Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R57INB Arachis hypogaea HOM05D000290 ORTHO05D002418 2.2e-79 298.9 150 100.0
arahy.Tifrunner.gnm1.ann1.S3R8GT Arachis hypogaea HOM05D000290 ORTHO05D002418 1.0e-15 87.4 50 80.0
arahy.Tifrunner.gnm1.ann1.T0HPDF Arachis hypogaea HOM05D000290 ORTHO05D002418 1.0e-15 87.4 50 80.0
Phvul.002G264200 Phaseolus vulgaris HOM05D000290 ORTHO05D002418 3.8e-15 85.5 50 78.0
Ca_17701_v3 Cicer arietinum L. HOM05D000290 ORTHO05D002418 5.0e-15 85.1 50 76.0
Hma1.2p1_0070F.1_g037540 Hydrangea macrophylla HOM05D000290 ORTHO05D002418 6.5e-15 84.7 50 76.0
THA.LOC104799212 Tarenaya hassleriana HOM05D000290 ORTHO05D002418 6.5e-15 84.7 50 76.0
Lj4g0021892 Lotus japonicus HOM05D000290 ORTHO05D002418 8.5e-15 84.3 50 76.0
Lalb_Chr12g0203571 Lupinus albus HOM05D000290 ORTHO05D002418 8.5e-15 84.3 50 76.0
Medtr8g091710 Medicago truncatula HOM05D000290 ORTHO05D002418 8.5e-15 84.3 50 76.0
PGR004G2785 Punica granatum HOM05D000290 ORTHO05D002418 8.5e-15 84.3 50 76.0
MSTRG.3805 Avicennia marina HOM05D000290 ORTHO05D002418 1.1e-14 84.0 50 76.0
Glyma.04G220200 Glycine max HOM05D000290 ORTHO05D002418 1.1e-14 84.0 50 76.0
Glyma.06G145700 Glycine max HOM05D000290 ORTHO05D002418 1.1e-14 84.0 50 76.0
Lj1g0021046 Lotus japonicus HOM05D000290 ORTHO05D002418 1.1e-14 84.0 50 76.0
Sc16g0004190 Simmondsia chinensis HOM05D000290 ORTHO05D002418 1.1e-14 84.0 50 74.0
Glyma.05G183100 Glycine max HOM05D000290 ORTHO05D002418 1.4e-14 83.6 50 74.0
Psat7g051880 Pisum sativum HOM05D000290 ORTHO05D002418 1.4e-14 83.6 50 74.0
EL10Ac6g14732 Beta vulgaris HOM05D000290 ORTHO05D002418 1.9e-14 83.2 50 74.0
Dinv42708 Davidia involucrata HOM05D000290 ORTHO05D002418 1.9e-14 83.2 50 74.0
SalBow5G0667 Salvia bowleyana HOM05D000290 ORTHO05D002418 1.9e-14 83.2 50 74.0
vmacro18626 Vaccinium macrocarpon HOM05D000290 ORTHO05D002418 1.9e-14 83.2 50 74.0
Glyma.08G140900 Glycine max HOM05D000290 ORTHO05D002418 2.5e-14 82.8 50 74.0
Gohir.A02G133800 Gossypium hirsutum HOM05D000290 ORTHO05D002418 2.5e-14 82.8 50 74.0
Gohir.D03G045200 Gossypium hirsutum HOM05D000290 ORTHO05D002418 2.5e-14 82.8 50 74.0
Gorai.003G046300 Gossypium raimondii HOM05D000290 ORTHO05D002418 2.5e-14 82.8 50 74.0
VMungo0251G3264 Vigna mungo HOM05D000290 ORTHO05D002418 2.5e-14 82.8 50 74.0
COL.COLO4_11033 Corchorus olitorius HOM05D000290 ORTHO05D002418 3.2e-14 82.4 50 74.0
Duzib147G0442 Durio zibethinus HOM05D000290 ORTHO05D002418 3.2e-14 82.4 50 74.0
Potri.007G082500 Populus trichocarpa HOM05D000290 ORTHO05D002418 3.2e-14 82.4 50 74.0
Hund03547 Selenicereus undatus HOM05D000290 ORTHO05D002418 3.2e-14 82.4 50 74.0
