Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 7.4e-65 250.4 124 100.0
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 1.7e-37 159.5 133 63.2
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 1.7e-37 159.5 133 63.2
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 2.9e-37 158.7 133 62.4
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 3.8e-37 158.3 134 64.9
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 6.5e-37 157.5 133 63.9
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 8.5e-37 157.1 133 62.4
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 1.9e-36 156.0 133 63.2
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 2.5e-36 155.6 144 59.7
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 3.2e-36 155.2 147 58.5
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 5.5e-36 154.5 116 71.6
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 1.0e-34 150.2 133 57.1
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.0e-34 150.2 133 57.1
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.0e-34 150.2 133 57.1
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 1.4e-34 149.8 134 60.4
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 2.3e-34 149.1 148 55.4
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 2.3e-34 149.1 148 55.4
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 2.3e-34 149.1 148 57.4
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 2.3e-34 149.1 134 61.9
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 2.3e-34 149.1 133 57.9
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 2.3e-34 149.1 148 55.4
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 2.3e-34 149.1 147 55.8
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 3.0e-34 148.7 147 55.8
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 3.0e-34 148.7 133 60.2
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 3.9e-34 148.3 133 58.6
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 5.1e-34 147.9 133 60.9
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 6.7e-34 147.5 147 55.1
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 6.7e-34 147.5 148 56.8
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 8.8e-34 147.1 147 55.8
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 8.8e-34 147.1 133 57.1
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 8.8e-34 147.1 134 58.2
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 8.8e-34 147.1 133 59.4
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 8.8e-34 147.1 133 57.9
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 1.1e-33 146.7 133 59.4
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.5e-33 146.4 133 59.4
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 1.5e-33 146.4 133 59.4
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 2.0e-33 146.0 147 54.4
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 2.6e-33 145.6 148 54.1
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 3.3e-33 145.2 147 54.4
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 3.3e-33 145.2 134 58.2
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 4.4e-33 144.8 143 55.9
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 7.4e-33 144.1 133 57.1
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 7.4e-33 144.1 149 55.0
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 7.4e-33 144.1 147 53.7
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 1.3e-32 143.3 148 53.4
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 1.7e-32 142.9 148 54.1
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 2.2e-32 142.5 133 57.9
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 2.2e-32 142.5 133 57.9
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 2.2e-32 142.5 147 53.1
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 2.2e-32 142.5 130 56.9
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 2.2e-32 142.5 133 57.1
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 2.2e-32 142.5 148 54.1
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 3.7e-32 141.7 147 53.1
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 3.7e-32 141.7 147 53.1
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 4.8e-32 141.4 147 52.4
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 6.3e-32 141.0 133 57.1
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 6.3e-32 141.0 133 57.1
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 8.2e-32 140.6 134 56.0
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 1.1e-31 140.2 133 55.6
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 1.1e-31 140.2 147 52.4
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 1.1e-31 140.2 134 57.5
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 1.1e-31 140.2 133 56.4
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 1.4e-31 139.8 133 56.4
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 1.4e-31 139.8 130 56.9
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 2.4e-31 139.0 147 51.7
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 2.4e-31 139.0 133 62.4
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 2.4e-31 139.0 133 55.6
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 2.4e-31 139.0 148 53.4
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 3.1e-31 138.7 133 54.9
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 3.1e-31 138.7 133 55.6
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 3.1e-31 138.7 134 56.0
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 4.1e-31 138.3 128 57.0
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 4.1e-31 138.3 133 54.9
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 7.0e-31 137.5 114 62.3
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 1.2e-30 136.7 128 62.5
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 2.0e-30 136.0 134 52.2
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 4.5e-30 134.8 133 54.9
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 5.9e-30 134.4 130 56.2
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 5.9e-30 134.4 138 53.6
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 1.7e-29 132.9 118 55.1
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 2.2e-29 132.5 147 49.7
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 8.5e-29 130.6 117 57.3
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 1.9e-28 129.4 115 57.4
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 4.2e-28 128.3 102 70.6
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 7.2e-28 127.5 134 52.2
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 1.6e-27 126.3 102 69.6
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 4.7e-27 124.8 138 47.8
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 8.0e-27 124.0 140 48.6
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 4.0e-26 121.7 111 55.0
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 6.7e-26 120.9 113 54.0
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 1.5e-25 119.8 116 51.7
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 2.6e-25 119.0 118 52.5
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 1.3e-24 116.7 102 59.8
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 2.8e-24 115.5 116 50.9
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 1.1e-23 113.6 107 58.9
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 2.0e-22 109.4 108 61.1
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 3.5e-22 108.6 110 51.8
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 2.9e-21 105.5 124 53.2
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 3.8e-21 105.1 119 50.4
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 5.2e-18 94.7 74 66.2
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 4.4e-17 91.7 65 75.4
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 9.8e-17 90.5 59 72.9
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 2.2e-16 89.4 94 48.9
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 3.7e-16 88.6 65 69.2
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 5.4e-15 84.7 122 40.2
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 9.1e-15 84.0 54 70.4
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 9.1e-15 84.0 56 67.9
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 2.2e-13 79.3 102 52.9
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 7.2e-12 74.3 75 58.7
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 3.0e-10 68.9 146 38.4
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 5.2e-10 68.2 117 32.5
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 2.6e-09 65.9 58 48.3
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 4.4e-09 65.1 116 29.3
arahy.Tifrunner.gnm1.ann1.BU1ZSV Arachis hypogaea HOM05D006225 ORTHO05D084547 5.4e-07 58.2 54 59.3


User provided reference genes

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