Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QL50AS Arachis hypogaea HOM05D003351 ORTHO05D003806 2.9e-50 201.4 93 100.0
Medtr7g077400 Medicago truncatula HOM05D003351 ORTHO05D003806 8.6e-18 93.6 62 72.6
Psat0s3577g0040 Pisum sativum HOM05D003351 ORTHO05D003806 1.1e-17 93.2 62 71.0
Psat0s3577g0160 Pisum sativum HOM05D003351 ORTHO05D003806 1.9e-17 92.4 62 71.0
Manes.05G035200 Manihot esculenta HOM05D003351 ORTHO05D003806 2.5e-17 92.0 61 70.5
arahy.Tifrunner.gnm1.ann1.74QZJ8 Arachis hypogaea HOM05D003351 ORTHO05D003806 5.6e-17 90.9 75 68.0
arahy.Tifrunner.gnm1.ann1.UANN5Y Arachis hypogaea HOM05D003351 ORTHO05D003806 5.6e-17 90.9 62 67.7
Lj9A583T62 Lonicera japonica HOM05D003351 ORTHO05D003806 5.6e-17 90.9 61 68.9
Lj1g0000541 Lotus japonicus HOM05D003351 ORTHO05D003806 5.6e-17 90.9 61 67.2
TPR.G37800 Trifolium pratense HOM05D003351 ORTHO05D003806 5.6e-17 90.9 62 69.4
Gorai.007G099000 Gossypium raimondii HOM05D003351 ORTHO05D003806 7.3e-17 90.5 62 69.4
Psat0s3832g0080 Pisum sativum HOM05D003351 ORTHO05D003806 7.3e-17 90.5 62 69.4
Gohir.A11G088400 Gossypium hirsutum HOM05D003351 ORTHO05D003806 9.6e-17 90.1 61 70.5
Duzib138G1725 Durio zibethinus HOM05D003351 ORTHO05D003806 1.2e-16 89.7 61 68.9
Manes.01G257800 Manihot esculenta HOM05D003351 ORTHO05D003806 1.2e-16 89.7 61 67.2
Aqoxy7G00326 Aquilegia oxysepala HOM05D003351 ORTHO05D003806 1.6e-16 89.4 61 72.1
Dinv43809 Davidia involucrata HOM05D003351 ORTHO05D003806 1.6e-16 89.4 61 68.9
Lalb_Chr19g0126951 Lupinus albus HOM05D003351 ORTHO05D003806 1.6e-16 89.4 60 66.7
QL08p048991 Quercus lobata HOM05D003351 ORTHO05D003806 1.6e-16 89.4 61 70.5
CiPaw.01G060600 Carya illinoinensis HOM05D003351 ORTHO05D003806 2.1e-16 89.0 61 68.9
Gohir.D11G092700 Gossypium hirsutum HOM05D003351 ORTHO05D003806 2.1e-16 89.0 62 67.7
Phvul.008G065700 Phaseolus vulgaris HOM05D003351 ORTHO05D003806 2.8e-16 88.6 62 64.5
Psat0s3832g0040 Pisum sativum HOM05D003351 ORTHO05D003806 2.8e-16 88.6 62 69.4
Lalb_Chr17g0339681 Lupinus albus HOM05D003351 ORTHO05D003806 3.6e-16 88.2 61 68.9
GSVIVG01026913001 Vitis vinifera HOM05D003351 ORTHO05D003806 3.6e-16 88.2 61 68.9
Glyma.09G260200 Glycine max HOM05D003351 ORTHO05D003806 6.2e-16 87.4 61 65.6
Glyma.18G232000 Glycine max HOM05D003351 ORTHO05D003806 6.2e-16 87.4 61 65.6
TAR374G1710 Trochodendron aralioides HOM05D003351 ORTHO05D003806 6.2e-16 87.4 61 67.2
Duzib133G0362 Durio zibethinus HOM05D003351 ORTHO05D003806 8.1e-16 87.0 61 67.2
Ca_07910_v3 Cicer arietinum L. HOM05D003351 ORTHO05D003806 1.1e-15 86.7 62 66.1
COL.COLO4_12706 Corchorus olitorius HOM05D003351 ORTHO05D003806 1.4e-15 86.3 60 68.3
