Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 1.5e-245 852.4 440 100.0
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 3.1e-190 668.7 407 88.2
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.3e-180 636.7 391 87.7
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.9e-171 606.3 371 88.9
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 1.8e-118 430.3 395 61.0
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 2.1e-114 416.8 379 61.7
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 5.2e-113 412.1 382 60.7
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 3.4e-112 409.5 382 59.7
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 1.4e-110 404.1 379 60.9
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 2.3e-100 370.2 396 54.5
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 6.8e-97 358.6 405 52.1
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 6.8e-97 358.6 378 54.8
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 6.4e-95 352.1 392 52.8
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 8.3e-95 351.7 399 52.1
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 2.4e-94 350.1 403 51.1
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 9.2e-94 348.2 389 50.9
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 1.3e-92 344.4 414 46.9
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 3.0e-92 343.2 401 49.6
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 5.1e-92 342.4 394 50.8
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 8.6e-92 341.7 403 47.6
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 7.3e-91 338.6 404 50.7
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 1.3e-87 327.8 407 46.4
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 1.7e-87 327.4 399 49.1
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 2.2e-87 327.0 389 50.1
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 2.9e-87 326.6 399 47.9
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 4.9e-87 325.9 422 47.9
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 1.9e-86 323.9 400 48.8
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 1.6e-85 320.9 401 47.6
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 3.5e-85 319.7 401 46.4
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 6.0e-85 318.9 401 47.6
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 7.8e-85 318.5 400 47.5
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 1.3e-84 317.8 390 47.7
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 2.3e-84 317.0 398 46.5
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 3.0e-84 316.6 390 48.7
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 3.0e-84 316.6 393 47.8
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 2.4e-81 307.0 404 47.0
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 2.4e-81 307.0 389 46.5
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 3.1e-81 306.6 420 45.5
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 4.0e-81 306.2 396 46.7
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 5.2e-81 305.8 396 47.5
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 1.5e-80 304.3 390 46.2
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 4.4e-80 302.8 408 44.4
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 7.6e-80 302.0 407 44.0
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 3.8e-79 299.7 401 43.4
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 1.1e-78 298.1 354 48.6
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 1.2e-77 294.7 390 46.2
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 1.2e-77 294.7 403 44.7
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 4.6e-77 292.7 381 45.1
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 2.3e-76 290.4 400 42.8
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 2.3e-76 290.4 396 43.7
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 5.1e-76 289.3 390 42.8
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 8.1e-74 282.0 402 43.8
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 2.4e-73 280.4 426 41.5
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 9.0e-73 278.5 416 42.8
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 1.2e-72 278.1 401 44.1
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 1.2e-72 278.1 344 48.5
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 2.0e-72 277.3 400 43.2
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 5.8e-72 275.8 394 43.1
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 9.9e-72 275.0 403 42.9
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 1.7e-71 274.2 405 42.2
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 2.2e-71 273.9 408 42.2
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 2.9e-71 273.5 466 40.6
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.9e-71 272.7 403 42.7
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 6.4e-71 272.3 407 42.8
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 8.4e-71 271.9 411 41.8
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 1.9e-70 270.8 405 42.5
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 3.5e-69 266.5 363 43.3
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 4.6e-69 266.2 405 42.5
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 6.0e-69 265.8 406 42.4
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 7.9e-69 265.4 426 42.0
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.0e-68 265.0 421 41.3
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 1.7e-68 264.2 400 41.2
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 2.3e-68 263.8 390 42.8
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 1.1e-67 261.5 388 41.8
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 7.3e-67 258.8 391 40.2
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 2.1e-66 257.3 367 43.3
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 2.1e-66 257.3 392 41.1
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 2.8e-66 256.9 392 41.1
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 4.8e-66 256.1 403 42.4
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 8.1e-66 255.4 395 40.8
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 5.3e-65 252.7 387 40.3
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 5.3e-65 252.7 339 44.5
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.5e-64 251.1 393 40.2
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 1.5e-64 251.1 399 41.1
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 2.6e-64 250.4 388 40.7
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 3.4e-64 250.0 391 39.9
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 3.4e-64 250.0 391 39.9
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 5.8e-64 249.2 407 38.8
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 7.6e-64 248.8 391 39.6
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 1.7e-63 247.7 388 40.5
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 2.2e-63 247.3 393 40.7
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 2.2e-63 247.3 390 40.3
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 3.8e-63 246.5 279 50.9
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 4.9e-63 246.1 405 39.8
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 4.9e-63 246.1 397 38.8
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 1.4e-62 244.6 401 40.4
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 1.4e-62 244.6 392 40.6
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 1.4e-62 244.6 393 40.7
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 3.5e-61 240.0 399 38.8
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 7.9e-61 238.8 394 39.1
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 1.8e-60 237.7 411 39.2
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 5.6e-59 232.6 310 44.8
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 9.6e-59 231.9 409 37.9
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 1.3e-58 231.5 415 37.8
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 8.1e-58 228.8 409 38.1
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 6.9e-57 225.7 346 38.7
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 8.4e-55 218.8 242 50.0
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 3.2e-54 216.9 402 38.3
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 1.6e-53 214.5 385 39.0
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 7.9e-53 212.2 397 38.3
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 1.8e-52 211.1 376 40.2
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 2.3e-52 210.7 387 36.2
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 3.0e-52 210.3 299 44.5
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 7.4e-51 205.7 233 48.5
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 1.4e-49 201.4 223 48.4
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 1.5e-48 198.0 391 34.8
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 1.4e-46 191.4 428 32.9
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 9.3e-46 188.7 440 32.7
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.3e-44 184.9 404 34.4
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 1.3e-42 178.3 390 35.1
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 1.6e-42 177.9 418 32.1
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 8.5e-39 165.6 334 35.3
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 7.2e-38 162.5 322 33.9
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 3.3e-35 153.7 261 36.4
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 4.5e-32 143.3 404 29.7
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 1.3e-31 141.7 388 30.4
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 2.9e-31 140.6 347 32.9
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 9.4e-30 135.6 298 32.2
arahy.Tifrunner.gnm1.ann1.X2DDWJ Arachis hypogaea HOM05D001074 ORTHO05D038832 6.1e-29 132.9 81 85.2
arahy.Tifrunner.gnm1.ann1.674JY7 Arachis hypogaea HOM05D004671 ORTHO05D038832 6.7e-28 129.4 79 86.1
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 1.4e-25 121.7 227 37.4
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 4.1e-25 120.2 367 30.2
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 1.6e-24 118.2 161 41.6
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 2.6e-24 117.5 161 41.0
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 1.5e-22 111.7 126 46.8
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 5.7e-19 99.8 152 36.2
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 2.8e-18 97.4 193 32.1
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 2.0e-16 91.3 300 26.0
AL5G14400 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 3.4e-11 73.9 257 28.0
HanXRQChr06g0163721 Helianthus annuus HOM05D004671 ORTHO05D005638 7.2e-06 56.2 90 44.4


User provided reference genes

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