Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R45IF4 Arachis hypogaea HOM05D006046 ORTHO05D007580 2.7e-52 208.4 105 100.0
arahy.Tifrunner.gnm1.ann1.45WRUP Arachis hypogaea HOM05D006046 ORTHO05D007580 8.8e-35 150.2 83 89.2
Glyma.10G138600 Glycine max HOM05D006046 ORTHO05D007580 7.4e-34 147.1 99 67.7
arahy.Tifrunner.gnm1.ann1.W5PTGQ Arachis hypogaea HOM05D006046 ORTHO05D007580 2.2e-33 145.6 76 94.7
arahy.Tifrunner.gnm1.ann1.X26H0K Arachis hypogaea HOM05D006046 ORTHO05D007580 2.2e-33 145.6 92 81.5
VMungo0720G0414 Vigna mungo HOM05D006046 ORTHO05D007580 2.8e-33 145.2 99 68.7
Lalb_Chr02g0147181 Lupinus albus HOM05D006046 ORTHO05D007580 6.3e-33 144.1 98 68.4
Phvul.007G208700 Phaseolus vulgaris HOM05D006046 ORTHO05D007580 6.3e-33 144.1 95 70.5
Medtr1g085730 Medicago truncatula HOM05D006046 ORTHO05D007580 1.8e-32 142.5 98 66.3
TPR.G3061 Trifolium pratense HOM05D006046 ORTHO05D007580 2.4e-32 142.1 98 66.3
arahy.Tifrunner.gnm1.ann1.01TYUM Arachis hypogaea HOM05D006046 ORTHO05D007580 4.1e-32 141.4 95 66.3
arahy.Tifrunner.gnm1.ann1.11DDVR Arachis hypogaea HOM05D006046 ORTHO05D007580 4.1e-32 141.4 95 66.3
Lj5g0023586 Lotus japonicus HOM05D006046 ORTHO05D007580 4.1e-32 141.4 98 68.4
GSVIVG01028241001 Vitis vinifera HOM05D006046 ORTHO05D007580 1.6e-31 139.4 98 66.3
Ca_10238_v3 Cicer arietinum L. HOM05D006046 ORTHO05D007580 2.0e-31 139.0 98 66.3
Lalb_Chr21g0309871 Lupinus albus HOM05D006046 ORTHO05D007580 2.6e-31 138.7 98 66.3
Psat6g158600 Pisum sativum HOM05D006046 ORTHO05D007580 5.9e-31 137.5 98 65.3
CiPaw.07G126200 Carya illinoinensis HOM05D006046 ORTHO05D007580 7.7e-31 137.1 98 64.3
Gohir.A11G105300 Gossypium hirsutum HOM05D006046 ORTHO05D007580 7.7e-31 137.1 98 63.3
QL12p035018 Quercus lobata HOM05D006046 ORTHO05D007580 7.7e-31 137.1 98 66.3
Gohir.D11G110200 Gossypium hirsutum HOM05D006046 ORTHO05D007580 1.3e-30 136.3 98 63.3
Gorai.007G117800 Gossypium raimondii HOM05D006046 ORTHO05D007580 1.3e-30 136.3 98 63.3
COL.COLO4_23120 Corchorus olitorius HOM05D006046 ORTHO05D007580 3.8e-30 134.8 98 62.2
Duzib133G1070 Durio zibethinus HOM05D006046 ORTHO05D007580 8.5e-30 133.7 98 62.2
PGR142G1127 Punica granatum HOM05D006046 ORTHO05D007580 1.9e-29 132.5 96 61.5
TWI59G0782 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 2.5e-29 132.1 98 60.2
CDE05G0285 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 3.2e-29 131.7 93 63.4
TAR633G1601 Trochodendron aralioides HOM05D006046 ORTHO05D007580 3.2e-29 131.7 98 63.3
Sed0026667 Sechium edule HOM05D006046 ORTHO05D007580 4.2e-29 131.3 93 64.5
Hma1.2p1_0408F.1_g146260 Hydrangea macrophylla HOM05D006046 ORTHO05D007580 5.5e-29 131.0 98 61.2
Cpa.g.sc57.26 Carica papaya HOM05D006046 ORTHO05D007580 7.2e-29 130.6 98 60.2
CDE11G0173 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 7.2e-29 130.6 93 63.4
Sabra02G0148500 Salix brachista HOM05D006046 ORTHO05D007580 7.2e-29 130.6 98 61.2
Thecc.01G326200 Theobroma cacao HOM05D006046 ORTHO05D007580 7.2e-29 130.6 98 60.2
Potri.002G186300 Populus trichocarpa HOM05D006046 ORTHO05D007580 9.4e-29 130.2 98 61.2
Potri.014G111600 Populus trichocarpa HOM05D006046 ORTHO05D007580 9.4e-29 130.2 98 60.2
Duzib138G1207 Durio zibethinus HOM05D006046 ORTHO05D007580 1.2e-28 129.8 98 60.2