PSO478G5134 Papaver somniferum HOM05D003351 ORTHO05D003806 1.4e-15 86.3 60 68.3
DCAR_025188 Daucus carota HOM05D003351 ORTHO05D003806 1.8e-15 85.9 61 67.2
Thecc.01G360000 Theobroma cacao HOM05D003351 ORTHO05D003806 1.8e-15 85.9 61 65.6
Nn6g33439 Nelumbo nucifera HOM05D003351 ORTHO05D003806 2.4e-15 85.5 60 66.7
Rhsim13G0014400 Rhododendron simsii HOM05D003351 ORTHO05D003806 2.4e-15 85.5 61 67.2
Hund16926 Selenicereus undatus HOM05D003351 ORTHO05D003806 2.4e-15 85.5 51 80.4
Ciclev10020242m.g Citrus clementina HOM05D003351 ORTHO05D003806 3.1e-15 85.1 61 65.6
DCAR_015970 Daucus carota HOM05D003351 ORTHO05D003806 3.1e-15 85.1 61 65.6
QL08p048969 Quercus lobata HOM05D003351 ORTHO05D003806 3.1e-15 85.1 60 70.0
Atru.chr5.459 Acer truncatum HOM05D003351 ORTHO05D003806 4.0e-15 84.7 62 66.1
Sed0019127 Sechium edule HOM05D003351 ORTHO05D003806 4.0e-15 84.7 61 67.2
THA.LOC104814102 Tarenaya hassleriana HOM05D003351 ORTHO05D003806 4.0e-15 84.7 61 63.9
Aa31LG1G11070 Aethionema arabicum HOM05D003351 ORTHO05D003806 5.2e-15 84.3 61 67.2
CiPaw.01G060400 Carya illinoinensis HOM05D003351 ORTHO05D003806 5.2e-15 84.3 59 67.8
PSO782G5283 Papaver somniferum HOM05D003351 ORTHO05D003806 5.2e-15 84.3 60 68.3
TPR.G15034 Trifolium pratense HOM05D003351 ORTHO05D003806 5.2e-15 84.3 61 63.9
Actinidia33422 Actinidia chinensis HOM05D003351 ORTHO05D003806 6.8e-15 84.0 61 65.6
Lalb_Chr19g0126941 Lupinus albus HOM05D003351 ORTHO05D003806 6.8e-15 84.0 61 62.3
Solyc01g094530.4 Solanum lycopersicum HOM05D003351 ORTHO05D003806 6.8e-15 84.0 61 67.2
Solyc01g094550.3 Solanum lycopersicum HOM05D003351 ORTHO05D003806 6.8e-15 84.0 60 68.3
Sopen01g038340 Solanum pennellii HOM05D003351 ORTHO05D003806 6.8e-15 84.0 61 67.2
Sopen01g038360 Solanum pennellii HOM05D003351 ORTHO05D003806 6.8e-15 84.0 60 68.3
C05p00330 Brassica napus HOM05D003351 ORTHO05D003806 8.9e-15 83.6 61 65.6
CSS0020727 Camellia sinensis var. sinensis HOM05D003351 ORTHO05D003806 8.9e-15 83.6 61 67.2
PGSC0003DMG400000166 Solanum tuberosum HOM05D003351 ORTHO05D003806 8.9e-15 83.6 61 67.2
MSTRG.4857 Avicennia marina HOM05D003351 ORTHO05D003806 1.2e-14 83.2 62 64.5
MD01G1058300 Malus domestica HOM05D003351 ORTHO05D003806 1.2e-14 83.2 69 62.3
Nitab4.5_0008002g0030 Nicotiana tabacum HOM05D003351 ORTHO05D003806 1.2e-14 83.2 61 65.6
TWI59G0062 Tripterygium wilfordii HOM05D003351 ORTHO05D003806 1.2e-14 83.2 61 65.6
Carub.0001s0050 Capsella rubella HOM05D003351 ORTHO05D003806 1.5e-14 82.8 61 65.6
CARHR000630 Cardamine hirsuta HOM05D003351 ORTHO05D003806 1.5e-14 82.8 60 66.7
AUR62022554 Chenopodium quinoa HOM05D003351 ORTHO05D003806 1.5e-14 82.8 61 63.9
