Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QN3LZL Arachis hypogaea HOM05D005484 ORTHO05D006761 1.3e-76 289.7 143 100.0
arahy.Tifrunner.gnm1.ann1.9XN6EE Arachis hypogaea HOM05D005484 ORTHO05D006761 2.7e-34 149.1 83 88.0
arahy.Tifrunner.gnm1.ann1.TP1LAH Arachis hypogaea HOM05D005484 ORTHO05D006761 2.7e-34 149.1 83 88.0
TPR.G32384 Trifolium pratense HOM05D005484 ORTHO05D006761 1.0e-33 147.1 84 83.3
Lj3g0024733 Lotus japonicus HOM05D005484 ORTHO05D006761 1.3e-33 146.7 84 84.5
Ca_01692_v3 Cicer arietinum L. HOM05D005484 ORTHO05D006761 2.3e-33 146.0 84 84.5
Ca_30938_v3 Cicer arietinum L. HOM05D005484 ORTHO05D006761 2.3e-33 146.0 84 84.5
Lalb_Chr22g0350511 Lupinus albus HOM05D005484 ORTHO05D006761 2.3e-33 146.0 84 82.1
Medtr2g084565 Medicago truncatula HOM05D005484 ORTHO05D006761 1.1e-32 143.7 84 81.0
Psat5g253880 Pisum sativum HOM05D005484 ORTHO05D006761 1.5e-32 143.3 84 79.8
ClCG01G013990 Citrullus lanatus HOM05D005484 ORTHO05D006761 7.3e-32 141.0 84 79.8
RcHm_v2.0_Chr5g0055951 Rosa chinensis HOM05D005484 ORTHO05D006761 7.3e-32 141.0 84 79.8
MELO3C004840.2 Cucumis melo HOM05D005484 ORTHO05D006761 9.5e-32 140.6 84 78.6
Potri.009G151400 Populus trichocarpa HOM05D005484 ORTHO05D006761 2.1e-31 139.4 84 76.2
FAN16G1757 Fragaria x ananassa HOM05D005484 ORTHO05D006761 2.8e-31 139.0 84 78.6
FAN25G3300 Fragaria x ananassa HOM05D005484 ORTHO05D006761 2.8e-31 139.0 84 78.6
CsaV3_1G014320 Cucumis sativus L. HOM05D005484 ORTHO05D006761 3.6e-31 138.7 84 77.4
Sed0014392 Sechium edule HOM05D005484 ORTHO05D006761 3.6e-31 138.7 84 77.4
TAR623G0584 Trochodendron aralioides HOM05D005484 ORTHO05D006761 4.7e-31 138.3 84 78.6
THA.LOC104799526 Tarenaya hassleriana HOM05D005484 ORTHO05D006761 6.1e-31 137.9 84 76.2
CsaV3_4G022020 Cucumis sativus L. HOM05D005484 ORTHO05D006761 8.0e-31 137.5 83 78.3
AL6G33940 Arabidopsis lyrata HOM05D005484 ORTHO05D006761 1.0e-30 137.1 84 76.2
Thhalv10013483m.g Eutrema salsugineum HOM05D005484 ORTHO05D006761 1.0e-30 137.1 84 76.2
Phvul.005G128800 Phaseolus vulgaris HOM05D005484 ORTHO05D006761 1.0e-30 137.1 84 78.6
Glyma.13G320800 Glycine max HOM05D005484 ORTHO05D006761 1.4e-30 136.7 84 78.6
Nn2g13932 Nelumbo nucifera HOM05D005484 ORTHO05D006761 1.4e-30 136.7 84 78.6
VMungo1080G0291 Vigna mungo HOM05D005484 ORTHO05D006761 1.4e-30 136.7 84 77.4
FvH4_3g30160 Fragaria vesca HOM05D005484 ORTHO05D006761 1.8e-30 136.3 84 77.4
FAN11G2949 Fragaria x ananassa HOM05D005484 ORTHO05D006761 1.8e-30 136.3 84 77.4
GSVIVG01031426001 Vitis vinifera HOM05D005484 ORTHO05D006761 1.8e-30 136.3 84 76.2
Actinidia24166 Actinidia chinensis HOM05D005484 ORTHO05D006761 2.3e-30 136.0 84 76.2
AT5G22830 Arabidopsis thaliana HOM05D005484 ORTHO05D006761 2.3e-30 136.0 83 77.1
CARHR190740 Cardamine hirsuta HOM05D005484 ORTHO05D006761 2.3e-30 136.0 84 75.0
