Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QQKJ1F Arachis hypogaea HOM05D020554 ORTHO05D019797 5.6e-83 310.8 152 100.0
arahy.Tifrunner.gnm1.ann1.0MT9NG Arachis hypogaea HOM05D019415 ORTHO05D019797 1.7e-26 123.2 66 89.4
arahy.Tifrunner.gnm1.ann1.H6XHDL Arachis hypogaea HOM05D020554 ORTHO05D019797 2.1e-21 106.3 144 51.4
arahy.Tifrunner.gnm1.ann1.R6N8IY Arachis hypogaea HOM05D020554 ORTHO05D082441 2.6e-19 99.4 89 64.0
arahy.Tifrunner.gnm1.ann1.BAS56G Arachis hypogaea HOM05D020554 ORTHO05D083546 7.5e-19 97.8 89 65.2
arahy.Tifrunner.gnm1.ann1.Q8WBJA Arachis hypogaea HOM05D020554 ORTHO05D085476 1.3e-18 97.1 86 65.1
arahy.Tifrunner.gnm1.ann1.7YF5UB Arachis hypogaea HOM05D020554 ORTHO05D086087 1.4e-12 77.0 80 57.5
arahy.Tifrunner.gnm1.ann1.7A9T8X Arachis hypogaea HOM05D000765 ORTHO05D000613 7.0e-09 64.7 42 61.9
arahy.Tifrunner.gnm1.ann1.DN7S30 Arachis hypogaea HOM05D000765 ORTHO05D000613 7.0e-09 64.7 42 61.9
arahy.Tifrunner.gnm1.ann1.G0ML1P Arachis hypogaea HOM05D000765 ORTHO05D000613 7.0e-09 64.7 42 61.9
Glyma.16G156800 Glycine max HOM05D000765 ORTHO05D000613 7.0e-09 64.7 42 61.9
VMungo0464G1021 Vigna mungo HOM05D000765 ORTHO05D000613 7.0e-09 64.7 42 61.9
VMungo0464G1051 Vigna mungo HOM05D000765 ORTHO05D000613 7.0e-09 64.7 42 61.9
Medtr4g131920 Medicago truncatula HOM05D000765 ORTHO05D000613 9.2e-09 64.3 43 58.1
Phvul.004G082200 Phaseolus vulgaris HOM05D000765 ORTHO05D000613 9.2e-09 64.3 42 59.5
Phvul.004G085100 Phaseolus vulgaris HOM05D000765 ORTHO05D000613 9.2e-09 64.3 42 59.5
Phvul.004G085400 Phaseolus vulgaris HOM05D000765 ORTHO05D000613 9.2e-09 64.3 42 59.5
Phvul.004G086064 Phaseolus vulgaris HOM05D000765 ORTHO05D000613 9.2e-09 64.3 42 59.5
arahy.Tifrunner.gnm1.ann1.63A9GQ Arachis hypogaea HOM05D000765 ORTHO05D000613 1.6e-08 63.5 43 60.5
arahy.Tifrunner.gnm1.ann1.7US8C9 Arachis hypogaea HOM05D000765 ORTHO05D000613 1.6e-08 63.5 42 61.9
arahy.Tifrunner.gnm1.ann1.P3BT67 Arachis hypogaea HOM05D000765 ORTHO05D000613 1.6e-08 63.5 43 60.5
Glyma.02G075000 Glycine max HOM05D000765 ORTHO05D000613 1.6e-08 63.5 42 59.5
Glyma.16G156900 Glycine max HOM05D000765 ORTHO05D000613 1.6e-08 63.5 42 59.5
Glyma.16G157000 Glycine max HOM05D000765 ORTHO05D000613 1.6e-08 63.5 42 59.5
Lalb_Chr19g0129821 Lupinus albus HOM05D000765 ORTHO05D000613 1.6e-08 63.5 43 60.5
Lj2g0016811 Lotus japonicus HOM05D000765 ORTHO05D000613 2.0e-08 63.2 42 59.5
Lalb_Chr03g0035831 Lupinus albus HOM05D000765 ORTHO05D000613 2.0e-08 63.2 43 60.5
Phvul.004G085500 Phaseolus vulgaris HOM05D000765 ORTHO05D000613 2.0e-08 63.2 42 61.9
Phvul.004G085594 Phaseolus vulgaris HOM05D000765 ORTHO05D000613 2.0e-08 63.2 42 61.9
arahy.Tifrunner.gnm1.ann1.0V8P4W Arachis hypogaea HOM05D000765 ORTHO05D000613 2.7e-08 62.8 43 58.1
arahy.Tifrunner.gnm1.ann1.I2L3QA Arachis hypogaea HOM05D000765 ORTHO05D000613 2.7e-08 62.8 43 58.1
Psat1g106800 Pisum sativum HOM05D000765 ORTHO05D000613 3.5e-08 62.4 43 55.8
Lalb_Chr06g0169111 Lupinus albus HOM05D000765 ORTHO05D000613 4.6e-08 62.0 43 60.5
