05D003174 7.2e-10 67.8 66 51.5
CDE07G0019 Ceratophyllum demersum HOM05D002852 ORTHO05D003174 7.2e-10 67.8 66 50.0
PGR042G3089 Punica granatum HOM05D002852 ORTHO05D003174 7.2e-10 67.8 104 38.5
Thecc.06G156400 Theobroma cacao HOM05D002852 ORTHO05D003174 7.2e-10 67.8 69 47.8
THA.LOC104812660 Tarenaya hassleriana HOM05D002852 ORTHO05D003174 9.4e-10 67.4 69 49.3
AL1G43650 Arabidopsis lyrata HOM05D002852 ORTHO05D003174 1.2e-09 67.0 66 51.5
Prupe.4G075000 Prunus persica HOM05D002852 ORTHO05D003174 1.2e-09 67.0 66 50.0
HPP92_023828 Vanilla planifolia HOM05D003185 ORTHO05D009915 1.2e-09 67.0 69 46.4
GSVIVG01021392001 Vitis vinifera HOM05D002852 ORTHO05D003174 1.2e-09 67.0 66 50.0
Carub.0001s2806 Capsella rubella HOM05D002852 ORTHO05D003174 1.6e-09 66.6 66 51.5
AUR62035788 Chenopodium quinoa HOM05D002852 ORTHO05D003174 1.6e-09 66.6 69 47.8
SGA_v2.0_scaffold106G30623 Striga asiatica HOM05D002852 ORTHO05D003174 1.6e-09 66.6 86 40.7
HPP92_023893 Vanilla planifolia HOM05D002852 ORTHO05D003174 1.6e-09 66.6 69 46.4
FvH4_3g06270 Fragaria vesca HOM05D002852 ORTHO05D003174 2.1e-09 66.2 69 44.9
FAN11G1812 Fragaria x ananassa HOM05D002852 ORTHO05D003174 2.1e-09 66.2 69 44.9
FAN21G1255 Fragaria x ananassa HOM05D003390 ORTHO05D004189 2.1e-09 66.2 69 44.9
FAN25G3015 Fragaria x ananassa HOM05D002852 ORTHO05D003174 2.1e-09 66.2 69 44.9
Duzib192G0410 Durio zibethinus HOM05D002852 ORTHO05D003174 2.7e-09 65.9 69 46.4
Thhalv10008867m.g Eutrema salsugineum HOM05D002852 ORTHO05D003174 2.7e-09 65.9 69 50.7
Gohir.A06G135700 Gossypium hirsutum HOM05D002852 ORTHO05D003174 2.7e-09 65.9 69 46.4
Gohir.D06G141000 Gossypium hirsutum HOM05D002852 ORTHO05D003174 2.7e-09 65.9 69 46.4
Gorai.010G164400 Gossypium raimondii HOM05D002852 ORTHO05D003174 2.7e-09 65.9 69 46.4
RcHm_v2.0_Chr5g0013041 Rosa chinensis HOM05D002852 ORTHO05D003174 2.7e-09 65.9 69 43.5
TWI73G0510 Tripterygium wilfordii HOM05D002852 ORTHO05D003174 2.7e-09 65.9 66 48.5
BcaB07g32569 Brassica carinata HOM05D002852 ORTHO05D003174 4.7e-09 65.1 69 49.3
Eucgr.L02251 Eucalyptus grandis HOM05D002852 ORTHO05D003174 4.7e-09 65.1 66 48.5
Sc24g0001810 Simmondsia chinensis HOM05D002852 ORTHO05D003174 4.7e-09 65.1 69 46.4
Aa31LG6G5800 Aethionema arabicum HOM05D002852 ORTHO05D003174 6.1e-09 64.7 69 49.3
Aqoxy4G00122 Aquilegia oxysepala HOM05D002852 ORTHO05D003174 6.1e-09 64.7 66 45.5
CARHR029620 Cardamine hirsuta HOM05D002852 ORTHO05D003174 6.1e-09 64.7 69 49.3
ECA248G1216 Erigeron canadensis HOM05D002852 ORTHO05D003174 6.1e-09 64.7 114 40.4
Lj1A1183T67 Lonicera japonica HOM05D002852 ORTHO05D003174 6.1e-09 64.7 66 50.0
Nn3g20869 Nelumbo nucifera HOM05D002852 ORTHO05D003174 6.1e-09 64.7 69 47.8
Rhsim12G0042800 Rhododendron simsii HOM05D002852 ORTHO05D003174 6.1e-09 64.7 69 50.7
Eucgr.E02363 Eucalyptus grandis HOM05D002852 ORTHO05D003174 8.0e-09 64.3 66 48.5
AUR62027571 Chenopodium quinoa HOM05D002852 ORTHO05D003174 1.0e-08 63.9 69 44.9
MD05G1290700 Malus domestica HOM05D002852 ORTHO05D003174 1.0e-08 63.9 66 50.0
Oeu001051.1 Olea europaea HOM05D002852 ORTHO05D003174 1.0e-08 63.9 78 43.6
Sp1g25710 Schrenkiella parvula HOM05D002852 ORTHO05D003174 1.0e-08 63.9 69 49.3
AT1G29810 Arabidopsis thaliana HOM05D002852 ORTHO05D003174 1.4e-08 63.5 69 47.8
BcaC05g26996 Brassica carinata HOM05D002852 ORTHO05D003174 1.4e-08 63.5 69 49.3
