Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R0159Z Arachis hypogaea HOM05D000034 ORTHO05D000037 7.4e-89 330.5 164 100.0
arahy.Tifrunner.gnm1.ann1.7VN967 Arachis hypogaea HOM05D000034 ORTHO05D002688 3.1e-79 298.5 153 96.7
arahy.Tifrunner.gnm1.ann1.32B3R7 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.0e-69 266.9 153 87.6
arahy.Tifrunner.gnm1.ann1.BVAS0V Arachis hypogaea HOM05D000034 ORTHO05D002688 1.0e-66 256.9 153 85.0
arahy.Tifrunner.gnm1.ann1.HQ0KDL Arachis hypogaea HOM05D000034 ORTHO05D000037 4.0e-66 255.0 153 83.0
arahy.Tifrunner.gnm1.ann1.YZ0U6R Arachis hypogaea HOM05D000034 ORTHO05D000037 5.7e-65 251.1 153 84.3
arahy.Tifrunner.gnm1.ann1.H0SGIW Arachis hypogaea HOM05D000034 ORTHO05D000037 9.7e-65 250.4 153 81.7
arahy.Tifrunner.gnm1.ann1.UA7YVD Arachis hypogaea HOM05D000034 ORTHO05D002688 9.7e-65 250.4 150 85.3
arahy.Tifrunner.gnm1.ann1.ZI7G4V Arachis hypogaea HOM05D000034 ORTHO05D000037 9.7e-65 250.4 153 81.0
arahy.Tifrunner.gnm1.ann1.WE81KZ Arachis hypogaea HOM05D000034 ORTHO05D000037 2.8e-64 248.8 153 81.7
arahy.Tifrunner.gnm1.ann1.X83YJQ Arachis hypogaea HOM05D000034 ORTHO05D000037 5.3e-63 244.6 153 81.7
arahy.Tifrunner.gnm1.ann1.MA56BK Arachis hypogaea HOM05D000034 ORTHO05D000037 7.0e-63 244.2 153 82.4
arahy.Tifrunner.gnm1.ann1.9D8PQC Arachis hypogaea HOM05D000034 ORTHO05D000037 9.1e-63 243.8 153 79.7
arahy.Tifrunner.gnm1.ann1.DEZ4SS Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-61 239.6 153 77.8
arahy.Tifrunner.gnm1.ann1.EQ53E4 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.7e-59 232.3 153 79.7
arahy.Tifrunner.gnm1.ann1.MJ9A6B Arachis hypogaea HOM05D000034 ORTHO05D000037 4.7e-59 231.5 153 79.7
arahy.Tifrunner.gnm1.ann1.VKP6N1 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-56 223.4 154 75.3
arahy.Tifrunner.gnm1.ann1.HK1YN3 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-56 223.0 153 74.5
arahy.Tifrunner.gnm1.ann1.ZJU5NW Arachis hypogaea HOM05D000034 ORTHO05D000037 1.6e-54 216.5 153 75.2
arahy.Tifrunner.gnm1.ann1.DP9QVX Arachis hypogaea HOM05D000034 ORTHO05D000037 4.5e-54 214.9 148 73.0
arahy.Tifrunner.gnm1.ann1.M13MKG Arachis hypogaea HOM05D000034 ORTHO05D000037 2.1e-51 206.1 154 68.2
arahy.Tifrunner.gnm1.ann1.PU0T7Q Arachis hypogaea HOM05D000034 ORTHO05D000037 5.2e-50 201.4 153 70.6
arahy.Tifrunner.gnm1.ann1.6NY9B7 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.4e-49 198.4 153 69.9
arahy.Tifrunner.gnm1.ann1.UG3HKF Arachis hypogaea HOM05D000034 ORTHO05D085197 4.3e-36 155.2 104 73.1
arahy.Tifrunner.gnm1.ann1.R5TWUS Arachis hypogaea HOM05D000034 ORTHO05D002688 4.7e-35 151.8 138 60.1
Lj3g0004214 Lotus japonicus HOM05D000034 ORTHO05D000037 6.8e-34 147.9 153 52.9
arahy.Tifrunner.gnm1.ann1.HC597B Arachis hypogaea HOM05D000034 ORTHO05D000037 7.5e-33 144.4 153 54.2
arahy.Tifrunner.gnm1.ann1.YALS00 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.1e-27 126.3 103 67.0
arahy.Tifrunner.gnm1.ann1.K9VYIK Arachis hypogaea HOM05D000034 ORTHO05D000037 3.6e-27 125.6 76 84.2
arahy.Tifrunner.gnm1.ann1.TX1YFJ Arachis hypogaea HOM05D000034 ORTHO05D000037 2.3e-26 122.9 119 58.0
