Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 4.0e-108 394.8 204 100.0
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 1.4e-100 369.8 200 96.5
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 2.3e-95 352.4 198 93.4
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 6.8e-92 340.9 204 85.3
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 1.7e-87 326.2 241 74.7
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 2.3e-87 325.9 205 81.5
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 1.1e-86 323.6 204 81.4
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 2.5e-86 322.4 204 81.4
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 4.3e-86 321.6 205 81.0
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 1.6e-85 319.7 205 80.5
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 1.6e-85 319.7 205 78.5
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.4e-84 316.6 204 78.9
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 3.1e-84 315.5 204 78.4
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 3.1e-84 315.5 204 78.4
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 3.1e-84 315.5 198 82.3
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 4.0e-84 315.1 203 81.8
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 8.9e-84 313.9 190 83.2
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 2.6e-83 312.4 203 79.8
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 2.6e-83 312.4 204 77.5
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 3.4e-83 312.0 206 78.2
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 3.4e-83 312.0 190 81.6
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 3.4e-83 312.0 205 78.5
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 2.2e-82 309.3 204 78.4
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 2.9e-82 308.9 206 76.7
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 2.9e-82 308.9 206 76.7
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 4.9e-82 308.1 204 77.5
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 1.1e-81 307.0 204 77.9
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 1.4e-81 306.6 204 76.5
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 1.4e-81 306.6 204 77.0
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 1.4e-81 306.6 200 77.5
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 1.9e-81 306.2 205 78.5
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 2.4e-81 305.8 205 76.6
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 2.4e-81 305.8 188 81.9
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 4.1e-81 305.1 200 78.0
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 4.1e-81 305.1 204 77.0
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 5.4e-81 304.7 203 76.8
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 1.2e-80 303.5 196 78.6
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 1.2e-80 303.5 186 81.2
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 2.1e-80 302.8 205 75.6
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 2.7e-80 302.4 206 76.2
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 7.8e-80 300.8 205 75.6
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 7.8e-80 300.8 191 79.1
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 7.8e-80 300.8 191 79.1
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 7.8e-80 300.8 204 76.0
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.0e-79 300.4 204 75.5
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.0e-79 300.4 204 76.0
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 1.0e-79 300.4 205 76.6
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.0e-79 300.4 205 76.1
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 1.3e-79 300.1 186 80.6
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 1.7e-79 299.7 202 77.2
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 3.0e-79 298.9 189 78.8
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 3.9e-79 298.5 205 75.1
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 5.1e-79 298.1 203 74.4
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 5.1e-79 298.1 204 75.0
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.6e-79 297.7 204 75.5
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.6e-79 297.7 204 75.5
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 2.5e-78 295.8 197 76.1
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 3.3e-78 295.4 204 75.0
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 4.3e-78 295.0 187 81.8
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 5.6e-78 294.7 197 77.2
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 1.2e-77 293.5 204 72.5
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 1.2e-77 293.5 205 74.6
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 1.6e-77 293.1 200 75.0
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 3.6e-77 292.0 195 75.4
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 6.2e-77 291.2 203 74.4
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 6.2e-77 291.2 203 74.4
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 1.1e-76 290.4 190 80.5
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 1.1e-76 290.4 200 73.5
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 1.4e-76 290.0 188 77.1
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 1.4e-76 290.0 205 73.2
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 1.4e-76 290.0 191 77.5
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 2.4e-76 289.3 204 72.1
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 4.0e-76 288.5 204 72.5
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 5.2e-76 288.1 188 78.2
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 5.2e-76 288.1 189 79.4
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 6.8e-76 287.7 204 72.5
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 8.9e-76 287.3 204 72.5
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 8.9e-76 287.3 204 72.5
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 8.9e-76 287.3 204 72.5
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 1.5e-75 286.6 204 72.1
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 1.5e-75 286.6 204 71.6
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 2.6e-75 285.8 204 71.1
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 2.6e-75 285.8 230 66.5
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 2.6e-75 285.8 204 72.1
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 5.8e-75 284.6 205 72.2
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.7e-74 283.1 225 68.0
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 1.7e-74 283.1 198 73.2
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 7.1e-73 277.7 190 74.2
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 9.3e-73 277.3 203 70.0
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 6.0e-72 274.6 174 79.3
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 1.0e-71 273.9 227 67.0
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 3.0e-71 272.3 204 70.6
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 8.7e-71 270.8 205 69.3
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 2.5e-70 269.2 182 74.2
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 8.1e-69 264.2 187 70.6
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 4.0e-68 261.9 207 64.7
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 5.8e-67 258.1 159 79.9
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 3.8e-66 255.4 314 48.4
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 4.2e-65 251.9 134 95.5
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 3.5e-64 248.8 165 75.8
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 1.2e-59 233.8 190 65.8
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 8.4e-58 227.6 132 85.6
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 1.1e-57 227.3 155 77.4
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 2.5e-54 216.1 119 94.1
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.5e-51 206.8 147 76.9
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 4.9e-50 201.8 116 88.8
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 4.9e-50 201.8 134 76.9
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 3.2e-49 199.1 134 79.1
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 7.9e-48 194.5 120 80.8
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 8.7e-47 191.0 105 90.5
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 1.3e-45 187.2 108 88.0
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 1.3e-45 187.2 151 63.6
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 7.4e-38 161.4 134 65.7
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.3e-34 150.6 92 78.3
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 1.9e-33 146.7 178 45.5
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 4.2e-33 145.6 184 46.2
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 1.8e-31 140.2 191 47.1
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 2.9e-26 122.9 138 47.8
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 2.1e-24 116.7 208 38.9
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 1.4e-23 114.0 185 39.5
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 1.5e-22 110.5 248 32.7
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.7e-16 89.7 48 95.8
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 7.0e-12 75.1 187 31.6
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 5.0e-10 68.9 71 49.3
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 2.1e-08 63.5 33 87.9
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 6.1e-08 62.0 51 60.8


User provided reference genes

Program Settings