Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 3.0e-87 325.5 207 100.0
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 3.0e-87 325.5 207 100.0
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 7.3e-41 171.4 219 56.6
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 1.2e-40 170.6 219 56.6
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 2.2e-37 159.8 221 49.3
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 6.4e-37 158.3 221 48.0
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 1.9e-36 156.8 226 48.7
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 3.2e-36 156.0 218 51.8
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.2e-35 154.1 217 52.1
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 6.6e-34 148.3 220 46.8
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 1.5e-33 147.1 223 46.2
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 5.6e-33 145.2 215 45.6
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 2.1e-32 143.3 220 46.4
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 5.8e-30 135.2 218 44.0
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 2.2e-29 133.3 210 41.4
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 2.2e-29 133.3 210 41.4
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 6.4e-29 131.7 218 46.8
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 8.3e-29 131.3 210 40.0
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 8.3e-29 131.3 219 48.9
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 5.1e-26 122.1 214 43.0
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 5.1e-26 122.1 216 39.8
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 8.6e-26 121.3 215 45.1
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 4.3e-25 119.0 214 40.2
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 9.5e-25 117.9 207 38.6
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 3.6e-24 115.9 219 38.4
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.4e-23 114.0 221 38.0
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 3.1e-23 112.8 219 38.4
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 6.8e-23 111.7 210 36.7
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 1.5e-22 110.5 205 42.4
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.5e-22 110.5 211 37.9
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.5e-22 110.5 211 37.9
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 1.5e-22 110.5 216 43.5
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 5.8e-22 108.6 219 34.2
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 5.8e-22 108.6 221 41.2
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 7.5e-22 108.2 220 38.2
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 9.9e-22 107.8 208 43.8
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 9.9e-22 107.8 210 38.1
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.3e-21 107.5 209 37.8
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.7e-21 107.1 209 37.3
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 1.7e-21 107.1 208 39.9
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 2.9e-21 106.3 210 38.6
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 3.7e-21 105.9 213 36.2
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.4e-21 105.1 209 36.8
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 8.3e-21 104.8 221 41.2
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 1.9e-20 103.6 209 34.0
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 3.2e-20 102.8 206 39.8
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 3.2e-20 102.8 214 37.4
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 1.6e-19 100.5 215 39.5
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 1.6e-19 100.5 215 39.5
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 2.1e-19 100.1 222 39.2
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 1.3e-18 97.4 209 34.9
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.7e-18 97.1 217 33.2
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.7e-18 97.1 216 34.3
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 1.7e-18 97.1 214 39.7
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 2.3e-18 96.7 222 32.0
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 3.0e-18 96.3 216 36.1
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 3.0e-18 96.3 217 32.3
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 6.6e-18 95.1 212 36.3
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 6.6e-18 95.1 210 35.2
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.1e-17 94.4 196 35.2
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 5.6e-17 92.0 148 41.9
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 5.6e-17 92.0 210 43.8
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 6.2e-16 88.6 210 34.8
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 1.8e-15 87.0 207 34.3
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 3.1e-15 86.3 211 38.9
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 5.2e-15 85.5 200 30.5
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 5.2e-15 85.5 209 34.4
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 5.2e-15 85.5 218 33.5
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 8.9e-15 84.7 132 38.6
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 1.2e-14 84.3 88 52.3
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 1.2e-14 84.3 216 32.9
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 1.5e-14 84.0 87 49.4
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 2.0e-14 83.6 183 32.2
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 2.0e-14 83.6 181 32.0
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 2.6e-14 83.2 208 37.5
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 3.4e-14 82.8 181 32.0
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 3.4e-14 82.8 95 46.3
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 4.4e-14 82.4 88 46.6
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 4.4e-14 82.4 47 74.5
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 5.8e-14 82.0 46 78.3
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 5.8e-14 82.0 87 47.1
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 5.8e-14 82.0 87 47.1
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 7.6e-14 81.6 208 35.1
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 9.9e-14 81.3 94 47.9
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 1.3e-13 80.9 183 31.7
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.3e-13 80.9 211 34.6
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.3e-13 80.9 178 30.9
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.3e-13 80.9 178 30.9
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 3.8e-13 79.3 87 47.1
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 6.4e-13 78.6 95 45.3
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 8.4e-13 78.2 95 45.3
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 1.1e-12 77.8 95 45.3
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 3.2e-12 76.3 92 44.6
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 3.2e-12 76.3 211 30.8
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 7.1e-12 75.1 92 58.7
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.2e-11 74.3 95 46.3
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 2.1e-11 73.6 210 31.4
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 2.7e-11 73.2 206 32.5
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 3.5e-11 72.8 94 45.7
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 6.0e-11 72.0 209 32.5
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 6.0e-11 72.0 43 72.1
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 7.8e-11 71.6 204 36.8
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 1.0e-10 71.2 87 43.7
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 2.3e-10 70.1 94 44.7
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 3.0e-10 69.7 43 69.8
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 6.6e-10 68.6 40 72.5
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 8.7e-10 68.2 41 68.3
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 1.1e-09 67.8 91 51.6
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.5e-09 67.4 43 67.4
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.9e-09 67.0 203 31.5
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 6.2e-08 62.0 34 70.6
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 1.1e-07 61.2 87 41.4
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 5.3e-07 58.9 89 38.2
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 4.4e-06 55.8 89 38.2
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 4.4e-06 55.8 39 59.0


User provided reference genes

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