Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QP5CHE Arachis hypogaea HOM05D006603 ORTHO05D007786 2.6e-89 332.0 167 100.0
arahy.Tifrunner.gnm1.ann1.T2GGRX Arachis hypogaea HOM05D006603 ORTHO05D007786 6.5e-40 167.9 129 78.3
arahy.Tifrunner.gnm1.ann1.GIKJ41 Arachis hypogaea HOM05D006603 ORTHO05D007786 1.6e-38 163.3 129 76.7
Medtr1g045660 Medicago truncatula HOM05D006603 ORTHO05D007786 7.4e-28 127.9 126 63.5
Glyma.20G082000 Glycine max HOM05D006603 ORTHO05D007786 4.8e-27 125.2 128 62.5
Lj6g0018890 Lotus japonicus HOM05D006603 ORTHO05D007786 4.8e-27 125.2 128 62.5
Ca_25848_v3 Cicer arietinum L. HOM05D006603 ORTHO05D007786 2.4e-26 122.9 125 60.8
Phvul.007G231900 Phaseolus vulgaris HOM05D006603 ORTHO05D007786 4.1e-26 122.1 131 58.8
Psat6g018400 Pisum sativum HOM05D006603 ORTHO05D007786 3.4e-25 119.0 128 58.6
TPR.G23967 Trifolium pratense HOM05D006603 ORTHO05D007786 3.4e-25 119.0 124 59.7
Lalb_Chr03g0036931 Lupinus albus HOM05D006603 ORTHO05D007786 1.3e-24 117.1 128 58.6
arahy.Tifrunner.gnm1.ann1.YUK4FD Arachis hypogaea HOM05D006603 ORTHO05D007786 2.2e-24 116.3 108 64.8
Haze_11482 Corylus avellana HOM05D006603 ORTHO05D007786 1.4e-23 113.6 129 56.6
arahy.Tifrunner.gnm1.ann1.N50CGY Arachis hypogaea HOM05D006603 ORTHO05D007786 4.2e-23 112.1 103 67.0
arahy.Tifrunner.gnm1.ann1.49WF5R Arachis hypogaea HOM05D006603 ORTHO05D007786 5.5e-23 111.7 102 67.6
QL06p021600 Quercus lobata HOM05D006603 ORTHO05D007786 7.2e-23 111.3 129 55.0
Ciclev10006126m.g Citrus clementina HOM05D006603 ORTHO05D007786 9.4e-23 110.9 126 56.3
Thecc.04G267600 Theobroma cacao HOM05D006603 ORTHO05D007786 9.4e-23 110.9 127 55.1
Duzib151G0118 Durio zibethinus HOM05D006603 ORTHO05D007786 2.1e-22 109.8 125 56.0
Manes.03G157300 Manihot esculenta HOM05D006603 ORTHO05D007786 2.1e-22 109.8 125 56.8
TWI73G0993 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 2.1e-22 109.8 127 54.3
CiPaw.01G176600 Carya illinoinensis HOM05D006603 ORTHO05D007786 2.7e-22 109.4 128 54.7
arahy.Tifrunner.gnm1.ann1.M12JR8 Arachis hypogaea HOM05D006603 ORTHO05D007786 8.0e-22 107.8 110 63.6
MELO3C023048.2 Cucumis melo HOM05D006603 ORTHO05D007786 1.4e-21 107.1 124 54.0
Duzib212G0187 Durio zibethinus HOM05D006603 ORTHO05D007786 1.4e-21 107.1 128 52.3
Cfa014798 Carpinus fangiana HOM05D006603 ORTHO05D007786 1.8e-21 106.7 130 53.8
Sabra08G0132100 Salix brachista HOM05D006603 ORTHO05D007786 1.8e-21 106.7 134 53.7
CANSAT78G1588 Cannabis sativa HOM05D006603 ORTHO05D007786 2.3e-21 106.3 125 54.4
CsaV3_2G012360 Cucumis sativus L. HOM05D006603 ORTHO05D007786 3.0e-21 105.9 124 54.0
TWI09G1292 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 6.7e-21 104.8 127 55.1
BolC5t29054H Brassica oleracea HOM05D006603 ORTHO05D007786 3.3e-20 102.4 127 52.8
Dinv29792 Davidia involucrata HOM05D006603 ORTHO05D007786 4.4e-20 102.1 126 53.2
Gohir.A09G230800 Gossypium hirsutum HOM05D006603 ORTHO05D007786 4.4e-20 102.1 118 55.9
Gohir.D09G231900 Gossypium hirsutum HOM05D006603 ORTHO05D007786 4.4e-20 102.1 118 55.9
AL1G14230 Arabidopsis lyrata HOM05D006603 ORTHO05D007786 7.4e-20 101.3 127 55.9
BraA10t42567Z Brassica rapa HOM05D006603 ORTHO05D007786 7.4e-20 101.3 127 52.0