Gohir.D13G228400 Gossypium hirsutum HOM05D005484 ORTHO05D006761 3.0e-30 135.6 84 78.6
Gorai.013G259100 Gossypium raimondii HOM05D005484 ORTHO05D006761 3.0e-30 135.6 84 78.6
BcaB08g36405 Brassica carinata HOM05D005484 ORTHO05D006761 4.0e-30 135.2 84 73.8
BcaC04g19603 Brassica carinata HOM05D005484 ORTHO05D006761 4.0e-30 135.2 84 73.8
A10p18190 Brassica napus HOM05D005484 ORTHO05D006761 4.0e-30 135.2 84 73.8
C09p53800 Brassica napus HOM05D005484 ORTHO05D006761 4.0e-30 135.2 84 73.8
BolC9t58255H Brassica oleracea HOM05D005484 ORTHO05D006761 4.0e-30 135.2 84 73.8
BraA10t43894Z Brassica rapa HOM05D005484 ORTHO05D006761 4.0e-30 135.2 84 73.8
Carub.0006s2055 Capsella rubella HOM05D005484 ORTHO05D006761 4.0e-30 135.2 83 75.9
Hma1.2p1_0864F.1_g230060 Hydrangea macrophylla HOM05D005484 ORTHO05D006761 4.0e-30 135.2 84 75.0
Hma1.2p1_1447F.1_g284000 Hydrangea macrophylla HOM05D005484 ORTHO05D006761 4.0e-30 135.2 84 75.0
Sp6g22590 Schrenkiella parvula HOM05D005484 ORTHO05D006761 4.0e-30 135.2 84 73.8
Aa31LG1G12880 Aethionema arabicum HOM05D005484 ORTHO05D006761 5.2e-30 134.8 85 76.5
Dinv29402 Davidia involucrata HOM05D005484 ORTHO05D006761 5.2e-30 134.8 84 76.2
Sabra09G0119900 Salix brachista HOM05D005484 ORTHO05D006761 5.2e-30 134.8 84 73.8
Gohir.A13G223600 Gossypium hirsutum HOM05D005484 ORTHO05D006761 8.9e-30 134.0 84 77.4
CANSAT64G0117 Cannabis sativa HOM05D005484 ORTHO05D006761 1.2e-29 133.7 84 75.0
CANSAT64G0716 Cannabis sativa HOM05D005484 ORTHO05D006761 1.2e-29 133.7 84 75.0
COL.COLO4_19256 Corchorus olitorius HOM05D005484 ORTHO05D006761 1.2e-29 133.7 84 77.4
MD03G1131000 Malus domestica HOM05D005484 ORTHO05D006761 1.2e-29 133.7 84 76.2
Aqoxy1G01005 Aquilegia oxysepala HOM05D005484 ORTHO05D006761 1.5e-29 133.3 84 76.2
MD11G1153500 Malus domestica HOM05D005484 ORTHO05D006761 1.5e-29 133.3 84 76.2
Cfa010112 Carpinus fangiana HOM05D005484 ORTHO05D006761 2.0e-29 132.9 84 75.0
TWI31G0675 Tripterygium wilfordii HOM05D005484 ORTHO05D006761 2.0e-29 132.9 84 76.2
Peaxi162Scf00150g00079 Petunia axillaris HOM05D005484 ORTHO05D006761 2.6e-29 132.5 84 75.0
QL01p014158 Quercus lobata HOM05D005484 ORTHO05D006761 3.4e-29 132.1 84 75.0
CSS0041747 Camellia sinensis var. sinensis HOM05D005484 ORTHO05D006761 4.4e-29 131.7 84 73.8
Lj2A998T22 Lonicera japonica HOM05D005484 ORTHO05D006761 4.4e-29 131.7 83 74.7
Manes.04G011000 Manihot esculenta HOM05D005484 ORTHO05D006761 4.4e-29 131.7 84 73.8
Migut.N02528 Erythranthe guttata HOM05D005484 ORTHO05D006761 5.8e-29 131.3 84 75.0
Prupe.6G116100 Prunus persica HOM05D005484 ORTHO05D006761 5.8e-29 131.3 84 75.0
Cc01_g10030 Coffea canephora HOM05D005484 ORTHO05D006761 7.5e-29 131.0 84 72.6
Thecc.09G294600 Theobroma cacao HOM05D005484 ORTHO05D006761 7.5e-29 131.0 84 77.4