Thecc.01G110800 Theobroma cacao HOM05D000290 ORTHO05D002418 3.2e-14 82.4 50 74.0
CiPaw.03G135100 Carya illinoinensis HOM05D000290 ORTHO05D002418 5.5e-14 81.6 50 72.0
ClCG01G019260 Citrullus lanatus HOM05D000290 ORTHO05D002418 5.5e-14 81.6 50 70.0
Ciclev10024947m.g Citrus clementina HOM05D000290 ORTHO05D002418 5.5e-14 81.6 50 72.0
Haze_25028 Corylus avellana HOM05D000290 ORTHO05D002418 5.5e-14 81.6 50 72.0
Lalb_Chr13g0296171 Lupinus albus HOM05D000290 ORTHO05D002418 5.5e-14 81.6 50 72.0
Manes.12G141200 Manihot esculenta HOM05D000290 ORTHO05D002418 5.5e-14 81.6 50 74.0
Peaxi162Scf01006g00026 Petunia axillaris HOM05D000290 ORTHO05D002418 5.5e-14 81.6 50 72.0
Phvul.009G140366 Phaseolus vulgaris HOM05D000290 ORTHO05D002418 5.5e-14 81.6 44 84.1
SalBow6G0294 Salvia bowleyana HOM05D000290 ORTHO05D002418 5.5e-14 81.6 50 72.0
SalBow6G4085 Salvia bowleyana HOM05D000290 ORTHO05D002418 5.5e-14 81.6 50 72.0
Ah.03g149280 Amaranthus hybridus HOM05D000290 ORTHO05D002418 7.2e-14 81.3 50 72.0
CiPaw.04G092900 Carya illinoinensis HOM05D000290 ORTHO05D002418 7.2e-14 81.3 50 72.0
DCAR_011445 Daucus carota HOM05D000290 ORTHO05D002418 7.2e-14 81.3 50 72.0
Eucgr.H04831 Eucalyptus grandis HOM05D000290 ORTHO05D002418 7.2e-14 81.3 50 76.0
Nitab4.5_0000156g0150 Nicotiana tabacum HOM05D000290 ORTHO05D002418 7.2e-14 81.3 50 72.0
Oeu028382.3 Olea europaea HOM05D000290 ORTHO05D002418 7.2e-14 81.3 50 72.0
Sabra05G0068300 Salix brachista HOM05D000290 ORTHO05D002418 7.2e-14 81.3 50 74.0
unitig_0.g1736 Utricularia gibba HOM05D000290 ORTHO05D002418 7.2e-14 81.3 50 72.0
GSVIVG01022210001 Vitis vinifera HOM05D000290 ORTHO05D002418 7.2e-14 81.3 50 72.0
Atru.chr4.398 Acer truncatum HOM05D000290 ORTHO05D002418 9.3e-14 80.9 50 70.0
CDE05G1393 Ceratophyllum demersum HOM05D001902 ORTHO05D002418 9.3e-14 80.9 50 72.0
Cc07_g16030 Coffea canephora HOM05D000290 ORTHO05D002418 9.3e-14 80.9 50 72.0
MELO3C007801.2 Cucumis melo HOM05D000290 ORTHO05D002418 9.3e-14 80.9 50 70.0
CsaV3_6G045940 Cucumis sativus L. HOM05D000290 ORTHO05D002418 9.3e-14 80.9 50 70.0
Lsat_1_v5_gn_2_67600 Lactuca sativa HOM05D000290 ORTHO05D002418 9.3e-14 80.9 50 70.0
MD01G1017900 Malus domestica HOM05D000290 ORTHO05D002418 9.3e-14 80.9 50 70.0
Rhsim08G0007800 Rhododendron simsii HOM05D000290 ORTHO05D002418 9.3e-14 80.9 50 72.0
CAN.G267.22 Capsicum annuum HOM05D000290 ORTHO05D002418 1.2e-13 80.5 50 70.0
CARHR293830 Cardamine hirsuta HOM05D000290 ORTHO05D002418 1.2e-13 80.5 50 70.0
MD15G1334400 Malus domestica HOM05D000290 ORTHO05D002418 1.2e-13 80.5 50 70.0