Sp1g03390 Schrenkiella parvula HOM05D006603 ORTHO05D007786 7.4e-20 101.3 128 51.6
THA.LOC104816009 Tarenaya hassleriana HOM05D006603 ORTHO05D007786 7.4e-20 101.3 128 53.1
MD16G1228700 Malus domestica HOM05D006603 ORTHO05D007786 1.3e-19 100.5 129 50.4
RcHm_v2.0_Chr4g0395941 Rosa chinensis HOM05D006603 ORTHO05D007786 1.3e-19 100.5 128 52.3
AT1G04555 Arabidopsis thaliana HOM05D006603 ORTHO05D007786 1.7e-19 100.1 127 54.3
Thhalv10009014m.g Eutrema salsugineum HOM05D006603 ORTHO05D007786 1.7e-19 100.1 128 53.9
FAN12G4195 Fragaria x ananassa HOM05D006603 ORTHO05D007786 2.8e-19 99.4 128 50.8
FvH4_4g05040 Fragaria vesca HOM05D006603 ORTHO05D007786 3.7e-19 99.0 128 51.6
Prupe.1G050700 Prunus persica HOM05D006603 ORTHO05D007786 3.7e-19 99.0 128 50.0
FAN17G1046 Fragaria x ananassa HOM05D006603 ORTHO05D007786 4.8e-19 98.6 128 50.8
BcaNung06560 Brassica carinata HOM05D006603 ORTHO05D007786 1.1e-18 97.4 126 51.6
Potri.008G173000 Populus trichocarpa HOM05D006603 ORTHO05D007786 1.1e-18 97.4 127 51.2
Potri.010G064500 Populus trichocarpa HOM05D006603 ORTHO05D007786 1.1e-18 97.4 127 51.2
CARHR003900 Cardamine hirsuta HOM05D006603 ORTHO05D007786 1.4e-18 97.1 127 52.8
TAR633G2131 Trochodendron aralioides HOM05D006603 ORTHO05D007786 1.8e-18 96.7 124 50.8
Carub.0001s0377 Capsella rubella HOM05D006603 ORTHO05D007786 2.4e-18 96.3 127 51.2
GSVIVG01027941001 Vitis vinifera HOM05D006603 ORTHO05D007786 2.4e-18 96.3 119 53.8
MBI10_g39247_MAGBIO Magnolia biondii HOM05D006603 ORTHO05D007786 3.1e-18 95.9 125 48.8
Sc25g0004840 Simmondsia chinensis HOM05D006603 ORTHO05D007786 3.1e-18 95.9 124 47.6
MD13G1223900 Malus domestica HOM05D006603 ORTHO05D007786 7.0e-18 94.7 128 46.9
Zm00001eb191430 Zea mays HOM05D006603 ORTHO05D007786 2.0e-17 93.2 134 46.3
Aqoxy2G03755 Aquilegia oxysepala HOM05D006603 ORTHO05D007786 2.6e-17 92.8 127 50.4
CSS0001604 Camellia sinensis var. sinensis HOM05D006603 ORTHO05D007786 2.6e-17 92.8 128 49.2
FAN22G1779 Fragaria x ananassa HOM05D006603 ORTHO05D007786 2.6e-17 92.8 128 48.4
EL10Ac3g06681 Beta vulgaris HOM05D006603 ORTHO05D007786 3.5e-17 92.4 124 49.2
PGR004G2303 Punica granatum HOM05D006603 ORTHO05D007786 4.5e-17 92.0 124 49.2
Aa31LG1G20320 Aethionema arabicum HOM05D006603 ORTHO05D007786 1.3e-16 90.5 123 52.0
Actinidia39936 Actinidia chinensis HOM05D006603 ORTHO05D007786 2.2e-16 89.7 126 46.8
Cpa.g.sc59.20 Carica papaya HOM05D006603 ORTHO05D007786 2.2e-16 89.7 73 65.8
Nitab4.5_0005154g0030 Nicotiana tabacum HOM05D006603 ORTHO05D007786 2.2e-16 89.7 119 47.9
ClCG06G007300 Citrullus lanatus HOM05D006603 ORTHO05D007786 2.9e-16 89.4 58 79.3
Actinidia11378 Actinidia chinensis HOM05D006603 ORTHO05D007786 3.8e-16 89.0 126 46.8
Hma1.2p1_0112F.1_g054890 Hydrangea macrophylla HOM05D006603 ORTHO05D007786 5.0e-16 88.6 123 49.6
Oeu059390.1 Olea europaea HOM05D006603 ORTHO05D007786 8.5e-16 87.8 142 42.3
CAN.G812.23 Capsicum annuum HOM05D006603 ORTHO05D007786 1.1e-15 87.4 119 47.1
Os02g0816700 Oryza sativa ssp. japonica HOM05D006603 ORTHO05D007786 1.1e-15 87.4 125 44.8
Manes.15G046500 Manihot esculenta HOM05D006603 ORTHO05D007786 1.5e-15 87.0 116 52.6
Cfa014800 Carpinus fangiana HOM05D006603 ORTHO05D007786 3.2e-15 85.9 56 76.8