Medtr6g043880 Medicago truncatula HOM05D000765 ORTHO05D000613 4.6e-08 62.0 43 55.8
Psat4g007200 Pisum sativum HOM05D000765 ORTHO05D000613 4.6e-08 62.0 43 55.8
VMungo0464G0661 Vigna mungo HOM05D000765 ORTHO05D000613 4.6e-08 62.0 42 61.9
Lalb_Chr02g0150161 Lupinus albus HOM05D000765 ORTHO05D000613 5.9e-08 61.6 43 58.1
Lalb_Chr02g0150191 Lupinus albus HOM05D000765 ORTHO05D000613 5.9e-08 61.6 43 58.1
arahy.Tifrunner.gnm1.ann1.1RV5TE Arachis hypogaea HOM05D000765 ORTHO05D000613 7.8e-08 61.2 42 59.5
arahy.Tifrunner.gnm1.ann1.P9H0TJ Arachis hypogaea HOM05D000765 ORTHO05D000613 7.8e-08 61.2 43 58.1
Medtr6g033580 Medicago truncatula HOM05D000765 ORTHO05D000613 7.8e-08 61.2 43 55.8
Psat1g098880 Pisum sativum HOM05D000765 ORTHO05D000613 1.0e-07 60.8 42 54.8
Glyma.02G075100 Glycine max HOM05D000765 ORTHO05D000613 1.3e-07 60.5 42 59.5
Glyma.16G157100 Glycine max HOM05D000765 ORTHO05D000613 1.7e-07 60.1 40 62.5
Sc23g0001090 Simmondsia chinensis HOM05D000765 ORTHO05D000613 1.7e-07 60.1 41 58.5
arahy.Tifrunner.gnm1.ann1.NRJP05 Arachis hypogaea HOM05D000765 ORTHO05D086639 2.3e-07 59.7 186 28.5
Lalb_Chr02g0150201 Lupinus albus HOM05D000765 ORTHO05D000613 2.3e-07 59.7 42 57.1
Ca_22655_v3 Cicer arietinum L. HOM05D000765 ORTHO05D000613 3.0e-07 59.3 41 56.1
Lalb_Chr21g0305701 Lupinus albus HOM05D000765 ORTHO05D000613 3.0e-07 59.3 42 57.1
Ca_05288_v3 Cicer arietinum L. HOM05D000765 ORTHO05D000613 3.9e-07 58.9 43 53.5
Ca_30104_v3 Cicer arietinum L. HOM05D000765 ORTHO05D000613 3.9e-07 58.9 43 53.5
PGR102G1532 Punica granatum HOM05D000765 ORTHO05D000613 3.9e-07 58.9 41 56.1
QL02p034182 Quercus lobata HOM05D000765 ORTHO05D000613 3.9e-07 58.9 41 53.7
Psat6g188160 Pisum sativum HOM05D000765 ORTHO05D000613 5.0e-07 58.5 42 57.1
Dinv41682 Davidia involucrata HOM05D000765 ORTHO05D000613 6.6e-07 58.2 50 46.0
Phvul.007G088200 Phaseolus vulgaris HOM05D000765 ORTHO05D000613 6.6e-07 58.2 42 54.8
VMungo0720G2404 Vigna mungo HOM05D000765 ORTHO05D000613 6.6e-07 58.2 42 54.8
Ca_10626_v3 Cicer arietinum L. HOM05D000765 ORTHO05D000613 8.6e-07 57.8 42 54.8
Glyma.10G217900 Glycine max HOM05D000765 ORTHO05D000613 8.6e-07 57.8 42 54.8
HanXRQChr09g0260111 Helianthus annuus HOM05D000765 ORTHO05D000613 8.6e-07 57.8 42 54.8
HanXRQChr09g0260171 Helianthus annuus HOM05D000765 ORTHO05D000613 8.6e-07 57.8 42 54.8
Lalb_Chr06g0161941 Lupinus albus HOM05D000765 ORTHO05D000613 8.6e-07 57.8 40 60.0
TPR.G36664 Trifolium pratense HOM05D000765 ORTHO05D000613 8.6e-07 57.8 42 54.8
Nn5g29133 Nelumbo nucifera HOM05D000765 ORTHO05D000613 1.1e-06 57.4 40 60.0
Ca_22657_v3 Cicer arietinum L. HOM05D000765 ORTHO05D000613 1.5e-06 57.0 41 53.7
Dinv41684 Davidia involucrata HOM05D000765 ORTHO05D000613 1.5e-06 57.0 41 53.7
Rhsim06G0098000 Rhododendron simsii HOM05D000765 ORTHO05D000613 1.5e-06 57.0 46 50.0
Aqoxy5G01950 Aquilegia oxysepala HOM05D000765 ORTHO05D000613 1.9e-06 56.6 50 48.0
AUR62004665 Chenopodium quinoa HOM05D000765 ORTHO05D000613 1.9e-06 56.6 43 53.5
