Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea HOM05D006319 ORTHO05D007963 1.8e-102 375.9 190 100.0
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea HOM05D006319 ORTHO05D007963 8.0e-87 323.9 178 92.1
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 5.8e-77 291.2 164 90.9
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 1.9e-75 286.2 157 93.0
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 1.0e-73 280.4 157 91.1
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 1.3e-73 280.0 157 90.4
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea HOM05D006319 ORTHO05D007963 1.3e-68 263.5 159 87.4
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 7.1e-67 257.7 157 84.7
arahy.Tifrunner.gnm1.ann1.DSS8KU Arachis hypogaea HOM05D006319 ORTHO05D007963 1.3e-36 157.1 98 81.6
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 2.2e-36 156.4 151 62.3
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 2.9e-36 156.0 172 56.4
TPR.G33590 Trifolium pratense HOM05D001650 ORTHO05D001592 2.9e-36 156.0 151 60.3
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 6.5e-36 154.8 152 60.5
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 2.5e-35 152.9 165 57.0
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 7.1e-35 151.4 166 59.0
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 1.8e-33 146.7 165 55.8
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 6.7e-33 144.8 169 54.4
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 2.8e-31 139.4 160 54.4
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 1.2e-29 134.0 154 53.2
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.5e-29 133.7 177 48.0
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 4.5e-29 132.1 153 54.2
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 5.9e-29 131.7 163 50.3
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 3.8e-28 129.0 111 61.3
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 6.5e-28 128.3 75 88.0
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 8.4e-28 127.9 165 47.3
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 1.1e-27 127.5 145 49.7
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 1.9e-27 126.7 138 51.4
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 2.5e-27 126.3 75 81.3
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 9.3e-27 124.4 155 49.7
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 9.3e-27 124.4 156 52.6
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 2.7e-26 122.9 107 60.7
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 2.7e-26 122.9 124 54.8
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 3.5e-26 122.5 159 47.2
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 4.6e-26 122.1 163 46.6
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 4.6e-26 122.1 140 52.9
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 7.9e-26 121.3 135 48.1
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 7.9e-26 121.3 157 49.7
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 1.0e-25 120.9 107 60.7
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea HOM05D006319 ORTHO05D007963 1.8e-25 120.2 110 65.5
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 1.8e-25 120.2 110 58.2
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 3.0e-25 119.4 108 57.4
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 3.9e-25 119.0 155 45.2
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 3.9e-25 119.0 108 55.6
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 3.9e-25 119.0 124 52.4
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 8.7e-25 117.9 112 57.1
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 8.7e-25 117.9 152 44.7
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 1.1e-24 117.5 76 71.1
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 1.5e-24 117.1 109 54.1
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 1.9e-24 116.7 131 51.1
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 1.9e-24 116.7 117 54.7
Manes.12G147800 Manihot esculenta HOM05D006319 ORTHO05D007963 4.3e-24 115.5 118 55.9
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 4.3e-24 115.5 108 58.3
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 5.7e-24 115.2 143 46.9
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 7.4e-24 114.8 160 46.9
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 7.4e-24 114.8 113 56.6
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 9.7e-24 114.4 137 48.9
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 9.7e-24 114.4 114 52.6
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 9.7e-24 114.4 113 54.9
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 1.6e-23 113.6 75 69.3
FAN26G1803 Fragaria x ananassa HOM05D001650 ORTHO05D001592 1.6e-23 113.6 76 71.1
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 1.6e-23 113.6 110 56.4
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 2.2e-23 113.2 98 60.2
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 2.2e-23 113.2 110 56.4
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 2.8e-23 112.8 109 56.0
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 2.8e-23 112.8 130 50.0
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 3.7e-23 112.5 110 59.1
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 3.7e-23 112.5 158 45.6
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 3.7e-23 112.5 145 46.9
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 3.7e-23 112.5 150 46.0
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 4.8e-23 112.1 118 51.7
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 6.3e-23 111.7 81 63.0
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 1.1e-22 110.9 118 50.8
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 1.1e-22 110.9 118 50.8
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 1.8e-22 110.2 154 45.5
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 1.8e-22 110.2 128 50.8
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 2.4e-22 109.8 109 54.1
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 2.4e-22 109.8 121 50.4
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 3.1e-22 109.4 81 65.4
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 4.1e-22 109.0 143 48.3
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 4.1e-22 109.0 74 68.9
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 6.9e-22 108.2 141 46.8
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 6.9e-22 108.2 151 45.0
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 6.9e-22 108.2 151 45.0
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 6.9e-22 108.2 75 65.3
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 9.0e-22 107.8 129 48.8
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 9.0e-22 107.8 81 60.5
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 1.2e-21 107.5 107 54.2
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 1.2e-21 107.5 151 44.4
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 1.2e-21 107.5 151 43.7
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 1.2e-21 107.5 142 45.8
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 1.2e-21 107.5 74 64.9
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 1.5e-21 107.1 152 43.4
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 1.5e-21 107.1 116 52.6
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 2.0e-21 106.7 116 51.7
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 2.0e-21 106.7 113 52.2
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 2.0e-21 106.7 119 47.9
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 2.6e-21 106.3 80 66.2
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 2.6e-21 106.3 143 45.5
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 2.6e-21 106.3 75 66.7
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 3.4e-21 105.9 151 43.7
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 3.4e-21 105.9 109 51.4
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 4.5e-21 105.5 151 42.4
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 4.5e-21 105.5 83 59.0
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 4.5e-21 105.5 83 59.0
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 7.7e-21 104.8 130 47.7
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 2.2e-20 103.2 74 63.5
Potri.005G068500 Populus trichocarpa HOM05D006319 ORTHO05D007963 8.5e-20 101.3 146 45.9
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 2.5e-19 99.8 100 55.0
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 5.5e-19 98.6 121 47.1
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea HOM05D006319 ORTHO05D007963 1.6e-18 97.1 79 64.6
Os04g0434900 Oryza sativa ssp. japonica HOM05D006319 ORTHO05D007963 2.7e-18 96.3 69 65.2
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 1.0e-17 94.4 126 46.0
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 1.0e-17 94.4 100 50.0
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 8.8e-17 91.3 73 58.9
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 1.5e-16 90.5 100 48.0
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 3.7e-15 85.9 56 71.4
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 1.4e-14 84.0 75 54.7
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 4.1e-14 82.4 75 52.0
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 6.9e-14 81.6 54 68.5
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 2.0e-13 80.1 75 50.7
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 2.5e-11 73.2 61 55.7
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 7.2e-11 71.6 73 45.2
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 1.6e-10 70.5 48 68.8
CDE08G0611 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 6.1e-10 68.6 57 66.7
MBI17_g01556_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 5.7e-08 62.0 91 42.9
MBI11_g02539_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 4.8e-07 58.9 90 43.3


User provided reference genes

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