Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 6.9e-145 517.3 265 100.0
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 1.9e-139 499.2 265 97.0
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 7.5e-99 364.4 266 71.8
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 9.8e-99 364.0 265 72.1
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 1.3e-98 363.6 265 70.6
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 1.7e-95 353.2 265 70.2
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 6.6e-95 351.3 266 68.8
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 2.3e-92 342.8 266 66.9
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 5.2e-92 341.7 266 69.2
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 8.9e-92 340.9 261 70.9
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 1.6e-88 330.1 265 66.4
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 6.6e-87 324.7 261 65.9
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 6.8e-84 314.7 265 62.6
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 3.4e-83 312.4 265 61.1
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.7e-82 310.1 265 60.4
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 4.9e-82 308.5 265 60.0
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 6.4e-82 308.1 266 59.0
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 1.9e-81 306.6 265 61.1
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 4.1e-81 305.4 265 60.4
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 7.0e-81 304.7 265 60.4
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 1.6e-80 303.5 265 61.1
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 2.0e-80 303.1 270 60.4
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 2.7e-80 302.8 270 60.0
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 4.6e-80 302.0 265 58.9
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 4.6e-80 302.0 267 61.0
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 4.6e-80 302.0 267 61.0
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 6.0e-80 301.6 259 60.2
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 2.3e-79 299.7 265 58.1
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 3.9e-79 298.9 267 59.2
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 3.3e-78 295.8 265 58.1
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 5.6e-78 295.0 263 58.6
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 5.6e-78 295.0 267 58.1
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 9.5e-78 294.3 269 58.7
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 2.1e-77 293.1 267 58.4
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 3.6e-77 292.4 269 58.0
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 4.7e-77 292.0 267 60.3
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 6.2e-77 291.6 267 58.1
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 8.0e-77 291.2 285 55.1
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 1.1e-76 290.8 268 59.0
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 1.1e-76 290.8 269 57.6
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 1.4e-76 290.4 267 57.7
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 1.4e-76 290.4 269 58.0
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 1.8e-76 290.0 267 59.2
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 4.0e-76 288.9 266 57.5
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 4.0e-76 288.9 266 55.6
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 6.8e-76 288.1 267 58.8
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 8.9e-76 287.7 264 57.2
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 1.2e-75 287.3 266 56.0
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 3.4e-75 285.8 268 56.3
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 5.8e-75 285.0 270 55.6
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 7.5e-75 284.6 288 57.3
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 9.8e-75 284.3 262 58.0
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 1.3e-74 283.9 270 56.3
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 3.7e-74 282.3 268 57.5
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 4.9e-74 282.0 262 58.0
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 8.3e-74 281.2 267 57.3
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 8.3e-74 281.2 265 57.7
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 1.1e-73 280.8 269 55.8
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 1.4e-73 280.4 263 55.1
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 1.4e-73 280.4 268 54.5
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 1.4e-73 280.4 266 56.8
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 4.1e-73 278.9 270 55.2
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 5.4e-73 278.5 268 55.2
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 9.2e-73 277.7 268 57.5
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 1.2e-72 277.3 276 54.7
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 2.1e-72 276.6 263 54.8
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 2.1e-72 276.6 263 55.5
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 6.0e-72 275.0 261 54.4
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 6.0e-72 275.0 265 57.0
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 7.8e-72 274.6 265 55.5
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 2.3e-71 273.1 264 53.8
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 3.0e-71 272.7 263 54.4
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 6.6e-71 271.6 264 54.9
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 1.1e-70 270.8 270 55.9
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 1.5e-70 270.4 266 54.9
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 7.3e-70 268.1 208 62.0
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 1.6e-69 266.9 258 54.3
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 8.1e-69 264.6 265 54.0
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 1.4e-68 263.8 270 52.2
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 3.1e-68 262.7 288 50.7
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 5.2e-68 261.9 288 50.0
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 1.5e-67 260.4 271 52.4
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 2.0e-67 260.0 268 54.9
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 4.4e-67 258.8 268 52.2
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 2.9e-66 256.1 223 61.4
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 2.4e-65 253.1 268 52.2
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 2.3e-63 246.5 266 48.5
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 8.1e-61 238.0 315 43.8
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 4.4e-59 232.3 265 47.9
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 7.6e-59 231.5 261 49.8
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 9.2e-57 224.6 265 49.4
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 2.3e-55 219.9 262 45.0
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 2.3e-55 219.9 264 47.3
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 5.1e-55 218.8 266 48.5
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.9e-54 216.9 202 58.4
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 4.3e-46 189.1 159 58.5
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 2.1e-45 186.8 257 43.6
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 5.4e-41 172.2 169 58.6
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 1.6e-37 160.6 253 37.9
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 3.4e-35 152.9 204 44.1
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 1.0e-31 141.4 261 36.8
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 2.6e-27 126.7 274 33.2
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 3.8e-26 122.9 154 49.4
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 7.1e-25 118.6 136 52.9
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 2.0e-14 84.0 92 39.1
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 2.0e-14 84.0 63 57.1
SMO290G0011 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 1.4e-12 77.8 254 27.6
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 1.2e-11 74.7 226 27.9
BolC6t39233H Brassica oleracea HOM05D002897 ORTHO05D008718 2.5e-09 67.0 45 64.4
Aa31sc72G10 Aethionema arabicum HOM05D002897 ORTHO05D008718 5.5e-09 65.9 117 35.9


User provided reference genes

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