Glyma.12G180000 Glycine max HOM05D005484 ORTHO05D006761 9.8e-29 130.6 84 76.2
Nitab4.5_0000442g0140 Nicotiana tabacum HOM05D005484 ORTHO05D006761 9.8e-29 130.6 84 73.8
PGR119G0112 Punica granatum HOM05D005484 ORTHO05D006761 1.3e-28 130.2 84 73.8
vmacro03234 Vaccinium macrocarpon HOM05D005484 ORTHO05D006761 1.3e-28 130.2 84 72.6
Rhsim13G0103500 Rhododendron simsii HOM05D005484 ORTHO05D006761 1.7e-28 129.8 84 73.8
Actinidia07200 Actinidia chinensis HOM05D005484 ORTHO05D006761 2.2e-28 129.4 84 73.8
Oeu026994.1 Olea europaea HOM05D005484 ORTHO05D006761 2.2e-28 129.4 84 73.8
CiPaw.14G105100 Carya illinoinensis HOM05D005484 ORTHO05D006761 2.9e-28 129.0 84 72.6
DCAR_015491 Daucus carota HOM05D005484 ORTHO05D006761 3.7e-28 128.6 84 72.6
SGA_v2.0_scaffold466G52019 Striga asiatica HOM05D005484 ORTHO05D006761 4.9e-28 128.3 84 72.6
CDE06G0450 Ceratophyllum demersum HOM05D005484 ORTHO05D006761 6.4e-28 127.9 84 73.8
SalBow3G0456 Salvia bowleyana HOM05D005484 ORTHO05D006761 6.4e-28 127.9 84 70.2
MBI01_g19332_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 8.3e-28 127.5 84 75.0
Ciclev10028468m.g Citrus clementina HOM05D005484 ORTHO05D006761 1.1e-27 127.1 83 71.1
ATR0665G031 Amborella trichopoda HOM05D005484 ORTHO05D006761 1.4e-27 126.7 84 75.0
Sc06g0008870 Simmondsia chinensis HOM05D005484 ORTHO05D006761 1.4e-27 126.7 84 71.4
Manes.11G155200 Manihot esculenta HOM05D005484 ORTHO05D006761 1.8e-27 126.3 84 72.6
ECA238G0643 Erigeron canadensis HOM05D005484 ORTHO05D006761 2.4e-27 125.9 84 71.4
Duzib170G0418 Durio zibethinus HOM05D005484 ORTHO05D006761 3.2e-27 125.6 84 73.8
HanXRQChr14g0451871 Helianthus annuus HOM05D005484 ORTHO05D006761 3.2e-27 125.6 84 71.4
Solyc11g066660.3 Solanum lycopersicum HOM05D005484 ORTHO05D006761 4.1e-27 125.2 84 71.4
Sopen11g026390 Solanum pennellii HOM05D005484 ORTHO05D006761 4.1e-27 125.2 84 71.4
unitig_22.g6648 Utricularia gibba HOM05D005484 ORTHO05D006761 5.4e-27 124.8 84 72.6
CAN.G644.47 Capsicum annuum HOM05D005484 ORTHO05D006761 7.0e-27 124.4 84 71.4
PSO063G3820 Papaver somniferum HOM05D005484 ORTHO05D006761 7.0e-27 124.4 84 72.6
PSO339G5122 Papaver somniferum HOM05D005484 ORTHO05D006761 7.0e-27 124.4 84 72.6
Atru.chr3.3424 Acer truncatum HOM05D005484 ORTHO05D006761 9.2e-27 124.0 87 67.8
arahy.Tifrunner.gnm1.ann1.3CLD45 Arachis hypogaea HOM05D005484 ORTHO05D006761 1.2e-26 123.6 253 39.5
Lsat_1_v5_gn_2_96860 Lactuca sativa HOM05D005484 ORTHO05D006761 1.2e-26 123.6 84 69.0
Lsat_1_v5_gn_6_42460 Lactuca sativa HOM05D005484 ORTHO05D006761 2.7e-26 122.5 85 70.6
SEGI_15590 Sequoiadendron giganteum HOM05D005484 ORTHO05D006761 2.7e-26 122.5 84 70.2
EL10Ac9g21044 Beta vulgaris HOM05D005484 ORTHO05D006761 1.0e-25 120.6 84 69.0
ECA233G3593 Erigeron canadensis HOM05D005484 ORTHO05D006761 1.7e-25 119.8 85 70.6