Thhalv10007689m.g Eutrema salsugineum HOM05D003351 ORTHO05D003806 1.5e-14 82.8 61 65.6
Glyma.03G009800 Glycine max HOM05D003351 ORTHO05D003806 1.5e-14 82.8 62 62.9
Glyma.18G232200 Glycine max HOM05D003351 ORTHO05D003806 1.5e-14 82.8 62 64.5
AT1G01710 Arabidopsis thaliana HOM05D003351 ORTHO05D003806 2.0e-14 82.4 61 63.9
EL10Ac1g00424 Beta vulgaris HOM05D003351 ORTHO05D003806 2.0e-14 82.4 65 61.5
Migut.N01442 Erythranthe guttata HOM05D003351 ORTHO05D003806 2.0e-14 82.4 62 62.9
Glyma.07G071300 Glycine max HOM05D003351 ORTHO05D003806 2.0e-14 82.4 62 61.3
Os04g0558400 Oryza sativa ssp. japonica HOM05D003351 ORTHO05D003806 2.0e-14 82.4 63 60.3
AL1G10650 Arabidopsis lyrata HOM05D003351 ORTHO05D003806 2.6e-14 82.0 61 63.9
BcaB03g13607 Brassica carinata HOM05D003351 ORTHO05D003806 2.6e-14 82.0 61 63.9
A10p00320 Brassica napus HOM05D003351 ORTHO05D003806 2.6e-14 82.0 61 63.9
BolC5t28825H Brassica oleracea HOM05D003351 ORTHO05D003806 2.6e-14 82.0 61 63.9
BraA10t42310Z Brassica rapa HOM05D003351 ORTHO05D003806 2.6e-14 82.0 61 63.9
Cc02_g37920 Coffea canephora HOM05D003351 ORTHO05D003806 2.6e-14 82.0 61 63.9
Nitab4.5_0005277g0030 Nicotiana tabacum HOM05D003351 ORTHO05D003806 2.6e-14 82.0 60 65.0
Peaxi162Scf00020g00237 Petunia axillaris HOM05D003351 ORTHO05D003806 2.6e-14 82.0 60 66.7
Cpa.g.sc18.250 Carica papaya HOM05D003351 ORTHO05D003806 3.4e-14 81.6 61 63.9
CDE11G0862 Ceratophyllum demersum HOM05D003351 ORTHO05D003806 3.4e-14 81.6 61 63.9
Sp1g00600 Schrenkiella parvula HOM05D003351 ORTHO05D003806 3.4e-14 81.6 61 63.9
CAN.G78.59 Capsicum annuum HOM05D003351 ORTHO05D003806 4.4e-14 81.3 61 63.9
Sp6g00550 Schrenkiella parvula HOM05D003351 ORTHO05D003806 4.4e-14 81.3 61 60.7
Sed0024794 Sechium edule HOM05D003351 ORTHO05D003806 4.4e-14 81.3 61 65.6
MELO3C006113.2 Cucumis melo HOM05D003351 ORTHO05D003806 5.8e-14 80.9 61 63.9
RcHm_v2.0_Chr1g0355121 Rosa chinensis HOM05D003351 ORTHO05D003806 5.8e-14 80.9 61 67.2
AUR62004348 Chenopodium quinoa HOM05D003351 ORTHO05D003806 7.6e-14 80.5 61 62.3
TPR.G14856 Trifolium pratense HOM05D003351 ORTHO05D003806 7.6e-14 80.5 61 60.7
HPP92_008506 Vanilla planifolia HOM05D003351 ORTHO05D003806 7.6e-14 80.5 61 60.7
Zm00001eb429310 Zea mays HOM05D003351 ORTHO05D003806 7.6e-14 80.5 62 59.7
CsaV3_3G008950 Cucumis sativus L. HOM05D003351 ORTHO05D003806 9.9e-14 80.1 61 62.3
Lsat_1_v5_gn_7_4420 Lactuca sativa HOM05D003351 ORTHO05D003806 9.9e-14 80.1 60 60.0
HanXRQChr04g0121601 Helianthus annuus HOM05D003351 ORTHO05D003806 1.3e-13 79.7 60 60.0
Potri.014G083300 Populus trichocarpa HOM05D003351 ORTHO05D003806 1.3e-13 79.7 61 63.9
