Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 0.0e+00 1224.5 651 100.0
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 0.0e+00 1190.6 651 97.8
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 2.6e-254 882.1 647 73.9
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 6.7e-250 867.5 639 74.3
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 8.2e-248 860.5 639 74.0
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 1.8e-247 859.4 647 71.7
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 2.2e-245 852.4 641 73.0
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 3.0e-242 842.0 644 72.0
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 5.7e-241 837.8 646 70.6
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 5.7e-241 837.8 646 70.6
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 7.7e-238 827.4 642 71.2
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 5.1e-234 814.7 656 68.4
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 4.4e-233 811.6 645 69.5
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 2.8e-216 755.7 650 63.7
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 3.5e-214 748.8 650 63.5
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 5.9e-214 748.0 649 63.8
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 3.0e-210 735.7 649 63.3
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 8.8e-210 734.2 651 62.5
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 4.4e-209 731.9 650 63.7
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 4.4e-209 731.9 637 64.1
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.6e-206 723.4 638 63.3
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 1.0e-205 720.7 657 61.5
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 5.0e-205 718.4 650 62.3
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 3.6e-203 712.2 655 62.0
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 3.6e-203 712.2 639 61.5
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 4.7e-203 711.8 637 63.0
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 6.1e-203 711.4 655 61.8
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 6.1e-203 711.4 651 61.6
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 1.4e-202 710.3 647 61.2
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 1.8e-202 709.9 652 60.4
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.8e-202 709.9 639 61.7
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 1.8e-202 709.9 655 61.7
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.3e-202 709.5 639 61.7
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 4.0e-202 708.8 641 60.8
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.8e-202 708.0 638 61.3
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 8.3e-200 701.0 638 61.4
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 1.4e-199 700.3 650 61.5
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 7.0e-199 698.0 673 58.8
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 4.5e-198 695.3 673 60.0
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.9e-197 692.6 658 60.3
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 3.8e-197 692.2 658 60.2
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 5.0e-197 691.8 665 59.4
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 8.6e-197 691.0 649 59.9
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.9e-196 689.9 652 61.2
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 2.5e-196 689.5 661 58.9
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 3.3e-196 689.1 637 60.4
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.2e-195 687.2 640 60.3
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 6.8e-194 681.4 655 59.5
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.2e-193 680.6 649 59.2
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 1.5e-193 680.2 655 59.1
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 3.4e-193 679.1 633 60.0
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 2.2e-192 676.4 662 57.6
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 2.9e-192 676.0 646 59.3
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 1.1e-191 674.1 655 59.2
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 1.8e-191 673.3 648 59.1
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 3.2e-191 672.5 674 57.6
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 4.1e-191 672.2 639 59.3
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 7.0e-191 671.4 645 58.3
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 9.2e-191 671.0 638 59.4
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.7e-189 666.8 652 58.3
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 1.7e-189 666.8 660 57.7
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 6.6e-189 664.8 655 58.8
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 6.6e-189 664.8 677 56.3
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 4.3e-188 662.1 650 58.6
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 9.5e-188 661.0 645 57.8
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 1.8e-186 656.8 631 58.6
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 2.3e-186 656.4 674 55.9
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 4.0e-186 655.6 662 56.5
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 6.8e-186 654.8 673 55.6
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 6.8e-186 654.8 639 59.5
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 1.5e-185 653.7 646 56.8
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 2.6e-185 652.9 652 57.8
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 4.6e-182 642.1 640 58.6
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 3.6e-179 632.5 672 54.8
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 1.8e-178 630.2 638 57.7
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.8e-178 630.2 639 56.5
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 2.3e-178 629.8 674 54.5
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 3.1e-178 629.4 644 55.9
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 3.4e-177 625.9 659 54.6
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 6.6e-173 611.7 583 59.3
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 8.1e-171 604.7 570 59.6
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 6.8e-170 601.7 652 53.2
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 2.9e-168 596.3 641 54.8
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 4.9e-168 595.5 670 52.4
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 2.4e-167 593.2 651 52.7
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 4.1e-167 592.4 660 54.1
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.5e-164 583.9 666 51.8
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 9.9e-161 571.2 665 50.2
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 2.9e-160 569.7 668 50.4
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.9e-159 567.0 487 61.6
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 5.4e-159 565.5 665 48.7
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 9.3e-159 564.7 669 49.9
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 1.2e-158 564.3 664 51.4
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 8.7e-157 558.1 668 49.6
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 1.8e-154 550.4 661 48.9
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 4.5e-153 545.8 677 48.9
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 9.9e-153 544.7 661 48.1
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 1.1e-151 541.2 666 48.6
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 1.1e-151 541.2 671 48.4
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.9e-127 460.7 676 42.3
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 5.9e-121 439.1 379 64.9
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 6.1e-118 429.1 677 40.0
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 1.4e-114 417.9 698 39.0
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 1.6e-110 404.4 314 70.1
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 2.0e-108 397.5 619 41.4
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 1.1e-106 391.7 633 39.3
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 3.5e-105 386.7 644 41.6
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 5.9e-105 386.0 549 42.6
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 1.7e-99 367.9 352 58.2
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 1.3e-96 358.2 341 57.5
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 3.1e-90 337.0 314 59.2
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 4.4e-68 263.5 612 31.5
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 3.2e-66 257.3 223 61.9
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 1.1e-47 195.7 218 48.2
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.6e-41 175.3 239 39.7
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 7.3e-39 166.4 340 35.6
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 1.1e-37 162.5 279 39.1
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 2.4e-21 108.2 374 26.7
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 5.7e-15 87.0 196 30.1
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 2.6e-12 78.2 87 49.4
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 1.4e-08 65.9 227 28.6


User provided reference genes

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