Nn5g28931 Nelumbo nucifera HOM05D000290 ORTHO05D002418 1.2e-13 80.5 50 70.0
Sed0011702 Sechium edule HOM05D000290 ORTHO05D002418 1.2e-13 80.5 50 70.0
Solyc04g054190.3 Solanum lycopersicum HOM05D000290 ORTHO05D002418 1.2e-13 80.5 50 70.0
Sopen04g023660 Solanum pennellii HOM05D000290 ORTHO05D002418 1.2e-13 80.5 50 70.0
ATR0564G333 Amborella trichopoda HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
AL8G42440 Arabidopsis lyrata HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
AT5G64940 Arabidopsis thaliana HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
BcaB02g09843 Brassica carinata HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
BcaC01g02725 Brassica carinata HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
A06p31730 Brassica napus HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
BolC3t18386H Brassica oleracea HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
BraA06t26106Z Brassica rapa HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
CSS0019128 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
Carub.0008s2577 Capsella rubella HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
CDE05G2915 Ceratophyllum demersum HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 72.0
Lj2A562G40 Lonicera japonica HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
Potri.005G083200 Populus trichocarpa HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 72.0
Sp2g28020 Schrenkiella parvula HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 70.0
TPR.G23736 Trifolium pratense HOM05D000290 ORTHO05D002418 1.6e-13 80.1 50 72.0
Actinidia28887 Actinidia chinensis HOM05D000290 ORTHO05D002418 2.1e-13 79.7 50 70.0
Aqoxy6G00498 Aquilegia oxysepala HOM05D000290 ORTHO05D002418 2.1e-13 79.7 50 68.0
Medtr3g094740 Medicago truncatula HOM05D000290 ORTHO05D002418 2.1e-13 79.7 50 72.0
Oeu021437.1 Olea europaea HOM05D000290 ORTHO05D002418 2.1e-13 79.7 50 70.0
Prupe.6G175300 Prunus persica HOM05D000290 ORTHO05D002418 2.1e-13 79.7 50 66.0
Sabra07G0069100 Salix brachista HOM05D000290 ORTHO05D002418 2.1e-13 79.7 50 72.0
TWI77G0161 Tripterygium wilfordii HOM05D000290 ORTHO05D002418 2.1e-13 79.7 50 70.0
CANSAT01G1322 Cannabis sativa HOM05D000290 ORTHO05D002418 2.7e-13 79.3 50 68.0
AUR62003319 Chenopodium quinoa HOM05D000290 ORTHO05D002418 2.7e-13 79.3 50 70.0
AUR62016263 Chenopodium quinoa HOM05D000290 ORTHO05D002418 2.7e-13 79.3 50 70.0
Ca_16887_v3 Cicer arietinum L. HOM05D000290 ORTHO05D002418 2.7e-13 79.3 50 72.0
Dinv19505 Davidia involucrata HOM05D000290 ORTHO05D002418 2.7e-13 79.3 50 66.0
ECA238G4461 Erigeron canadensis HOM05D000290 ORTHO05D002418 2.7e-13 79.3 50 68.0
