Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QXP99D Arachis hypogaea HOM05D000423 ORTHO05D000284 1.7e-70 269.2 135 100.0
VMungo0647G0807 Vigna mungo HOM05D000423 ORTHO05D000284 2.2e-30 136.0 146 56.8
Glyma.13G038300 Glycine max HOM05D000423 ORTHO05D000284 3.8e-30 135.2 151 55.0
Phvul.001G063900 Phaseolus vulgaris HOM05D000423 ORTHO05D000284 1.6e-28 129.8 146 55.5
Glyma.14G120900 Glycine max HOM05D000423 ORTHO05D000284 2.1e-28 129.4 151 55.0
Lj1g0027064 Lotus japonicus HOM05D000423 ORTHO05D000284 6.6e-27 124.4 140 55.0
Ca_12659_v3 Cicer arietinum L. HOM05D000423 ORTHO05D000284 2.6e-23 112.5 141 51.1
ClCG09G009730 Citrullus lanatus HOM05D000423 ORTHO05D000284 1.7e-22 109.8 106 59.4
Psat0s502g0040 Pisum sativum HOM05D000423 ORTHO05D000284 3.8e-22 108.6 143 51.0
Solyc06g059730.3 Solanum lycopersicum HOM05D000423 ORTHO05D000284 3.8e-22 108.6 115 55.7
Sopen06g019800 Solanum pennellii HOM05D000423 ORTHO05D000284 3.8e-22 108.6 115 55.7
GSVIVG01010025001 Vitis vinifera HOM05D000423 ORTHO05D000284 3.8e-22 108.6 144 50.7
Hma1.2p1_0107F.1_g051420 Hydrangea macrophylla HOM05D000423 ORTHO05D000284 6.4e-22 107.8 154 47.4
TAR376G0915 Trochodendron aralioides HOM05D000423 ORTHO05D000284 6.4e-22 107.8 163 44.8
Medtr1g029190 Medicago truncatula HOM05D000423 ORTHO05D000284 1.1e-21 107.1 139 49.6
Dinv25807 Davidia involucrata HOM05D000423 ORTHO05D000284 2.4e-21 105.9 160 46.2
Potri.005G187500 Populus trichocarpa HOM05D000423 ORTHO05D000284 2.4e-21 105.9 132 50.8
Eucgr.F04265 Eucalyptus grandis HOM05D000423 ORTHO05D000284 5.4e-21 104.8 123 53.7
Nn1g06212 Nelumbo nucifera HOM05D000423 ORTHO05D000284 7.1e-21 104.4 167 44.3
PGSC0003DMG400030755 Solanum tuberosum HOM05D000423 ORTHO05D000284 7.1e-21 104.4 118 52.5
Prupe.8G018200 Prunus persica HOM05D000423 ORTHO05D000284 9.3e-21 104.0 119 52.9
CSS0037854 Camellia sinensis var. sinensis HOM05D000423 ORTHO05D000284 1.2e-20 103.6 112 54.5
MD10G1014300 Malus domestica HOM05D000423 ORTHO05D000284 1.2e-20 103.6 128 48.4
Atru.chr13.1706 Acer truncatum HOM05D000423 ORTHO05D000284 2.1e-20 102.8 162 44.4
Nitab4.5_0001821g0040 Nicotiana tabacum HOM05D000423 ORTHO05D000284 2.7e-20 102.4 160 45.0
Oeu046002.2 Olea europaea HOM05D000423 ORTHO05D000284 2.7e-20 102.4 115 56.5
Cc10_g12950 Coffea canephora HOM05D000423 ORTHO05D000284 4.6e-20 101.7 124 53.2
PGR044G2399 Punica granatum HOM05D000423 ORTHO05D000284 4.6e-20 101.7 127 49.6
Gohir.D02G073100 Gossypium hirsutum HOM05D000423 ORTHO05D000284 7.9e-20 100.9 119 55.5
MBI03_g11306_MAGBIO Magnolia biondii HOM05D000423 ORTHO05D000284 1.3e-19 100.1 155 43.2
CiPaw.15G022000 Carya illinoinensis HOM05D000423 ORTHO05D000284 1.8e-19 99.8 121 52.1
Dinv41125 Davidia involucrata HOM05D000423 ORTHO05D000284 1.8e-19 99.8 156 44.9
AL2G37280 Arabidopsis lyrata HOM05D000423 ORTHO05D000284 2.3e-19 99.4 145 46.2
Gohir.A02G066900 Gossypium hirsutum HOM05D000423 ORTHO05D000284 2.3e-19 99.4 119 54.6
Gorai.005G082500 Gossypium raimondii HOM05D000423 ORTHO05D000284 2.3e-19 99.4 119 54.6
Sabra02G0056800 Salix brachista HOM05D000423 ORTHO05D000284 3.9e-19 98.6 133 48.1
