Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R4WAY0 Arachis hypogaea HOM05D009629 ORTHO05D012066 2.9e-31 137.9 67 100.0
arahy.Tifrunner.gnm1.ann1.VT0F5H Arachis hypogaea HOM05D009629 ORTHO05D012066 2.0e-24 115.2 71 84.5
arahy.Tifrunner.gnm1.ann1.5430DM Arachis hypogaea HOM05D009629 ORTHO05D012066 2.6e-24 114.8 72 86.1
Gorai.001G164600 Gossypium raimondii HOM05D006493 ORTHO05D009864 8.4e-23 109.8 71 83.1
LjContig00439g0014425 Lotus japonicus HOM05D009629 ORTHO05D012066 1.1e-19 99.4 50 98.0
LjContig00439g0026016 Lotus japonicus HOM05D009629 ORTHO05D012066 1.1e-19 99.4 50 98.0
Lalb_Chr00c29g0407961 Lupinus albus HOM05D009629 ORTHO05D012066 1.1e-19 99.4 50 98.0
Lalb_Chr10g0094551 Lupinus albus HOM05D009629 ORTHO05D012066 1.1e-19 99.4 50 98.0
Lalb_Chr10g0094581 Lupinus albus HOM05D009629 ORTHO05D012066 1.1e-19 99.4 50 98.0
TPR.G40153 Trifolium pratense HOM05D009629 ORTHO05D012066 1.1e-19 99.4 50 98.0
HanXRQMTg0579061 Helianthus annuus HOM05D009629 ORTHO05D012066 5.6e-19 97.1 50 96.0
Gohir.A01G165350 Gossypium hirsutum HOM05D009629 ORTHO05D012066 1.6e-18 95.5 71 73.2
PGR069G0009 Punica granatum HOM05D006493 ORTHO05D009864 1.6e-18 95.5 50 96.0
SGA_v2.0_scaffold255G45359 Striga asiatica HOM05D009629 ORTHO05D012066 2.1e-18 95.1 50 94.0
Nitab4.5_0000172g0110 Nicotiana tabacum HOM05D009629 ORTHO05D012066 4.8e-18 94.0 49 93.9
Potri.007G062482 Populus trichocarpa HOM05D009629 ORTHO05D012066 6.2e-18 93.6 50 94.0
Ah.10g028490 Amaranthus hybridus HOM05D006493 ORTHO05D009864 1.4e-17 92.4 48 95.8
Lalb_Chr25g0283131 Lupinus albus HOM05D009629 ORTHO05D012066 2.4e-17 91.7 50 90.0
TPR.G26786 Trifolium pratense HOM05D009629 ORTHO05D012066 5.3e-17 90.5 49 89.8
A04p09390 Brassica napus HOM05D009629 ORTHO05D012066 1.5e-16 89.0 50 90.0
BolSC28t60314H Brassica oleracea HOM05D009629 ORTHO05D012066 1.5e-16 89.0 50 90.0
BraSC159t45729Z Brassica rapa HOM05D009629 ORTHO05D012066 1.5e-16 89.0 50 90.0
BraSC48t46329Z Brassica rapa HOM05D009629 ORTHO05D012066 1.5e-16 89.0 50 90.0
Solyc10g062050.1 Solanum lycopersicum HOM05D009629 ORTHO05D012066 5.5e-14 80.5 47 83.0
Nitab4.5_0008300g0010 Nicotiana tabacum HOM05D000435 ORTHO05D013824 3.9e-12 74.3 45 77.8
Nitab4.5_0000085g0140 Nicotiana tabacum HOM05D009629 ORTHO05D012066 1.5e-11 72.4 51 72.5
Nitab4.5_0000172g1540 Nicotiana tabacum HOM05D006493 ORTHO05D009864 5.3e-09 63.9 38 78.9
Lalb_Chr16g0390161 Lupinus albus HOM05D009629 ORTHO05D012066 6.9e-09 63.5 35 88.6


User provided reference genes

Program Settings