Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 7.2e-65 250.4 122 100.0
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 7.8e-35 150.6 84 89.3
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 1.7e-34 149.4 83 90.4
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 8.6e-34 147.1 88 86.4
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 6.2e-32 141.0 89 82.0
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 1.0e-26 123.6 80 82.5
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 3.0e-26 122.1 80 72.5
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 9.6e-25 117.1 82 72.0
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 1.3e-24 116.7 86 65.1
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 8.1e-24 114.0 95 57.9
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 1.1e-23 113.6 79 68.4
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 1.1e-23 113.6 93 66.7
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 1.1e-23 113.6 82 64.6
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 1.8e-23 112.8 79 68.4
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 1.8e-23 112.8 84 69.0
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 2.4e-23 112.5 83 66.3
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 2.4e-23 112.5 82 65.9
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 4.0e-23 111.7 82 62.2
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 4.0e-23 111.7 83 62.7
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 4.0e-23 111.7 82 63.4
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 5.3e-23 111.3 83 60.2
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 5.3e-23 111.3 83 60.2
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 6.9e-23 110.9 79 70.9
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 1.2e-22 110.2 83 63.9
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 1.2e-22 110.2 96 61.5
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 1.2e-22 110.2 79 67.1
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 1.5e-22 109.8 82 65.9
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 1.5e-22 109.8 83 60.2
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 2.0e-22 109.4 83 62.7
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 3.4e-22 108.6 82 63.4
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 4.4e-22 108.2 79 64.6
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 4.4e-22 108.2 79 64.6
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 4.4e-22 108.2 82 64.6
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 4.4e-22 108.2 82 59.8
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 4.4e-22 108.2 83 61.4
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 5.8e-22 107.8 82 61.0
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 7.6e-22 107.5 74 77.0
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 7.6e-22 107.5 82 63.4
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 1.3e-21 106.7 82 57.3
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.3e-21 106.7 82 57.3
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.3e-21 106.7 82 57.3
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 1.3e-21 106.7 84 66.7
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 1.3e-21 106.7 80 66.2
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 1.7e-21 106.3 83 60.2
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 1.7e-21 106.3 76 68.4
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 2.9e-21 105.5 82 57.3
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 3.8e-21 105.1 87 59.8
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 3.8e-21 105.1 83 60.2
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 8.4e-21 104.0 82 56.1
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 1.4e-20 103.2 84 59.5
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 2.4e-20 102.4 82 57.3
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 3.2e-20 102.1 82 56.1
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 4.2e-20 101.7 78 65.4
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 7.1e-20 100.9 79 62.0
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 7.1e-20 100.9 82 54.9
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 9.3e-20 100.5 81 56.8
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 9.3e-20 100.5 88 56.8
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 9.3e-20 100.5 94 53.2
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 9.3e-20 100.5 94 53.2
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 1.2e-19 100.1 83 57.8
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 1.2e-19 100.1 83 55.4
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 1.2e-19 100.1 94 53.2
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 1.6e-19 99.8 79 62.0
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 2.1e-19 99.4 82 53.7
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 2.7e-19 99.0 82 54.9
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 3.5e-19 98.6 82 53.7
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 3.5e-19 98.6 94 53.2
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 4.6e-19 98.2 83 57.8
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 4.6e-19 98.2 88 54.5
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 4.6e-19 98.2 94 52.1
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 6.0e-19 97.8 98 48.0
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 6.0e-19 97.8 88 54.5
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 7.9e-19 97.4 79 55.7
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 7.9e-19 97.4 80 57.5
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 7.9e-19 97.4 83 56.6
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 7.9e-19 97.4 80 55.0
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 1.7e-18 96.3 94 51.1
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 3.0e-18 95.5 94 52.1
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 3.0e-18 95.5 80 58.8
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 3.9e-18 95.1 79 57.0
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 5.1e-18 94.7 82 59.8
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 6.6e-18 94.4 84 53.6
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 1.1e-17 93.6 101 49.5
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 1.9e-17 92.8 80 58.8
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 1.9e-17 92.8 82 57.3
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 2.5e-17 92.4 80 58.8
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 2.5e-17 92.4 85 51.8
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 2.5e-17 92.4 102 46.1
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 3.3e-17 92.0 81 54.3
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 4.3e-17 91.7 83 56.6
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 5.6e-17 91.3 80 56.2
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 7.3e-17 90.9 80 55.0
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 7.3e-17 90.9 80 55.0
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 7.3e-17 90.9 80 55.0
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 7.3e-17 90.9 80 55.0
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 7.3e-17 90.9 80 55.0
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 2.1e-16 89.4 80 53.8
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 4.8e-16 88.2 83 54.2
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 6.2e-16 87.8 62 64.5
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 1.1e-15 87.0 82 56.1
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 1.8e-15 86.3 80 55.0
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.8e-15 86.3 94 47.9
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 1.2e-14 83.6 44 90.9
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 1.2e-14 83.6 44 90.9
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 1.2e-14 83.6 44 90.9
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 3.4e-14 82.0 44 88.6
arahy.Tifrunner.gnm1.ann1.XV84RB Arachis hypogaea HOM05D000172 ORTHO05D008216 1.7e-13 79.7 44 88.6
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 6.4e-13 77.8 69 56.5
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 1.9e-12 76.3 91 48.4
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 3.5e-11 72.0 78 47.4
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 3.5e-11 72.0 82 42.7
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-09 66.2 62 51.6
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 3.7e-08 62.0 41 70.7
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 1.8e-07 59.7 68 44.1
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 1.8e-07 59.7 68 44.1
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 1.2e-06 57.0 49 57.1
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 1.2e-06 57.0 35 74.3
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 5.8e-06 54.7 76 35.5


User provided reference genes

Program Settings