Eucgr.K00558 Eucalyptus grandis HOM05D006046 ORTHO05D007580 1.2e-28 129.8 98 61.2
Oeu052589.3 Olea europaea HOM05D006046 ORTHO05D007580 1.2e-28 129.8 98 59.2
A10p01090 Brassica napus HOM05D006046 ORTHO05D007580 1.6e-28 129.4 98 60.2
Ciclev10019590m.g Citrus clementina HOM05D006046 ORTHO05D007580 1.6e-28 129.4 98 58.2
Lj1C7T2 Lonicera japonica HOM05D006046 ORTHO05D007580 1.6e-28 129.4 98 60.2
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 1.6e-28 129.4 95 62.1
THA.LOC104825927 Tarenaya hassleriana HOM05D006046 ORTHO05D007580 1.6e-28 129.4 98 59.2
ATR0796G090 Amborella trichopoda HOM05D006046 ORTHO05D007580 2.7e-28 128.6 95 61.1
BcaC05g24615 Brassica carinata HOM05D006046 ORTHO05D007580 3.6e-28 128.3 98 59.2
C05p01130 Brassica napus HOM05D006046 ORTHO05D007580 3.6e-28 128.3 98 59.2
BraA10t42387Z Brassica rapa HOM05D006046 ORTHO05D007580 3.6e-28 128.3 98 59.2
Actinidia21336 Actinidia chinensis HOM05D006046 ORTHO05D007580 6.1e-28 127.5 93 63.4
BolC5t28894H Brassica oleracea HOM05D006046 ORTHO05D007580 6.1e-28 127.5 98 59.2
AUR62040510 Chenopodium quinoa HOM05D006046 ORTHO05D007580 6.1e-28 127.5 94 66.0
Atru.chr5.852 Acer truncatum HOM05D006046 ORTHO05D007580 8.0e-28 127.1 98 58.2
MELO3C005189.2 Cucumis melo HOM05D006046 ORTHO05D007580 8.0e-28 127.1 93 64.5
Rhsim01G0000700 Rhododendron simsii HOM05D006046 ORTHO05D007580 1.4e-27 126.3 101 58.4
CsaV3_5G018640 Cucumis sativus L. HOM05D006046 ORTHO05D007580 1.8e-27 125.9 93 63.4
ECA247G1361 Erigeron canadensis HOM05D006046 ORTHO05D007580 1.8e-27 125.9 100 58.0
Sabra02G0148100 Salix brachista HOM05D006046 ORTHO05D007580 1.8e-27 125.9 92 62.0
TAR362G0326 Trochodendron aralioides HOM05D006046 ORTHO05D007580 1.8e-27 125.9 104 54.8
AUR62042114 Chenopodium quinoa HOM05D006046 ORTHO05D007580 2.3e-27 125.6 94 64.9
CSS0022330 Camellia sinensis var. sinensis HOM05D006046 ORTHO05D007580 3.0e-27 125.2 98 58.2
SGA_v2.0_scaffold572G52966 Striga asiatica HOM05D006046 ORTHO05D007580 3.0e-27 125.2 96 60.4
ClCG01G007200 Citrullus lanatus HOM05D006046 ORTHO05D007580 4.0e-27 124.8 93 62.4
DCAR_002940 Daucus carota HOM05D006046 ORTHO05D007580 4.0e-27 124.8 94 59.6
Sed0002893 Sechium edule HOM05D006046 ORTHO05D007580 5.2e-27 124.4 95 61.1
HanXRQChr10g0286481 Helianthus annuus HOM05D006046 ORTHO05D007580 6.7e-27 124.0 100 57.0
MD09G1291200 Malus domestica HOM05D006046 ORTHO05D007580 6.7e-27 124.0 98 57.1
Nn4g25300 Nelumbo nucifera HOM05D006046 ORTHO05D007580 6.7e-27 124.0 98 59.2
Peaxi162Scf00309g00623 Petunia axillaris HOM05D006046 ORTHO05D007580 6.7e-27 124.0 93 60.2
Aa31LG5G1400 Aethionema arabicum HOM05D006046 ORTHO05D007580 8.8e-27 123.6 98 56.1
CANSAT25G3010 Cannabis sativa HOM05D006046 ORTHO05D007580 8.8e-27 123.6 101 56.4
CARHR249980 Cardamine hirsuta HOM05D006046 ORTHO05D007580 8.8e-27 123.6 98 57.1
Nitab4.5_0003092g0030 Nicotiana tabacum HOM05D006046 ORTHO05D007580 8.8e-27 123.6 98 57.1
TWI23G1081 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 8.8e-27 123.6 93 59.1
AT4G01690 Arabidopsis thaliana HOM05D006046 ORTHO05D007580 1.5e-26 122.9 98 55.1
Carub.0006s3551 Capsella rubella HOM05D006046 ORTHO05D007580 1.5e-26 122.9 98 55.1
AL6G51640 Arabidopsis lyrata HOM05D006046 ORTHO05D007580 2.0e-26 122.5 98 55.1
