Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 6.5e-134 480.7 241 100.0
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 5.9e-111 404.4 204 98.5
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 1.5e-101 373.2 205 89.3
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 1.9e-101 372.9 205 89.3
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 4.3e-101 371.7 205 89.3
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 9.5e-101 370.5 205 88.3
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 9.5e-101 370.5 205 88.8
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 9.5e-101 370.5 205 89.3
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 1.6e-100 369.8 203 89.2
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 4.7e-100 368.2 205 88.3
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 2.3e-99 365.9 203 88.2
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 5.2e-99 364.8 205 86.8
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 6.8e-99 364.4 205 87.8
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 2.0e-98 362.8 203 88.2
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 2.7e-95 352.4 203 84.2
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 7.8e-95 350.9 203 83.7
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.3e-94 349.4 204 81.9
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 6.6e-94 347.8 203 82.8
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.1e-93 347.1 203 83.3
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 4.3e-93 345.1 204 81.9
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 7.3e-93 344.4 205 81.0
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 7.3e-93 344.4 204 80.9
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 9.5e-93 344.0 206 81.6
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 2.1e-92 342.8 204 79.9
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 3.6e-92 342.0 206 81.1
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 8.1e-92 340.9 204 80.9
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 1.1e-91 340.5 204 79.4
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 1.4e-91 340.1 204 80.4
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 1.8e-91 339.7 206 78.6
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 1.8e-91 339.7 204 80.4
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.3e-91 339.3 204 80.4
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 4.0e-91 338.6 204 79.4
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 6.8e-91 337.8 206 79.6
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 3.4e-90 335.5 204 78.4
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 3.4e-90 335.5 203 80.8
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 3.4e-90 335.5 204 79.4
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 5.8e-90 334.7 204 79.9
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 5.8e-90 334.7 204 79.9
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 5.8e-90 334.7 206 77.7
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.3e-89 333.6 204 78.9
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 1.3e-89 333.6 204 78.4
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 4.9e-89 331.6 204 76.5
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 4.9e-89 331.6 204 76.5
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 8.3e-89 330.9 206 77.2
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 1.4e-88 330.1 206 76.2
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 2.4e-88 329.3 206 78.2
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 2.4e-88 329.3 204 78.4
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 3.2e-88 328.9 205 76.1
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 5.4e-88 328.2 205 75.6
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 7.1e-88 327.8 204 76.5
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 2.1e-87 326.2 205 76.1
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 3.5e-87 325.5 205 75.6
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 3.5e-87 325.5 206 77.7
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 4.6e-87 325.1 204 75.0
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 6.0e-87 324.7 206 74.8
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 6.0e-87 324.7 205 78.0
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 6.0e-87 324.7 205 77.6
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 6.0e-87 324.7 205 74.6
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 7.8e-87 324.3 205 77.1
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 1.7e-86 323.2 205 76.1
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 2.3e-86 322.8 203 76.4
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 2.3e-86 322.8 206 76.7
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 3.0e-86 322.4 205 74.1
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 3.0e-86 322.4 205 75.1
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 3.0e-86 322.4 205 75.6
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 5.1e-86 321.6 204 75.0
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 5.1e-86 321.6 205 75.6
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 8.6e-86 320.9 204 76.0
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.1e-85 320.5 204 74.5
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 1.9e-85 319.7 205 74.6
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 2.5e-85 319.3 204 76.5
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 4.3e-85 318.5 205 74.6
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 4.3e-85 318.5 205 76.1
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 4.3e-85 318.5 205 74.6
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 1.2e-84 317.0 204 76.0
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 2.1e-84 316.2 205 74.6
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 2.1e-84 316.2 204 75.0
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.8e-84 315.8 206 76.7
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 2.8e-84 315.8 204 75.0
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 3.6e-84 315.5 204 76.0
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 6.2e-84 314.7 205 73.7
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 8.1e-84 314.3 204 73.5
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 8.1e-84 314.3 205 74.1
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.1e-83 313.9 204 73.5
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 1.1e-83 313.9 205 73.7
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 1.1e-83 313.9 205 74.1
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 1.8e-83 313.2 201 75.1
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 2.3e-83 312.8 205 73.7
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 3.1e-83 312.4 204 74.5
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 5.2e-83 311.6 205 73.7
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 6.8e-83 311.2 203 76.8
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 8.9e-83 310.8 205 73.2
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 1.5e-82 310.1 203 76.4
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 1.5e-82 310.1 201 74.1
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 1.5e-82 310.1 200 73.5
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 2.0e-82 309.7 205 73.7
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 2.6e-82 309.3 204 72.5
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 1.7e-81 306.6 205 73.2
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 1.7e-81 306.6 204 72.5
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 2.2e-81 306.2 205 72.7
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 6.4e-81 304.7 176 82.4
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 2.4e-80 302.8 235 64.7
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 1.2e-79 300.4 205 71.2
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.6e-79 300.1 185 78.4
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 2.5e-77 292.7 193 75.1
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 1.2e-76 290.4 203 68.0
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 2.6e-74 282.7 204 66.2
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 4.9e-73 278.5 206 66.0
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 2.4e-72 276.2 214 66.8
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 7.3e-69 264.6 206 62.1
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 1.3e-68 263.8 208 63.5
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 6.2e-68 261.5 176 69.9
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 6.9e-67 258.1 204 63.2
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 5.8e-66 255.0 206 59.7
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 3.6e-60 235.7 179 69.3
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 6.2e-60 235.0 144 78.5
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 1.5e-58 230.3 218 54.6
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 1.3e-57 227.3 202 55.4
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 6.4e-57 224.9 203 55.2
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 3.7e-52 209.1 208 51.9
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 2.4e-51 206.5 133 77.4
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 1.2e-50 204.1 182 56.6
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 2.6e-50 203.0 119 79.0
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 5.5e-48 195.3 213 44.6
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 2.3e-46 189.9 145 66.9
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 9.6e-45 184.5 131 70.2
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 4.1e-43 179.1 225 36.9
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 6.9e-43 178.3 109 80.7
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 9.7e-37 157.9 209 40.2
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.6e-31 140.6 130 56.2
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 2.2e-28 130.2 78 82.1
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 1.8e-27 127.1 71 87.3
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 3.2e-24 116.3 104 54.8
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 4.2e-24 115.9 88 69.3
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 1.2e-18 97.8 108 40.7
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 6.1e-15 85.5 54 75.9
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 1.1e-11 74.7 44 77.3
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 7.0e-11 72.0 39 89.7
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 1.3e-09 67.8 249 30.9
SGA_v2.0_scaffold250G44984 Striga asiatica HOM05D005616 ORTHO05D401959 1.4e-06 57.8 60 51.7


User provided reference genes

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