arahy.Tifrunner.gnm1.ann1.F907EV Arachis hypogaea HOM05D005484 ORTHO05D006761 3.0e-25 119.0 83 75.9
Gohir.A09G086400 Gossypium hirsutum HOM05D005484 ORTHO05D006761 8.6e-25 117.5 84 70.2
Os03g0684400 Oryza sativa ssp. japonica HOM05D005484 ORTHO05D006761 1.1e-24 117.1 84 67.9
AUR62023974 Chenopodium quinoa HOM05D005484 ORTHO05D006761 1.5e-24 116.7 84 69.0
AUR62031772 Chenopodium quinoa HOM05D005484 ORTHO05D006761 1.5e-24 116.7 84 69.0
HanXRQChr02g0055131 Helianthus annuus HOM05D005484 ORTHO05D006761 1.5e-24 116.7 85 69.4
arahy.Tifrunner.gnm1.ann1.43PCVQ Arachis hypogaea HOM05D005484 ORTHO05D006761 1.9e-24 116.3 56 98.2
Gohir.D09G086420 Gossypium hirsutum HOM05D005484 ORTHO05D006761 1.9e-24 116.3 84 70.2
Gorai.006G102800 Gossypium raimondii HOM05D005484 ORTHO05D006761 1.9e-24 116.3 84 70.2
Eucgr.J00410 Eucalyptus grandis HOM05D005484 ORTHO05D006761 3.3e-24 115.5 84 69.0
arahy.Tifrunner.gnm1.ann1.W9NQ6G Arachis hypogaea HOM05D005484 ORTHO05D006761 7.3e-24 114.4 55 98.2
Haze_23498 Corylus avellana HOM05D005484 ORTHO05D006761 6.2e-23 111.3 83 69.9
arahy.Tifrunner.gnm1.ann1.76UAY3 Arachis hypogaea HOM05D005484 ORTHO05D006761 1.1e-22 110.5 60 88.3
arahy.Tifrunner.gnm1.ann1.G5FPRP Arachis hypogaea HOM05D005484 ORTHO05D006761 1.1e-22 110.5 60 88.3
arahy.Tifrunner.gnm1.ann1.RDY6U4 Arachis hypogaea HOM05D005484 ORTHO05D006761 1.1e-22 110.5 60 88.3
Zm00001eb053210 Zea mays HOM05D005484 ORTHO05D006761 2.3e-22 109.4 84 66.7
arahy.Tifrunner.gnm1.ann1.M9ALVS Arachis hypogaea HOM05D000309 ORTHO05D000271 4.0e-22 108.6 84 67.9
Cpa.g.sc47.33 Carica papaya HOM05D005484 ORTHO05D006761 1.2e-21 107.1 65 76.9
Ah.01g016150 Amaranthus hybridus HOM05D005484 ORTHO05D006761 4.4e-21 105.1 100 57.0
Duzib150G1233 Durio zibethinus HOM05D005484 ORTHO05D006761 1.6e-18 96.7 137 45.3
Oeu039852.1 Olea europaea HOM05D005484 ORTHO05D006761 4.6e-18 95.1 65 69.2
Pp3c25_90 Physcomitrium patens HOM05D005484 ORTHO05D006761 1.3e-17 93.6 84 59.5
Hund07725 Selenicereus undatus HOM05D005484 ORTHO05D006761 1.3e-17 93.6 64 67.2
Oeu044764.1 Olea europaea HOM05D005484 ORTHO05D006761 1.7e-17 93.2 64 68.8
HPP92_026475 Vanilla planifolia HOM05D005484 ORTHO05D006761 1.7e-17 93.2 137 45.3
Pp3c5_14300 Physcomitrium patens HOM05D005484 ORTHO05D006761 3.0e-17 92.4 84 57.1
Mapoly0034s0035 Marchantia polymorpha HOM05D005484 ORTHO05D006761 1.6e-15 86.7 84 54.8
AagrBONN_evm.TU.Sc2ySwM_228.452 Anthoceros agrestis HOM05D005484 ORTHO05D006761 2.3e-14 82.8 84 51.2
SMO114G0014 Selaginella moellendorffii HOM05D005484 ORTHO05D006761 1.2e-10 70.5 65 55.4
PRCOL_00001328 Prasinoderma coloniale HOM05D005484 ORTHO05D006761 7.3e-08 61.2 67 41.8
PGSC0003DMG401000463 Solanum tuberosum HOM05D005484 ORTHO05D006761 8.9e-06 54.3 42 57.1


User provided reference genes

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