arahy.Tifrunner.gnm1.ann1.1F06Y7 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.1e-26 122.5 75 82.7
TPR.G30347 Trifolium pratense HOM05D000034 ORTHO05D000037 4.0e-26 122.1 116 51.7
arahy.Tifrunner.gnm1.ann1.C53UV6 Arachis hypogaea HOM05D000034 ORTHO05D002688 2.2e-24 116.3 72 76.4
arahy.Tifrunner.gnm1.ann1.RN7F5A Arachis hypogaea HOM05D000034 ORTHO05D002688 3.7e-24 115.5 57 96.5
arahy.Tifrunner.gnm1.ann1.FM8Y5N Arachis hypogaea HOM05D000034 ORTHO05D084780 8.3e-24 114.4 105 61.0
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 1.9e-23 113.2 152 44.7
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 1.9e-23 113.2 152 44.1
arahy.Tifrunner.gnm1.ann1.I9R3F7 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.2e-23 112.5 128 46.9
TPR.G4321 Trifolium pratense HOM05D000034 ORTHO05D000037 9.2e-23 110.9 152 44.1
arahy.Tifrunner.gnm1.ann1.6V5U67 Arachis hypogaea HOM05D000034 ORTHO05D002688 1.2e-22 110.5 153 43.8
arahy.Tifrunner.gnm1.ann1.JTB2X3 Arachis hypogaea HOM05D000034 ORTHO05D002688 1.3e-21 107.1 59 89.8
arahy.Tifrunner.gnm1.ann1.WTS21Z Arachis hypogaea HOM05D000034 ORTHO05D002688 1.3e-21 107.1 59 89.8
arahy.Tifrunner.gnm1.ann1.4TMC55 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-21 106.7 113 46.0
arahy.Tifrunner.gnm1.ann1.AF0AHW Arachis hypogaea HOM05D000034 ORTHO05D000037 3.0e-21 105.9 130 45.4
arahy.Tifrunner.gnm1.ann1.0CN3DG Arachis hypogaea HOM05D000034 ORTHO05D000037 6.6e-21 104.8 113 46.0
arahy.Tifrunner.gnm1.ann1.2LJR5V Arachis hypogaea HOM05D000034 ORTHO05D000037 6.6e-21 104.8 113 46.0
arahy.Tifrunner.gnm1.ann1.J7EXNL Arachis hypogaea HOM05D000034 ORTHO05D000037 6.6e-21 104.8 113 46.0
arahy.Tifrunner.gnm1.ann1.S3G2CD Arachis hypogaea HOM05D000034 ORTHO05D000037 2.5e-20 102.8 113 46.0
arahy.Tifrunner.gnm1.ann1.G0F5LE Arachis hypogaea HOM05D000034 ORTHO05D000037 5.6e-20 101.7 66 80.3
Medtr7g056633 Medicago truncatula HOM05D000034 ORTHO05D000037 9.5e-20 100.9 80 65.0
arahy.Tifrunner.gnm1.ann1.R87UEX Arachis hypogaea HOM05D000034 ORTHO05D000037 1.6e-19 100.1 113 45.1
arahy.Tifrunner.gnm1.ann1.S3JL1H Arachis hypogaea HOM05D000034 ORTHO05D000037 2.8e-19 99.4 57 84.2
arahy.Tifrunner.gnm1.ann1.4S4BCN Arachis hypogaea HOM05D000034 ORTHO05D000037 1.1e-18 97.4 113 44.2
arahy.Tifrunner.gnm1.ann1.47S9UH Arachis hypogaea HOM05D000034 ORTHO05D000037 2.4e-18 96.3 54 87.0
arahy.Tifrunner.gnm1.ann1.QJ6RH7 Arachis hypogaea HOM05D000034 ORTHO05D000037 8.9e-18 94.4 113 42.5
Atru.chr1.2747 Acer truncatum HOM05D000034 ORTHO05D000037 2.0e-17 93.2 105 44.8
arahy.Tifrunner.gnm1.ann1.G9YS9Y Arachis hypogaea HOM05D000034 ORTHO05D000037 4.4e-17 92.0 92 50.0
arahy.Tifrunner.gnm1.ann1.KHJB0S Arachis hypogaea HOM05D000034 ORTHO05D000037 7.6e-17 91.3 92 50.0
arahy.Tifrunner.gnm1.ann1.UF8MH7 Arachis hypogaea HOM05D000034 ORTHO05D000037 7.6e-17 91.3 57 77.2
arahy.Tifrunner.gnm1.ann1.QPXK76 Arachis hypogaea HOM05D000034 ORTHO05D000037 9.9e-17 90.9 51 86.3
arahy.Tifrunner.gnm1.ann1.8F2PVX Arachis hypogaea HOM05D000034 ORTHO05D000037 4.9e-16 88.6 42 97.6