ECA232G4114 Erigeron canadensis HOM05D000765 ORTHO05D000613 1.9e-06 56.6 42 54.8
Hma1.2p1_1634F.1_g294720 Hydrangea macrophylla HOM05D000765 ORTHO05D000613 1.9e-06 56.6 42 52.4
Lj5g0028064 Lotus japonicus HOM05D000765 ORTHO05D000613 1.9e-06 56.6 40 57.5
Actinidia33781 Actinidia chinensis HOM05D000765 ORTHO05D000613 2.5e-06 56.2 40 52.5
ATR0767G222 Amborella trichopoda HOM05D000765 ORTHO05D000613 2.5e-06 56.2 41 53.7
arahy.Tifrunner.gnm1.ann1.F0UME9 Arachis hypogaea HOM05D000765 ORTHO05D000613 2.5e-06 56.2 43 53.5
Lj2g0014784 Lotus japonicus HOM05D000765 ORTHO05D000613 2.5e-06 56.2 43 51.2
Lj5g0006816 Lotus japonicus HOM05D000765 ORTHO05D000613 2.5e-06 56.2 42 54.8
SEGI_29338 Sequoiadendron giganteum HOM05D000765 ORTHO05D000613 2.5e-06 56.2 40 50.0
Hma1.2p1_0855F.1_g229000 Hydrangea macrophylla HOM05D000765 ORTHO05D000613 3.3e-06 55.8 41 53.7
Rhsim11G0060500 Rhododendron simsii HOM05D000765 ORTHO05D000613 3.3e-06 55.8 43 48.8
Rhsim11G0060600 Rhododendron simsii HOM05D000765 ORTHO05D000613 3.3e-06 55.8 43 48.8
Rhsim11G0060700 Rhododendron simsii HOM05D000765 ORTHO05D000613 3.3e-06 55.8 43 48.8
Rhsim11G0061200 Rhododendron simsii HOM05D000765 ORTHO05D000613 3.3e-06 55.8 43 51.2
Rhsim11G0061500 Rhododendron simsii HOM05D000765 ORTHO05D000613 3.3e-06 55.8 43 51.2
Rhsim11G0062600 Rhododendron simsii HOM05D000765 ORTHO05D000613 3.3e-06 55.8 43 48.8
Rhsim11G0062900 Rhododendron simsii HOM05D000765 ORTHO05D000613 3.3e-06 55.8 43 51.2
Rhsim11G0063000 Rhododendron simsii HOM05D000765 ORTHO05D000613 3.3e-06 55.8 43 51.2
RhsimUnG0070100 Rhododendron simsii HOM05D000765 ORTHO05D000613 3.3e-06 55.8 43 48.8
TAR381G1056 Trochodendron aralioides HOM05D000765 ORTHO05D000613 3.3e-06 55.8 41 48.8
ATR0626G307 Amborella trichopoda HOM05D000765 ORTHO05D000613 4.3e-06 55.5 40 55.0
CiPaw.15G083000 Carya illinoinensis HOM05D000765 ORTHO05D000613 4.3e-06 55.5 41 51.2
Ca_22656_v3 Cicer arietinum L. HOM05D000765 ORTHO05D000613 4.3e-06 55.5 41 51.2
Lj6g0000263 Lotus japonicus HOM05D000765 ORTHO05D000613 4.3e-06 55.5 43 51.2
Manes.02G190300 Manihot esculenta HOM05D000765 ORTHO05D000613 4.3e-06 55.5 41 48.8
Manes.18G099400 Manihot esculenta HOM05D000765 ORTHO05D000613 4.3e-06 55.5 41 48.8
Oeu052426.1 Olea europaea HOM05D000765 ORTHO05D000613 4.3e-06 55.5 42 47.6
Oeu052427.1 Olea europaea HOM05D000765 ORTHO05D000613 4.3e-06 55.5 42 47.6
Sabra13G0097400 Salix brachista HOM05D000765 ORTHO05D000613 4.3e-06 55.5 42 47.6
Sabra19G0096400 Salix brachista HOM05D000765 ORTHO05D000613 4.3e-06 55.5 42 50.0
SHI09049 Sapria himalayana HOM05D000765 ORTHO05D000613 4.3e-06 55.5 41 48.8
vmacro00778 Vaccinium macrocarpon HOM05D000765 ORTHO05D000613 4.3e-06 55.5 43 48.8
EL10Ac1g00064 Beta vulgaris HOM05D000765 ORTHO05D000613 5.6e-06 55.1 43 51.2
CSS0005300 Camellia sinensis var. sinensis HOM05D000765 ORTHO05D000613 5.6e-06 55.1 40 50.0
CSS0026025 Camellia sinensis var. sinensis HOM05D000765 ORTHO05D000613 5.6e-06 55.1 49 44.9
