Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 1.9e-30 135.2 67 100.0
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 8.7e-20 99.8 60 80.0
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 8.7e-20 99.8 60 80.0
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 2.5e-19 98.2 60 76.7
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 2.5e-19 98.2 60 78.3
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 4.3e-19 97.4 60 76.7
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 5.6e-19 97.1 60 78.3
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 5.6e-19 97.1 60 76.7
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 5.6e-19 97.1 60 76.7
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 5.6e-19 97.1 60 76.7
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 9.6e-19 96.3 60 76.7
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 9.6e-19 96.3 60 75.0
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 9.6e-19 96.3 60 75.0
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 9.6e-19 96.3 60 75.0
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 9.6e-19 96.3 60 75.0
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 9.6e-19 96.3 60 75.0
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 1.3e-18 95.9 60 76.7
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 1.6e-18 95.5 60 75.0
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 1.6e-18 95.5 60 75.0
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 2.1e-18 95.1 60 71.7
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 2.1e-18 95.1 60 76.7
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 2.8e-18 94.7 60 76.7
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 2.8e-18 94.7 60 73.3
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 2.8e-18 94.7 60 75.0
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 2.8e-18 94.7 60 73.3
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 2.8e-18 94.7 59 74.6
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 3.6e-18 94.4 51 86.3
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 3.6e-18 94.4 60 75.0
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 3.6e-18 94.4 60 75.0
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 3.6e-18 94.4 52 80.8
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 4.8e-18 94.0 59 74.6
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 6.2e-18 93.6 50 86.0
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 6.2e-18 93.6 59 74.6
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 6.2e-18 93.6 60 73.3
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 8.1e-18 93.2 60 71.7
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 8.1e-18 93.2 60 75.0
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 8.1e-18 93.2 50 86.0
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 8.1e-18 93.2 60 73.3
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 1.1e-17 92.8 60 70.0
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 1.1e-17 92.8 60 70.0
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 1.1e-17 92.8 52 82.7
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 1.1e-17 92.8 60 71.7
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 1.1e-17 92.8 60 71.7
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 1.1e-17 92.8 60 75.0
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 1.1e-17 92.8 60 71.7
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 1.4e-17 92.4 60 71.7
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 1.4e-17 92.4 59 72.9
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 1.8e-17 92.0 59 72.9
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 1.8e-17 92.0 52 80.8
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 1.8e-17 92.0 60 70.0
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 1.8e-17 92.0 60 71.7
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 1.8e-17 92.0 60 70.0
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 2.4e-17 91.7 52 80.8
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 2.4e-17 91.7 60 70.0
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.4e-17 91.7 60 70.0
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.4e-17 91.7 60 70.0
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.4e-17 91.7 60 70.0
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 2.4e-17 91.7 60 70.0
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 2.4e-17 91.7 60 70.0
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 2.4e-17 91.7 59 74.6
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 3.1e-17 91.3 52 80.8
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 3.1e-17 91.3 59 71.2
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 4.0e-17 90.9 59 71.2
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 4.0e-17 90.9 60 68.3
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 5.3e-17 90.5 59 71.2
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 5.3e-17 90.5 59 71.2
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 5.3e-17 90.5 60 73.3
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 5.3e-17 90.5 60 71.7
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 5.3e-17 90.5 59 74.6
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 9.0e-17 89.7 59 69.5
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 9.0e-17 89.7 60 70.0
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 9.0e-17 89.7 53 77.4
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 9.0e-17 89.7 50 84.0
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 9.0e-17 89.7 60 68.3
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 1.2e-16 89.4 52 76.9
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 1.2e-16 89.4 59 69.5
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 1.5e-16 89.0 52 76.9
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 1.5e-16 89.0 52 78.8
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 1.5e-16 89.0 60 65.0
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 2.6e-16 88.2 60 68.3
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 3.4e-16 87.8 59 67.8
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 3.4e-16 87.8 59 67.8
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 3.4e-16 87.8 59 67.8
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 4.5e-16 87.4 68 61.8
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 4.5e-16 87.4 50 80.0
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 4.5e-16 87.4 60 66.7
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 5.8e-16 87.0 51 76.5
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 5.8e-16 87.0 60 65.0
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 5.8e-16 87.0 60 65.0
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 1.3e-15 85.9 59 67.8
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 1.1e-14 82.8 50 80.0
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 3.2e-14 81.3 50 72.0
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 9.3e-14 79.7 49 75.5
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.2e-13 79.3 49 73.5
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 3.5e-13 77.8 49 73.5
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 8.2e-10 66.6 35 88.6
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 2.0e-08 62.0 40 75.0
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 1.7e-07 58.9 52 50.0
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 1.1e-06 56.2 51 45.1
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 1.4e-06 55.8 46 52.2
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 1.4e-06 55.8 52 46.2
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 1.9e-06 55.5 60 46.7


User provided reference genes

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