Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R23H3E Arachis hypogaea HOM05D000263 ORTHO05D017450 2.4e-93 345.5 174 100.0
arahy.Tifrunner.gnm1.ann1.I6RG45 Arachis hypogaea HOM05D000263 ORTHO05D017450 1.6e-78 296.2 234 70.1
arahy.Tifrunner.gnm1.ann1.P9JGHW Arachis hypogaea HOM05D000263 ORTHO05D017450 1.1e-61 240.4 221 63.8
arahy.Tifrunner.gnm1.ann1.7G7S7J Arachis hypogaea HOM05D001900 ORTHO05D003003 1.9e-42 176.4 87 100.0
arahy.Tifrunner.gnm1.ann1.NMV4N9 Arachis hypogaea HOM05D000263 ORTHO05D017450 1.9e-42 176.4 209 52.2
arahy.Tifrunner.gnm1.ann1.MZSV4J Arachis hypogaea HOM05D018999 ORTHO05D017450 3.0e-16 89.4 42 100.0
arahy.Tifrunner.gnm1.ann1.HQG6CK Arachis hypogaea HOM05D002100 ORTHO05D001366 5.4e-13 78.6 65 72.3
arahy.Tifrunner.gnm1.ann1.MY6KA7 Arachis hypogaea HOM05D000370 ORTHO05D001366 5.4e-13 78.6 51 84.3
arahy.Tifrunner.gnm1.ann1.HUS56C Arachis hypogaea HOM05D000370 ORTHO05D001366 3.5e-12 75.9 51 82.4
arahy.Tifrunner.gnm1.ann1.46W7S4 Arachis hypogaea HOM05D002100 ORTHO05D002310 1.7e-11 73.6 65 69.2
arahy.Tifrunner.gnm1.ann1.DTCT6H Arachis hypogaea HOM05D000140 ORTHO05D017450 1.9e-10 70.1 32 90.6
Lalb_Chr16g0388341 Lupinus albus HOM05D000370 ORTHO05D001366 5.6e-10 68.6 54 72.2
Phvul.003G245700 Phaseolus vulgaris HOM05D000370 ORTHO05D001366 9.5e-10 67.8 51 72.5
VMungo0251G3238 Vigna mungo HOM05D000370 ORTHO05D001366 1.2e-09 67.4 51 70.6
Glyma.05G090400 Glycine max HOM05D000370 ORTHO05D001366 6.2e-09 65.1 39 84.6
Glyma.17G176400 Glycine max HOM05D000370 ORTHO05D001366 6.2e-09 65.1 39 84.6
Phvul.002G020400 Phaseolus vulgaris HOM05D000370 ORTHO05D001366 6.2e-09 65.1 55 69.1
Glyma.01G184600 Glycine max HOM05D000370 ORTHO05D001366 1.1e-08 64.3 51 74.5
Lj2g0004646 Lotus japonicus HOM05D000370 ORTHO05D001366 1.1e-08 64.3 46 71.7
Ca_22187_v3 Cicer arietinum L. HOM05D000370 ORTHO05D001366 2.3e-08 63.2 52 76.9
Manes.12G101500 Manihot esculenta HOM05D000370 ORTHO05D001366 4.0e-08 62.4 54 66.7
TPR.G19022 Trifolium pratense HOM05D000370 ORTHO05D001366 4.0e-08 62.4 51 70.6
Cpa.g.sc55.184 Carica papaya HOM05D000370 ORTHO05D001366 5.2e-08 62.0 55 67.3
QL06p042271 Quercus lobata HOM05D000370 ORTHO05D001366 5.2e-08 62.0 54 66.7
TAR023G0001 Trochodendron aralioides HOM05D000370 ORTHO05D001366 1.2e-07 60.8 54 64.8
TAR381G1636 Trochodendron aralioides HOM05D000370 ORTHO05D001366 1.2e-07 60.8 54 64.8
Psat4g087760 Pisum sativum HOM05D000370 ORTHO05D001366 1.5e-07 60.5 51 68.6
Atru.chr3.397 Acer truncatum HOM05D000370 ORTHO05D001366 2.0e-07 60.1 54 63.0
arahy.Tifrunner.gnm1.ann1.6RH3SX Arachis hypogaea HOM05D000370 ORTHO05D001366 2.6e-07 59.7 49 67.3
arahy.Tifrunner.gnm1.ann1.P7L3Q8 Arachis hypogaea HOM05D000370 ORTHO05D001366 2.6e-07 59.7 49 67.3
CiPaw.01G021500 Carya illinoinensis HOM05D000370 ORTHO05D001366 2.6e-07 59.7 54 63.0
Haze_15427 Corylus avellana HOM05D000370 ORTHO05D001366 3.4e-07 59.3 54 63.0
Glyma.11G057600 Glycine max HOM05D000370 ORTHO05D001366 3.4e-07 59.3 51 70.6
Gorai.007G211100 Gossypium raimondii HOM05D000370 ORTHO05D001366 3.4e-07 59.3 53 64.2