SGA_v2.0_scaffold43G16419 Striga asiatica HOM05D003351 ORTHO05D003806 1.3e-13 79.7 62 62.9
Phvul.010G098200 Phaseolus vulgaris HOM05D003351 ORTHO05D003806 1.7e-13 79.3 61 63.9
vmacro23203 Vaccinium macrocarpon HOM05D003351 ORTHO05D003806 1.7e-13 79.3 60 63.3
Sc23g0002940 Simmondsia chinensis HOM05D003351 ORTHO05D003806 2.2e-13 79.0 61 59.0
PSO478G3804 Papaver somniferum HOM05D003351 ORTHO05D003806 2.9e-13 78.6 65 56.9
PSO782G0254 Papaver somniferum HOM05D003351 ORTHO05D003806 2.9e-13 78.6 65 55.4
SalBow5G0930 Salvia bowleyana HOM05D003351 ORTHO05D003806 2.9e-13 78.6 62 61.3
SalBow5G3927 Salvia bowleyana HOM05D003351 ORTHO05D003806 2.9e-13 78.6 62 61.3
VMungo0331G1844 Vigna mungo HOM05D003351 ORTHO05D003806 2.9e-13 78.6 61 63.9
FAN10G4309 Fragaria x ananassa HOM05D003351 ORTHO05D003806 3.8e-13 78.2 61 65.6
Lj3g0018331 Lotus japonicus HOM05D003351 ORTHO05D003806 3.8e-13 78.2 60 61.7
PSO478G2412 Papaver somniferum HOM05D003351 ORTHO05D003806 3.8e-13 78.2 61 59.0
Sabra14G0060600 Salix brachista HOM05D003351 ORTHO05D003806 3.8e-13 78.2 61 62.3
ECA236G4888 Erigeron canadensis HOM05D003351 ORTHO05D003806 4.9e-13 77.8 60 58.3
HanXRQChr04g0121591 Helianthus annuus HOM05D003351 ORTHO05D003806 4.9e-13 77.8 60 58.3
Ah.05g180660 Amaranthus hybridus HOM05D003351 ORTHO05D003806 6.4e-13 77.4 66 59.1
HanXRQChr06g0170081 Helianthus annuus HOM05D003351 ORTHO05D003806 6.4e-13 77.4 60 60.0
Psat4g154520 Pisum sativum HOM05D003351 ORTHO05D003806 6.4e-13 77.4 61 59.0
CARHR248670 Cardamine hirsuta HOM05D003351 ORTHO05D003806 8.4e-13 77.0 61 57.4
Medtr8g030920 Medicago truncatula HOM05D003351 ORTHO05D003806 8.4e-13 77.0 61 59.0
CANSAT56G4221 Cannabis sativa HOM05D003351 ORTHO05D003806 1.1e-12 76.6 61 60.7
FvH4_7g14192 Fragaria vesca HOM05D003351 ORTHO05D003806 1.1e-12 76.6 61 63.9
FAN06G3044 Fragaria x ananassa HOM05D003351 ORTHO05D003806 1.1e-12 76.6 61 63.9
BraA02t07405Z Brassica rapa HOM05D003351 ORTHO05D003806 1.4e-12 76.3 61 59.0
Hund27282 Selenicereus undatus HOM05D003351 ORTHO05D003806 1.4e-12 76.3 59 61.0
BcaB01g02197 Brassica carinata HOM05D003351 ORTHO05D003806 1.9e-12 75.9 61 57.4
C02p38000 Brassica napus HOM05D003351 ORTHO05D003806 1.9e-12 75.9 60 60.0
BolC2t09816H Brassica oleracea HOM05D003351 ORTHO05D003806 1.9e-12 75.9 60 60.0
Eucgr.E00141 Eucalyptus grandis HOM05D003351 ORTHO05D003806 1.9e-12 75.9 60 56.7
PSO782G2636 Papaver somniferum HOM05D003351 ORTHO05D003806 1.9e-12 75.9 65 53.8
MD01G1058600 Malus domestica HOM05D003351 ORTHO05D003806 2.4e-12 75.5 66 60.6
Prupe.2G169700 Prunus persica HOM05D003351 ORTHO05D003806 2.4e-12 75.5 61 62.3
BraA03t12385Z Brassica rapa HOM05D003351 ORTHO05D003806 3.2e-12 75.1 60 58.3