arahy.Tifrunner.gnm1.ann1.ZAI0PN Arachis hypogaea HOM05D000034 ORTHO05D000037 8.4e-16 87.8 92 47.8
Phvul.006G011400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.4e-15 86.3 80 53.8
VMungo1309G1908 Vigna mungo HOM05D000034 ORTHO05D000037 9.2e-15 84.3 113 39.8
arahy.Tifrunner.gnm1.ann1.RLL47Z Arachis hypogaea HOM05D000034 ORTHO05D000037 1.2e-14 84.0 45 86.7
arahy.Tifrunner.gnm1.ann1.JTWU2D Arachis hypogaea HOM05D000034 ORTHO05D000037 1.6e-14 83.6 42 92.9
arahy.Tifrunner.gnm1.ann1.5K8YRR Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-13 80.5 86 50.0
Phvul.007G097400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.7e-13 80.1 79 50.6
arahy.Tifrunner.gnm1.ann1.NVRL0R Arachis hypogaea HOM05D000034 ORTHO05D002688 5.1e-13 78.6 153 37.3
arahy.Tifrunner.gnm1.ann1.Y1ZLZJ Arachis hypogaea HOM05D000034 ORTHO05D000037 5.1e-13 78.6 42 85.7
arahy.Tifrunner.gnm1.ann1.RY8G8Q Arachis hypogaea HOM05D000034 ORTHO05D000037 6.6e-13 78.2 42 88.1
arahy.Tifrunner.gnm1.ann1.LYDW2M Arachis hypogaea HOM05D000034 ORTHO05D002688 8.7e-13 77.8 57 71.9
Psat0s1646g0360 Pisum sativum HOM05D000034 ORTHO05D000037 8.7e-13 77.8 92 42.4
arahy.Tifrunner.gnm1.ann1.1KRF1J Arachis hypogaea HOM05D000034 ORTHO05D000037 1.1e-12 77.4 130 37.7
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.9e-12 76.6 155 33.5
arahy.Tifrunner.gnm1.ann1.IJ8REE Arachis hypogaea HOM05D000034 ORTHO05D000037 2.5e-12 76.3 42 85.7
arahy.Tifrunner.gnm1.ann1.3DP457 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.3e-12 75.5 41 82.9
arahy.Tifrunner.gnm1.ann1.F29N5R Arachis hypogaea HOM05D000034 ORTHO05D000037 1.2e-11 73.9 130 36.9
Atru.chr5.1595 Acer truncatum HOM05D000034 ORTHO05D000037 1.6e-11 73.6 61 54.1
arahy.Tifrunner.gnm1.ann1.V5K3GS Arachis hypogaea HOM05D000034 ORTHO05D000037 1.6e-11 73.6 42 83.3
Medtr8g463880 Medicago truncatula HOM05D000034 ORTHO05D000037 2.1e-11 73.2 105 40.0
arahy.Tifrunner.gnm1.ann1.WF73TH Arachis hypogaea HOM05D000034 ORTHO05D087225 2.8e-11 72.8 150 37.3
TPR.G21816 Trifolium pratense HOM05D000034 ORTHO05D000037 3.6e-11 72.4 61 52.5
arahy.Tifrunner.gnm1.ann1.JI4RF0 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.2e-11 71.6 51 74.5
arahy.Tifrunner.gnm1.ann1.QFE2NK Arachis hypogaea HOM05D000034 ORTHO05D000037 8.1e-11 71.2 42 81.0
Hma1.2p1_1028F.1_g249540 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-10 70.9 127 36.2
Hma1.2p1_1028F.1_g249543 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-10 70.9 127 36.2
TPR.G34592 Trifolium pratense HOM05D000034 ORTHO05D000037 1.8e-10 70.1 57 54.4
arahy.Tifrunner.gnm1.ann1.0QS890 Arachis hypogaea HOM05D000034 ORTHO05D086315 6.9e-10 68.2 46 69.6
Hma1.2p1_0672F.1_g201050 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.0e-10 67.8 109 36.7
Hma1.2p1_0315F.1_g122270 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-09 66.6 65 49.2
Hma1.2p1_0301F.1_g118210 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.6e-09 66.2 68 50.0
Hma1.2p1_0308F.1_g120260 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.6e-09 66.2 108 34.3