C05p28560 Brassica napus HOM05D002852 ORTHO05D003174 1.4e-08 63.5 69 49.3
BolC5t31580H Brassica oleracea HOM05D002852 ORTHO05D003174 1.4e-08 63.5 69 49.3
Ciclev10016856m.g Citrus clementina HOM05D002852 ORTHO05D003174 1.4e-08 63.5 69 47.8
Zm00001eb157590 Zea mays HOM05D002852 ORTHO05D003174 1.4e-08 63.5 66 48.5
A09p36650 Brassica napus HOM05D002852 ORTHO05D003174 1.8e-08 63.2 69 49.3
Migut.H01385 Erythranthe guttata HOM05D002852 ORTHO05D003174 1.8e-08 63.2 67 44.8
SMO337G0051 Selaginella moellendorffii HOM05D002852 ORTHO05D003174 1.8e-08 63.2 82 40.2
Sed0017870 Sechium edule HOM05D002852 ORTHO05D003174 2.3e-08 62.8 69 46.4
EL10Ac8g19778 Beta vulgaris HOM05D002852 ORTHO05D003174 3.0e-08 62.4 69 46.4
unitig_61.g26021 Utricularia gibba HOM05D002852 ORTHO05D003174 3.0e-08 62.4 66 47.0
BraA09t39184Z Brassica rapa HOM05D002852 ORTHO05D003174 4.0e-08 62.0 69 47.8
CiPaw.10G094100 Carya illinoinensis HOM05D002852 ORTHO05D003174 4.0e-08 62.0 69 47.8
Actinidia39556 Actinidia chinensis HOM05D005404 ORTHO05D006623 5.2e-08 61.6 69 47.8
Nitab4.5_0000206g0170 Nicotiana tabacum HOM05D002852 ORTHO05D003174 5.2e-08 61.6 134 35.8
Manes.15G117900 Manihot esculenta HOM05D002852 ORTHO05D003174 1.2e-07 60.5 73 42.5
Potri.011G078900 Populus trichocarpa HOM05D002852 ORTHO05D003174 1.2e-07 60.5 69 43.5
Psat2g160520 Pisum sativum HOM05D002852 ORTHO05D003174 1.5e-07 60.1 56 50.0
Actinidia07674 Actinidia chinensis HOM05D003390 ORTHO05D004189 2.0e-07 59.7 69 46.4
Ah.09g232910 Amaranthus hybridus HOM05D003390 ORTHO05D004189 2.0e-07 59.7 72 43.1
ClCG01G024310 Citrullus lanatus HOM05D002096 ORTHO05D002203 2.0e-07 59.7 69 44.9
Lsat_1_v5_gn_1_113160 Lactuca sativa HOM05D002852 ORTHO05D003174 2.0e-07 59.7 110 39.1
QL05p060145 Quercus lobata HOM05D002852 ORTHO05D003174 2.0e-07 59.7 66 45.5
Hund21491 Selenicereus undatus HOM05D002852 ORTHO05D003174 2.0e-07 59.7 69 44.9
CsaV3_6G051460 Cucumis sativus L. HOM05D002852 ORTHO05D003174 2.6e-07 59.3 79 39.2
MBI10_g42734_MAGBIO Magnolia biondii HOM05D002852 ORTHO05D003174 2.6e-07 59.3 69 43.5
CANSAT35G1426 Cannabis sativa HOM05D002852 ORTHO05D003174 4.4e-07 58.5 69 44.9
MD16G1203200 Malus domestica HOM05D002852 ORTHO05D003174 4.4e-07 58.5 66 47.0
MELO3C007160.2 Cucumis melo HOM05D002852 ORTHO05D003174 5.7e-07 58.2 69 43.5
QL05p060101 Quercus lobata HOM05D002852 ORTHO05D003174 5.7e-07 58.2 66 43.9
arahy.Tifrunner.gnm1.ann1.Q66JQI Arachis hypogaea HOM05D002852 ORTHO05D026880 7.5e-07 57.8 38 78.9
Sabra16G0232200 Salix brachista HOM05D002852 ORTHO05D003174 7.5e-07 57.8 107 37.4
SEGI_33155 Sequoiadendron giganteum HOM05D002852 ORTHO05D003174 7.5e-07 57.8 94 37.2
arahy.Tifrunner.gnm1.ann1.W5G7HT Arachis hypogaea HOM05D002852 ORTHO05D026880 1.3e-06 57.0 55 58.2
Potri.001G352800 Populus trichocarpa HOM05D002852 ORTHO05D003174 1.3e-06 57.0 69 43.5
TAR627G0278 Trochodendron aralioides HOM05D002852 ORTHO05D003174 3.7e-06 55.5 70 44.3
AagrBONN_evm.TU.Sc2ySwM_344.1690 Anthoceros agrestis HOM05D002852 ORTHO05D003174 6.3e-06 54.7 79 38.0
arahy.Tifrunner.gnm1.ann1.E1A0SA Arachis hypogaea HOM05D002852 ORTHO05D026880 6.3e-06 54.7 27 85.2
Lsat_1_v5_gn_7_29720 Lactuca sativa HOM05D002852 ORTHO05D003174 8.2e-06 54.3 66 42.4


User provided reference genes

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