PSO675G7818 Papaver somniferum HOM05D000290 ORTHO05D002418 2.7e-13 79.3 50 70.0
Psat5g067200 Pisum sativum HOM05D000290 ORTHO05D002418 2.7e-13 79.3 50 72.0
SGA_v2.0_scaffold47G17723 Striga asiatica HOM05D000290 ORTHO05D002418 2.7e-13 79.3 50 70.0
QL06p032420 Quercus lobata HOM05D000290 ORTHO05D002418 3.6e-13 79.0 50 68.0
HanXRQChr15g0471941 Helianthus annuus HOM05D000290 ORTHO05D002418 6.1e-13 78.2 50 70.0
Os02g0575500 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D002418 6.1e-13 78.2 50 68.0
TWI74G1368 Tripterygium wilfordii HOM05D000290 ORTHO05D002418 6.1e-13 78.2 50 68.0
TAR628G0248 Trochodendron aralioides HOM05D000290 ORTHO05D002418 6.1e-13 78.2 50 68.0
HanXRQChr14g0446221 Helianthus annuus HOM05D000290 ORTHO05D002418 7.9e-13 77.8 50 68.0
FvH4_1g22080 Fragaria vesca HOM05D000290 ORTHO05D002418 1.4e-12 77.0 50 70.0
FAN19G1951 Fragaria x ananassa HOM05D000290 ORTHO05D002418 1.4e-12 77.0 50 70.0
FAN23G0918 Fragaria x ananassa HOM05D000290 ORTHO05D002418 1.4e-12 77.0 50 70.0
FAN28G0415 Fragaria x ananassa HOM05D000290 ORTHO05D002418 1.4e-12 77.0 50 70.0
RcHm_v2.0_Chr2g0116161 Rosa chinensis HOM05D000290 ORTHO05D002418 1.4e-12 77.0 50 70.0
FAN26G1302 Fragaria x ananassa HOM05D000290 ORTHO05D002418 1.8e-12 76.6 50 70.0
C03p61250 Brassica napus HOM05D000290 ORTHO05D002418 2.3e-12 76.3 43 76.7
Aa31LG1G17030 Aethionema arabicum HOM05D000290 ORTHO05D002418 3.0e-12 75.9 50 64.0
Migut.H02416 Erythranthe guttata HOM05D000290 ORTHO05D002418 3.0e-12 75.9 50 64.0
CBR_g4041 Chara braunii HOM05D000290 ORTHO05D002418 5.1e-12 75.1 47 70.2
SMO361G0768 Selaginella moellendorffii HOM05D000290 ORTHO05D002418 1.5e-11 73.6 48 68.8
HPP92_016464 Vanilla planifolia HOM05D000290 ORTHO05D002418 1.5e-11 73.6 50 62.0
HPP92_027145 Vanilla planifolia HOM05D000290 ORTHO05D002418 1.5e-11 73.6 50 62.0
Mapoly0001s0423 Marchantia polymorpha HOM05D000290 ORTHO05D002418 1.9e-11 73.2 50 64.0
AagrBONN_evm.TU.Sc2ySwM_344.1524 Anthoceros agrestis HOM05D000290 ORTHO05D002418 2.5e-11 72.8 50 60.0
SEGI_37604 Sequoiadendron giganteum HOM05D000290 ORTHO05D002418 2.5e-11 72.8 43 72.1
Zm00001eb244840 Zea mays HOM05D000290 ORTHO05D002418 3.3e-11 72.4 50 64.0
Thhalv10003690m.g Eutrema salsugineum HOM05D000290 ORTHO05D002418 1.7e-10 70.1 39 76.9
Pp3c15_3930 Physcomitrium patens HOM05D000290 ORTHO05D002418 1.1e-09 67.4 50 62.0
Pp3c9_4350 Physcomitrium patens HOM05D000290 ORTHO05D002418 1.5e-08 63.5 50 58.0
Nitab4.5_0004814g0010 Nicotiana tabacum HOM05D000290 ORTHO05D002418 4.2e-06 55.5 50 58.0


User provided reference genes

Program Settings