Lsat_1_v5_gn_1_75441 Lactuca sativa HOM05D006603 ORTHO05D007786 3.2e-15 85.9 124 47.6
Peaxi162Scf00531g00210 Petunia axillaris HOM05D006603 ORTHO05D007786 4.2e-15 85.5 119 45.4
ECA248G1661 Erigeron canadensis HOM05D006603 ORTHO05D007786 5.5e-15 85.1 126 48.4
Hund22279 Selenicereus undatus HOM05D006603 ORTHO05D007786 5.5e-15 85.1 124 45.2
PGSC0003DMG400001502 Solanum tuberosum HOM05D006603 ORTHO05D007786 5.5e-15 85.1 119 45.4
vmacro15486 Vaccinium macrocarpon HOM05D006603 ORTHO05D007786 5.5e-15 85.1 137 43.8
ATR0787G168 Amborella trichopoda HOM05D006603 ORTHO05D007786 1.2e-14 84.0 124 45.2
Eucgr.H02902 Eucalyptus grandis HOM05D006603 ORTHO05D007786 1.2e-14 84.0 129 46.5
Sopen09g033770 Solanum pennellii HOM05D006603 ORTHO05D007786 1.2e-14 84.0 119 45.4
Solyc09g090820.4 Solanum lycopersicum HOM05D006603 ORTHO05D007786 1.6e-14 83.6 119 45.4
MSTRG.9849 Avicennia marina HOM05D006603 ORTHO05D007786 4.7e-14 82.0 124 43.5
BolC8t46924H Brassica oleracea HOM05D006603 ORTHO05D007786 4.7e-14 82.0 128 48.4
BolC8t46925H Brassica oleracea HOM05D006603 ORTHO05D007786 4.7e-14 82.0 128 48.4
C08p01190 Brassica napus HOM05D003335 ORTHO05D003853 8.0e-14 81.3 128 46.9
HanXRQChr01g0023081 Helianthus annuus HOM05D006603 ORTHO05D007786 8.0e-14 81.3 124 46.0
BcaC07g36903 Brassica carinata HOM05D006603 ORTHO05D007786 1.0e-13 80.9 128 46.9
BolC8t46928H Brassica oleracea HOM05D006603 ORTHO05D007786 1.0e-13 80.9 128 46.9
Cc03_g06500 Coffea canephora HOM05D006603 ORTHO05D007786 1.0e-13 80.9 120 45.8
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 1.8e-13 80.1 125 44.8
VMungo0720G0308 Vigna mungo HOM05D006603 ORTHO05D007786 1.8e-13 80.1 108 50.9
CDE04G0122 Ceratophyllum demersum HOM05D006603 ORTHO05D007786 2.3e-13 79.7 120 44.2
BolC8t46922H Brassica oleracea HOM05D006603 ORTHO05D007786 3.0e-13 79.3 128 46.1
BraA08t35589Z Brassica rapa HOM05D003335 ORTHO05D003853 3.0e-13 79.3 128 46.1
A08p36880 Brassica napus HOM05D006603 ORTHO05D007786 4.0e-13 79.0 128 46.1
BraA09t42112Z Brassica rapa HOM05D000117 ORTHO05D007786 4.0e-13 79.0 125 48.0
PSO210G0805 Papaver somniferum HOM05D006603 ORTHO05D007786 4.0e-13 79.0 125 44.8
Dinv27124 Davidia involucrata HOM05D006603 ORTHO05D007786 5.2e-13 78.6 76 59.2
Migut.G00559 Erythranthe guttata HOM05D006603 ORTHO05D007786 5.2e-13 78.6 124 42.7
BolC8t52747H Brassica oleracea HOM05D000117 ORTHO05D007786 1.5e-12 77.0 139 44.6
PSO210G7184 Papaver somniferum HOM05D006603 ORTHO05D007786 9.7e-12 74.3 127 44.1
SGA_v2.0_scaffold147G36268 Striga asiatica HOM05D006603 ORTHO05D007786 2.2e-11 73.2 125 44.0
HPP92_020757 Vanilla planifolia HOM05D006603 ORTHO05D007786 2.2e-11 73.2 51 70.6
Sed0025873 Sechium edule HOM05D006603 ORTHO05D007786 7.0e-10 68.2 100 48.0
C05p02730 Brassica napus HOM05D001210 ORTHO05D001036 1.2e-09 67.4 101 46.5
Gorai.006G254700 Gossypium raimondii HOM05D006603 ORTHO05D007786 6.5e-08 61.6 96 45.8
BcaB03g13488 Brassica carinata HOM05D006603 ORTHO05D007786 1.5e-07 60.5 109 43.1
COL.COLO4_15990 Corchorus olitorius HOM05D006603 ORTHO05D007786 3.2e-07 59.3 96 42.7
Sabra10G0042500 Salix brachista HOM05D006603 ORTHO05D007786 9.4e-07 57.8 101 42.6


User provided reference genes

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