BcaC04g24162 Brassica carinata HOM05D003351 ORTHO05D003806 5.4e-12 74.3 60 56.7
BcaNung05354 Brassica carinata HOM05D003351 ORTHO05D003806 5.4e-12 74.3 60 56.7
A03p32150 Brassica napus HOM05D003351 ORTHO05D003806 5.4e-12 74.3 60 56.7
C03p39170 Brassica napus HOM05D003351 ORTHO05D003806 5.4e-12 74.3 60 56.7
BolC3t16188H Brassica oleracea HOM05D003351 ORTHO05D003806 5.4e-12 74.3 60 56.7
FAN06G4684 Fragaria x ananassa HOM05D003351 ORTHO05D003806 5.4e-12 74.3 59 64.4
PSO063G6511 Papaver somniferum HOM05D003351 ORTHO05D003806 5.4e-12 74.3 65 52.3
A02p24120 Brassica napus HOM05D003351 ORTHO05D003806 7.1e-12 73.9 60 58.3
Thhalv10029128m.g Eutrema salsugineum HOM05D003351 ORTHO05D003806 7.1e-12 73.9 61 55.7
DCAR_006927 Daucus carota HOM05D003351 ORTHO05D003806 9.3e-12 73.6 62 58.1
HanXRQChr06g0170071 Helianthus annuus HOM05D003351 ORTHO05D003806 2.1e-11 72.4 61 55.7
BcaC03g16040 Brassica carinata HOM05D003351 ORTHO05D003806 4.6e-11 71.2 60 56.7
Carub.0006s3675 Capsella rubella HOM05D003351 ORTHO05D003806 4.6e-11 71.2 61 54.1
Lsat_1_v5_gn_7_4460 Lactuca sativa HOM05D003351 ORTHO05D003806 6.0e-11 70.9 62 54.8
AT4G00520 Arabidopsis thaliana HOM05D003351 ORTHO05D003806 1.3e-10 69.7 61 54.1
BcaB01g02157 Brassica carinata HOM05D003351 ORTHO05D003806 2.3e-10 68.9 60 53.3
ATR0680G356 Amborella trichopoda HOM05D003351 ORTHO05D003806 3.0e-10 68.6 61 57.4
AL6G52960 Arabidopsis lyrata HOM05D003351 ORTHO05D003806 5.1e-10 67.8 61 54.1
Pp3c14_7450 Physcomitrium patens HOM05D003351 ORTHO05D003806 1.9e-09 65.9 63 49.2
SEGI_22600 Sequoiadendron giganteum HOM05D003351 ORTHO05D003806 1.3e-08 63.2 60 51.7
Aa31LG5G460 Aethionema arabicum HOM05D003351 ORTHO05D003806 4.8e-08 61.2 61 49.2
HanXRQChr04g0103041 Helianthus annuus HOM05D003351 ORTHO05D003806 4.8e-08 61.2 46 60.9
Aa31LG5G470 Aethionema arabicum HOM05D003351 ORTHO05D003806 6.2e-08 60.8 61 47.5
BcaC01g06871 Brassica carinata HOM05D003351 ORTHO05D003806 1.4e-07 59.7 60 50.0
Potri.002G159150 Populus trichocarpa HOM05D003351 ORTHO05D003806 1.4e-07 59.7 83 43.4
SMO147G0373 Selaginella moellendorffii HOM05D003351 ORTHO05D003806 1.8e-07 59.3 63 44.4
Pp3c12_25760 Physcomitrium patens HOM05D003351 ORTHO05D003806 5.3e-07 57.8 62 48.4
CAN.G78.57 Capsicum annuum HOM05D003351 ORTHO05D003806 2.6e-06 55.5 40 72.5
AagrBONN_evm.TU.Sc2ySwM_228.998 Anthoceros agrestis HOM05D003351 ORTHO05D003806 3.4e-06 55.1 62 45.2
Ca_23637_v3 Cicer arietinum L. HOM05D003351 ORTHO05D003806 3.4e-06 55.1 40 62.5
Pp3c10_19190 Physcomitrium patens HOM05D003351 ORTHO05D003806 9.9e-06 53.5 62 43.5


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