Eucgr.F04144 Eucalyptus grandis HOM05D000765 ORTHO05D000613 5.6e-06 55.1 45 46.7
FvH4_2g40110 Fragaria vesca HOM05D000765 ORTHO05D000613 5.6e-06 55.1 41 46.3
Medtr1g096910 Medicago truncatula HOM05D000765 ORTHO05D000613 5.6e-06 55.1 42 52.4
TWI09G1122 Tripterygium wilfordii HOM05D000765 ORTHO05D000613 5.6e-06 55.1 41 53.7
vmacro00779 Vaccinium macrocarpon HOM05D000765 ORTHO05D000613 5.6e-06 55.1 43 48.8
vmacro12502 Vaccinium macrocarpon HOM05D000765 ORTHO05D000613 5.6e-06 55.1 42 47.6
arahy.Tifrunner.gnm1.ann1.RW3D4K Arachis hypogaea HOM05D000765 ORTHO05D000613 7.3e-06 54.7 40 52.5
arahy.Tifrunner.gnm1.ann1.YPX3YE Arachis hypogaea HOM05D000765 ORTHO05D000613 7.3e-06 54.7 40 52.5
Carub.0002s1867 Capsella rubella HOM05D000765 ORTHO05D000613 7.3e-06 54.7 42 50.0
Eucgr.F04138 Eucalyptus grandis HOM05D000765 ORTHO05D000613 7.3e-06 54.7 41 48.8
HanXRQChr02g0040601 Helianthus annuus HOM05D000765 ORTHO05D000613 7.3e-06 54.7 41 53.7
Potri.013G115200 Populus trichocarpa HOM05D000765 ORTHO05D000613 7.3e-06 54.7 40 50.0
Potri.019G085800 Populus trichocarpa HOM05D000765 ORTHO05D000613 7.3e-06 54.7 40 50.0
SMO364G0254 Selaginella moellendorffii HOM05D000765 ORTHO05D000613 7.3e-06 54.7 42 50.0
Actinidia23319 Actinidia chinensis HOM05D000765 ORTHO05D000613 9.5e-06 54.3 40 50.0
AL106U10010 Arabidopsis lyrata HOM05D000765 ORTHO05D000613 9.5e-06 54.3 42 52.4
AL2G31500 Arabidopsis lyrata HOM05D000765 ORTHO05D000613 9.5e-06 54.3 42 52.4
COL.COLO4_38322 Corchorus olitorius HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3
Duzib116G0518 Durio zibethinus HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3
Duzib177G0508 Durio zibethinus HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3
Duzib177G0621 Durio zibethinus HOM05D000765 ORTHO05D000613 9.5e-06 54.3 40 52.5
FvH4_5g04290 Fragaria vesca HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3
FvH4_5g04340 Fragaria vesca HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3
FAN04G3125 Fragaria x ananassa HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3
FAN18G1245 Fragaria x ananassa HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3
FAN18G3683 Fragaria x ananassa HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3
FAN18G3761 Fragaria x ananassa HOM05D000765 ORTHO05D000612 9.5e-06 54.3 41 46.3
Gohir.A02G060900 Gossypium hirsutum HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3
Gohir.D02G066400 Gossypium hirsutum HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3
Gorai.005G075300 Gossypium raimondii HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3
Lj5g0015734 Lotus japonicus HOM05D000765 ORTHO05D000613 9.5e-06 54.3 42 52.4
RcHm_v2.0_Chr6g0300631 Rosa chinensis HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 48.8
Thecc.08G201000 Theobroma cacao HOM05D000765 ORTHO05D000613 9.5e-06 54.3 40 52.5
Thecc.08G201200 Theobroma cacao HOM05D000765 ORTHO05D000613 9.5e-06 54.3 41 46.3


User provided reference genes

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