Peaxi162Scf00033g00711 Petunia axillaris HOM05D000423 ORTHO05D000284 5.1e-19 98.2 147 46.3
Actinidia10675 Actinidia chinensis HOM05D000423 ORTHO05D000284 8.7e-19 97.4 109 54.1
Duzib093G1378 Durio zibethinus HOM05D000423 ORTHO05D000284 1.1e-18 97.1 122 52.5
Thecc.08G144000 Theobroma cacao HOM05D000423 ORTHO05D000284 1.5e-18 96.7 121 52.1
Ciclev10000794m.g Citrus clementina HOM05D000423 ORTHO05D000284 2.5e-18 95.9 118 50.0
COL.COLO4_08854 Corchorus olitorius HOM05D000423 ORTHO05D000284 5.6e-18 94.7 122 52.5
Cfa018369 Carpinus fangiana HOM05D000423 ORTHO05D000226 7.4e-18 94.4 159 44.7
CiPaw.16G018100 Carya illinoinensis HOM05D000423 ORTHO05D000284 7.4e-18 94.4 117 53.0
THA.LOC104812073 Tarenaya hassleriana HOM05D000423 ORTHO05D000284 7.4e-18 94.4 169 42.6
Manes.18G087300 Manihot esculenta HOM05D000423 ORTHO05D000284 9.6e-18 94.0 155 44.5
Sabra05G0143100 Salix brachista HOM05D000423 ORTHO05D000284 9.6e-18 94.0 132 45.5
Actinidia15161 Actinidia chinensis HOM05D000423 ORTHO05D000284 1.6e-17 93.2 108 54.6
MSTRG.24190 Avicennia marina HOM05D000423 ORTHO05D000284 3.6e-17 92.0 117 52.1
TPR.G33294 Trifolium pratense HOM05D000423 ORTHO05D000284 3.6e-17 92.0 100 57.0
CAN.G319.1 Capsicum annuum HOM05D000423 ORTHO05D000284 8.1e-17 90.9 106 53.8
AT1G77110 Arabidopsis thaliana HOM05D000423 ORTHO05D000284 1.1e-16 90.5 166 40.4
Haze_17700 Corylus avellana HOM05D000423 ORTHO05D000284 1.1e-16 90.5 161 44.7
BcaC08g47208 Brassica carinata HOM05D000423 ORTHO05D000284 1.8e-16 89.7 136 44.9
BcaNung04779 Brassica carinata HOM05D000423 ORTHO05D000284 1.8e-16 89.7 136 44.9
A07p42680 Brassica napus HOM05D000423 ORTHO05D000284 1.8e-16 89.7 136 44.9
C06p51270 Brassica napus HOM05D000423 ORTHO05D000284 1.8e-16 89.7 136 44.9
BolC6t40148H Brassica oleracea HOM05D000423 ORTHO05D000284 1.8e-16 89.7 136 44.9
BraA07t31790Z Brassica rapa HOM05D000423 ORTHO05D000284 1.8e-16 89.7 136 44.9
Carub.0002s2399 Capsella rubella HOM05D000423 ORTHO05D000284 1.8e-16 89.7 137 43.8
Sp5g32230 Schrenkiella parvula HOM05D000423 ORTHO05D000284 1.8e-16 89.7 135 45.9
CARHR070590 Cardamine hirsuta HOM05D000423 ORTHO05D000284 3.1e-16 89.0 164 42.1
Nitab4.5_0003482g0010 Nicotiana tabacum HOM05D000423 ORTHO05D000284 9.0e-16 87.4 128 47.7
Thhalv10018345m.g Eutrema salsugineum HOM05D000423 ORTHO05D000284 1.2e-15 87.0 135 45.2
Migut.C01042 Erythranthe guttata HOM05D000423 ORTHO05D000284 3.4e-15 85.5 126 49.2
Lj7A364T77 Lonicera japonica HOM05D000423 ORTHO05D000284 5.8e-15 84.7 102 53.9
QL02p025474 Quercus lobata HOM05D000423 ORTHO05D000284 1.0e-11 73.9 116 47.4
Aa31LG4G7140 Aethionema arabicum HOM05D000423 ORTHO05D000284 3.9e-11 72.0 128 42.2
Potri.002G072200 Populus trichocarpa HOM05D000423 ORTHO05D000284 5.1e-11 71.6 58 65.5
SalBow6G2455 Salvia bowleyana HOM05D000423 ORTHO05D000284 5.1e-11 71.6 83 55.4
SGA_v2.0_scaffold25G11156 Striga asiatica HOM05D000423 ORTHO05D000284 2.5e-10 69.3 106 45.3
BcaNung04780 Brassica carinata HOM05D000423 ORTHO05D000284 8.2e-09 64.3 67 55.2
Thhalv10009962m.g Eutrema salsugineum HOM05D000423 ORTHO05D000284 2.4e-08 62.8 71 53.5


User provided reference genes

Program Settings