Ah.10g026390 Amaranthus hybridus HOM05D000034 ORTHO05D000037 3.4e-09 65.9 109 36.7
Hma1.2p1_0091F.1_g046180 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.4e-09 65.9 109 35.8
arahy.Tifrunner.gnm1.ann1.Z066NA Arachis hypogaea HOM05D000034 ORTHO05D000037 7.6e-09 64.7 46 60.9
Hma1.2p1_3244F.1_g334330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.6e-09 64.7 109 35.8
EL10Ac8g20166 Beta vulgaris HOM05D000034 ORTHO05D000037 1.3e-08 63.9 107 33.6
arahy.Tifrunner.gnm1.ann1.GASR5E Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-08 63.5 42 69.0
arahy.Tifrunner.gnm1.ann1.RY2FI6 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-08 63.5 42 66.7
Sc05g0005320 Simmondsia chinensis HOM05D000034 ORTHO05D000037 1.7e-08 63.5 81 49.4
arahy.Tifrunner.gnm1.ann1.1E5NJ8 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.9e-08 62.8 42 66.7
arahy.Tifrunner.gnm1.ann1.KKV6L9 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.9e-08 62.8 32 93.8
AUR62044082 Chenopodium quinoa HOM05D000034 ORTHO05D030741 3.8e-08 62.4 87 43.7
arahy.Tifrunner.gnm1.ann1.GIX9KU Arachis hypogaea HOM05D000034 ORTHO05D000037 4.9e-08 62.0 42 64.3
AUR62040606 Chenopodium quinoa HOM05D000034 ORTHO05D000037 8.4e-08 61.2 83 44.6
Aqoxy6G02146 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 3.2e-07 59.3 107 32.7
EL10Ac5g12238 Beta vulgaris HOM05D000034 ORTHO05D000037 3.2e-07 59.3 69 44.9
Aqoxy1G02665 Aquilegia oxysepala HOM05D011109 ORTHO05D012445 4.2e-07 58.9 108 30.6
arahy.Tifrunner.gnm1.ann1.Z8MEFY Arachis hypogaea HOM05D000034 ORTHO05D000037 9.3e-07 57.8 37 73.0
Hma1.2p1_0018F.1_g013500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.3e-07 57.8 101 33.7
Rhsim04G0111600 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.2e-06 57.4 51 51.0
RhsimUnG0001400 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.2e-06 57.4 51 51.0
Aqoxy4G02479 Aquilegia oxysepala HOM05D011109 ORTHO05D012445 1.6e-06 57.0 108 30.6
Aqoxy5G01122 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.6e-06 57.0 62 43.5
Lj3g0023510 Lotus japonicus HOM05D000034 ORTHO05D000037 1.6e-06 57.0 39 69.2
EL10Ac2g03305 Beta vulgaris HOM05D000034 ORTHO05D000037 2.1e-06 56.6 51 52.9
Aqoxy5G02692 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.7e-06 56.2 107 32.7
MBI04_g40874_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.7e-06 56.2 141 28.4
TPR.G3961 Trifolium pratense HOM05D000034 ORTHO05D000037 2.7e-06 56.2 98 34.7
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 3.5e-06 55.8 41 58.5
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 3.5e-06 55.8 41 58.5
TPR.G19283 Trifolium pratense HOM05D001558 ORTHO05D000037 4.6e-06 55.5 82 36.6
Aqoxy4G01233 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.0e-06 55.1 50 48.0
Aqoxy2G01653 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 7.8e-06 54.7 58 44.8
HanXRQChr04g0123061 Helianthus annuus HOM05D000034 ORTHO05D000037 7.8e-06 54.7 107 31.8
TPR.G27983 Trifolium pratense HOM05D005504 ORTHO05D002688 7.8e-06 54.7 77 37.7


User provided reference genes

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