Lj4g0006337 Lotus japonicus HOM05D000370 ORTHO05D001366 3.4e-07 59.3 51 66.7
MD15G1281000 Malus domestica HOM05D000370 ORTHO05D001366 3.4e-07 59.3 54 61.1
Thecc.01G052500 Theobroma cacao HOM05D000370 ORTHO05D001366 3.4e-07 59.3 41 75.6
VMungo1215G1420 Vigna mungo HOM05D000370 ORTHO05D001366 5.8e-07 58.5 55 63.6
Duzib147G0580 Durio zibethinus HOM05D000370 ORTHO05D001366 7.5e-07 58.2 53 64.2
Ciclev10025216m.g Citrus clementina HOM05D000370 ORTHO05D001366 1.3e-06 57.4 51 64.7
FvH4_1g15700 Fragaria vesca HOM05D000370 ORTHO05D001366 1.3e-06 57.4 51 58.8
FAN19G1739 Fragaria x ananassa HOM05D000370 ORTHO05D001366 1.3e-06 57.4 51 58.8
FAN23G1486 Fragaria x ananassa HOM05D000370 ORTHO05D001366 1.3e-06 57.4 51 58.8
FAN26G1016 Fragaria x ananassa HOM05D000370 ORTHO05D001366 1.3e-06 57.4 51 58.8
FAN28G2765 Fragaria x ananassa HOM05D000370 ORTHO05D001366 1.3e-06 57.4 51 58.8
CSS0011035 Camellia sinensis var. sinensis HOM05D000370 ORTHO05D001366 1.7e-06 57.0 54 61.1
CSS0026554 Camellia sinensis var. sinensis HOM05D000370 ORTHO05D001366 1.7e-06 57.0 54 61.1
Nn5g30195 Nelumbo nucifera HOM05D000370 ORTHO05D001366 1.7e-06 57.0 54 61.1
GSVIVG01002634001 Vitis vinifera HOM05D000370 ORTHO05D001366 1.7e-06 57.0 54 61.1
Ca_24782_v3 Cicer arietinum L. HOM05D000370 ORTHO05D001366 2.2e-06 56.6 47 66.0
Gohir.A11G190400 Gossypium hirsutum HOM05D000370 ORTHO05D001366 2.2e-06 56.6 45 71.1
MD02G1169000 Malus domestica HOM05D000370 ORTHO05D001366 2.2e-06 56.6 54 59.3
Medtr5g017790 Medicago truncatula HOM05D000370 ORTHO05D001366 2.2e-06 56.6 47 66.0
TWI09G1255 Tripterygium wilfordii HOM05D000370 ORTHO05D001366 2.2e-06 56.6 54 63.0
CANSAT01G1263 Cannabis sativa HOM05D000370 ORTHO05D001366 2.9e-06 56.2 38 73.7
ClCG01G016700 Citrullus lanatus HOM05D000370 ORTHO05D001366 2.9e-06 56.2 56 58.9
MELO3C007549.2 Cucumis melo HOM05D000370 ORTHO05D001366 2.9e-06 56.2 56 58.9
Gohir.D11G197200 Gossypium hirsutum HOM05D000370 ORTHO05D001366 2.9e-06 56.2 53 62.3
Medtr8g079840 Medicago truncatula HOM05D000370 ORTHO05D001366 2.9e-06 56.2 51 64.7
Hma1.2p1_1744F.1_g300210 Hydrangea macrophylla HOM05D000370 ORTHO05D001366 3.7e-06 55.8 55 56.4
RcHm_v2.0_Chr2g0105011 Rosa chinensis HOM05D000370 ORTHO05D001366 3.7e-06 55.8 51 56.9
TAR628G1525 Trochodendron aralioides HOM05D000370 ORTHO05D001366 3.7e-06 55.8 54 59.3
COL.COLO4_11382 Corchorus olitorius HOM05D000370 ORTHO05D001366 4.9e-06 55.5 38 73.7
Eucgr.H01998 Eucalyptus grandis HOM05D000370 ORTHO05D001366 4.9e-06 55.5 54 57.4
Potri.007G041100 Populus trichocarpa HOM05D000370 ORTHO05D001366 4.9e-06 55.5 50 60.0
Prupe.7G136300 Prunus persica HOM05D000370 ORTHO05D001366 4.9e-06 55.5 54 55.6
CsaV3_6G043120 Cucumis sativus L. HOM05D000370 ORTHO05D001366 6.4e-06 55.1 56 57.1
Sabra07G0036800 Salix brachista HOM05D000370 ORTHO05D001366 6.4e-06 55.1 38 68.4
Cpa.g.sc376.8 Carica papaya HOM05D000370 ORTHO05D001366 8.3e-06 54.7 38 71.1
THA.LOC104819833 Tarenaya hassleriana HOM05D000370 ORTHO05D001366 8.3e-06 54.7 38 71.1
TPR.G31098 Trifolium pratense HOM05D000370 ORTHO05D001366 8.3e-06 54.7 48 64.6


User provided reference genes

Program Settings