Cc01_g21760 Coffea canephora HOM05D006046 ORTHO05D007580 2.0e-26 122.5 92 62.0
Glyma.02G007232 Glycine max HOM05D006046 ORTHO05D007580 2.0e-26 122.5 81 71.6
vmacro02355 Vaccinium macrocarpon HOM05D006046 ORTHO05D007580 2.6e-26 122.1 98 58.2
Solyc01g079090.4 Solanum lycopersicum HOM05D006046 ORTHO05D007580 3.3e-26 121.7 98 56.1
Sopen01g030600 Solanum pennellii HOM05D006046 ORTHO05D007580 3.3e-26 121.7 98 56.1
MSTRG.18059 Avicennia marina HOM05D006046 ORTHO05D007580 4.4e-26 121.3 96 57.3
Zm00001eb332380 Zea mays HOM05D006046 ORTHO05D007580 4.4e-26 121.3 95 57.9
Ah.12g061390 Amaranthus hybridus HOM05D006046 ORTHO05D007580 5.7e-26 120.9 96 59.4
Os01g0286600 Oryza sativa ssp. japonica HOM05D006046 ORTHO05D007580 5.7e-26 120.9 95 57.9
EL10Ac2g02399 Beta vulgaris HOM05D006046 ORTHO05D007580 9.7e-26 120.2 94 61.7
PGSC0003DMG400001117 Solanum tuberosum HOM05D006046 ORTHO05D007580 9.7e-26 120.2 98 55.1
Aqoxy5G02854 Aquilegia oxysepala HOM05D006046 ORTHO05D007580 1.7e-25 119.4 94 56.4
Sp6g01580 Schrenkiella parvula HOM05D006046 ORTHO05D007580 1.7e-25 119.4 98 54.1
Lsat_1_v5_gn_9_7041 Lactuca sativa HOM05D006046 ORTHO05D007580 2.2e-25 119.0 100 54.0
Prupe.3G001700 Prunus persica HOM05D006046 ORTHO05D007580 3.7e-25 118.2 98 56.1
RcHm_v2.0_Chr3g0485661 Rosa chinensis HOM05D006046 ORTHO05D007580 3.7e-25 118.2 98 55.1
Thhalv10028544m.g Eutrema salsugineum HOM05D006046 ORTHO05D007580 4.8e-25 117.9 98 53.1
HPP92_010589 Vanilla planifolia HOM05D006046 ORTHO05D007580 4.8e-25 117.9 95 58.9
FAN26G1773 Fragaria x ananassa HOM05D006046 ORTHO05D007580 8.2e-25 117.1 93 55.9
FAN28G0956 Fragaria x ananassa HOM05D006046 ORTHO05D007580 8.2e-25 117.1 93 55.9
FAN23G1049 Fragaria x ananassa HOM05D006046 ORTHO05D007580 1.8e-24 115.9 93 54.8
Migut.D00009 Erythranthe guttata HOM05D006046 ORTHO05D007580 2.4e-24 115.5 96 54.2
FvH4_1g26170 Fragaria vesca HOM05D006046 ORTHO05D007580 3.1e-24 115.2 93 54.8
FAN19G1511 Fragaria x ananassa HOM05D006046 ORTHO05D007580 3.1e-24 115.2 93 54.8
PSO761G0347 Papaver somniferum HOM05D006046 ORTHO05D007580 9.1e-24 113.6 93 55.9
PSO210G0070 Papaver somniferum HOM05D006046 ORTHO05D007580 1.2e-23 113.2 93 55.9
SEGI_28664 Sequoiadendron giganteum HOM05D006046 ORTHO05D007580 8.5e-22 107.1 91 52.7
SMO356G0553 Selaginella moellendorffii HOM05D006046 ORTHO05D007580 5.5e-21 104.4 91 51.6
AagrBONN_evm.TU.Sc2ySwM_368.2775 Anthoceros agrestis HOM05D006046 ORTHO05D007580 1.8e-19 99.4 92 47.8
Pp3c1_34400 Physcomitrium patens HOM05D006046 ORTHO05D007580 2.3e-19 99.0 94 48.9
CBR_g88559 Chara braunii HOM05D000019 ORTHO05D000353 8.8e-19 97.1 94 45.7
Mapoly0001s0469 Marchantia polymorpha HOM05D006046 ORTHO05D007580 3.7e-17 91.7 91 46.2
Cre09.g396300 Chlamydomonas reinhardtii HOM05D006046 ORTHO05D007580 8.3e-17 90.5 93 45.2
ECA247G1196 Erigeron canadensis HOM05D006046 ORTHO05D007580 1.3e-14 83.2 86 51.2
MCO14G379 Micromonas commoda HOM05D006046 ORTHO05D007580 1.7e-14 82.8 96 43.8
PRCOL_00002487 Prasinoderma coloniale HOM05D006046 ORTHO05D007580 9.5e-13 77.0 89 46.1
Sabra14G0082000 Salix brachista HOM05D006046 ORTHO05D007580 4.4e-10 68.2 56 51.8


User provided reference genes

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