Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Q7CAJS Arachis hypogaea HOM05D015529 ORTHO05D015409 0.0e+00 1124.0 591 100.0
arahy.Tifrunner.gnm1.ann1.ZHX2UW Arachis hypogaea HOM05D015529 ORTHO05D015409 0.0e+00 1115.9 591 99.3
arahy.Tifrunner.gnm1.ann1.5I91Y5 Arachis hypogaea HOM05D015529 ORTHO05D015409 3.7e-263 911.4 572 87.9
arahy.Tifrunner.gnm1.ann1.VN6XRW Arachis hypogaea HOM05D015529 ORTHO05D015409 1.8e-209 733.0 579 71.8
arahy.Tifrunner.gnm1.ann1.1NC23U Arachis hypogaea HOM05D015529 ORTHO05D015409 5.4e-206 721.5 587 70.0
arahy.Tifrunner.gnm1.ann1.TST5GY Arachis hypogaea HOM05D015529 ORTHO05D015409 1.5e-192 676.8 456 83.1
arahy.Tifrunner.gnm1.ann1.R3FSDD Arachis hypogaea HOM05D015529 ORTHO05D015409 1.0e-87 328.6 497 47.7
Glyma.11G245500 Glycine max HOM05D013281 ORTHO05D003355 2.4e-41 174.5 767 29.3
Glyma.18G011700 Glycine max HOM05D013281 ORTHO05D003355 1.0e-39 169.1 768 28.4
Ca_25120_v3 Cicer arietinum L. HOM05D013281 ORTHO05D015409 5.5e-33 146.7 607 31.0
Phvul.001G257200 Phaseolus vulgaris HOM05D013281 ORTHO05D003355 1.5e-27 128.6 698 27.8
VMungo1383G2020 Vigna mungo HOM05D013281 ORTHO05D003355 7.6e-27 126.3 740 28.1
Lalb_Chr23g0277781 Lupinus albus HOM05D013281 ORTHO05D003355 2.1e-24 118.2 217 43.3
arahy.Tifrunner.gnm1.ann1.H40830 Arachis hypogaea HOM05D015529 ORTHO05D015409 9.1e-20 102.8 61 90.2
arahy.Tifrunner.gnm1.ann1.Q5MJGN Arachis hypogaea HOM05D015529 ORTHO05D015409 9.1e-20 102.8 61 90.2
Lalb_Chr11g0075591 Lupinus albus HOM05D013281 ORTHO05D015409 3.8e-18 97.4 331 33.8
TPR.G14234 Trifolium pratense HOM05D013281 ORTHO05D003355 2.5e-17 94.7 322 35.7
Psat5g094240 Pisum sativum HOM05D013281 ORTHO05D003355 7.9e-16 89.7 335 30.1
Medtr3g086220 Medicago truncatula HOM05D013281 ORTHO05D003355 1.4e-15 89.0 289 36.0
Medtr5g005950 Medicago truncatula HOM05D000172 ORTHO05D000273 3.3e-14 84.3 64 65.6
Psat0s2018g0120 Pisum sativum HOM05D000172 ORTHO05D000273 2.2e-13 81.6 65 61.5
Psat4g211400 Pisum sativum HOM05D000172 ORTHO05D000273 2.2e-13 81.6 65 61.5
Glyma.01G239100 Glycine max HOM05D000172 ORTHO05D000273 6.3e-13 80.1 64 60.9
TPR.G37983 Trifolium pratense HOM05D000172 ORTHO05D000273 1.4e-12 79.0 64 59.4
Thecc.06G215600 Theobroma cacao HOM05D000172 ORTHO05D000273 5.9e-11 73.6 64 53.1
Duzib235G1464 Durio zibethinus HOM05D000172 ORTHO05D000273 1.3e-10 72.4 64 53.1
Lj6A818T39 Lonicera japonica HOM05D005863 ORTHO05D003355 3.8e-10 70.9 478 24.7
Haze_12305 Corylus avellana HOM05D005863 ORTHO05D003355 8.5e-10 69.7 315 27.9
FvH4_3g25442 Fragaria vesca HOM05D000172 ORTHO05D000273 1.9e-09 68.6 64 45.3
VMungo1215G1711 Vigna mungo HOM05D000172 ORTHO05D000273 2.5e-09 68.2 64 53.1
FAN16G0295 Fragaria x ananassa HOM05D000172 ORTHO05D000273 5.5e-09 67.0 78 37.2
Prupe.4G024900 Prunus persica HOM05D000172 ORTHO05D000273 9.4e-09 66.2 64 43.8
RcHm_v2.0_Chr5g0003841 Rosa chinensis HOM05D000172 ORTHO05D000273 1.2e-08 65.9 70 44.3
Actinidia30696 Actinidia chinensis HOM05D005863 ORTHO05D003355 2.7e-08 64.7 96 47.9
Duzib268G1590 Durio zibethinus HOM05D005863 ORTHO05D003355 2.7e-08 64.7 452 26.3
Phvul.002G047300 Phaseolus vulgaris HOM05D000172 ORTHO05D000273 3.6e-08 64.3 64 53.1
Cfa000262 Carpinus fangiana HOM05D001306 ORTHO05D001159 4.7e-08 63.9 64 43.8
Lsat_1_v5_gn_1_128240 Lactuca sativa HOM05D000172 ORTHO05D000273 4.7e-08 63.9 65 40.0
Potri.011G025100 Populus trichocarpa HOM05D000172 ORTHO05D000273 4.7e-08 63.9 64 43.8
QL05p074693 Quercus lobata HOM05D001306 ORTHO05D001159 6.1e-08 63.5 64 45.3
Gohir.D09G069400 Gossypium hirsutum HOM05D000172 ORTHO05D000273 7.9e-08 63.2 64 48.4
Gorai.006G083600 Gossypium raimondii HOM05D000172 ORTHO05D000273 7.9e-08 63.2 64 48.4
Gohir.A09G069500 Gossypium hirsutum HOM05D000172 ORTHO05D000273 1.0e-07 62.8 64 48.4
Gorai.005G174200 Gossypium raimondii HOM05D005863 ORTHO05D003355 1.0e-07 62.8 427 25.1
Ciclev10018014m.g Citrus clementina HOM05D000172 ORTHO05D000273 1.8e-07 62.0 64 40.6
Peaxi162Scf00548g00065 Petunia axillaris HOM05D000172 ORTHO05D000273 1.8e-07 62.0 68 45.6
MD10G1315700 Malus domestica HOM05D000172 ORTHO05D000273 2.3e-07 61.6 83 39.8
SalBow8G2350 Salvia bowleyana HOM05D000172 ORTHO05D000273 2.3e-07 61.6 70 47.1
Prupe.3G218800 Prunus persica HOM05D000172 ORTHO05D000273 3.0e-07 61.2 83 36.1
Sed0006554 Sechium edule HOM05D005863 ORTHO05D003355 3.0e-07 61.2 236 30.1
Lj1g0026304 Lotus japonicus HOM05D000172 ORTHO05D000273 5.2e-07 60.5 64 45.3
QL03p055923 Quercus lobata HOM05D005863 ORTHO05D003355 5.2e-07 60.5 540 25.2
Rhsim06G0159500 Rhododendron simsii HOM05D000172 ORTHO05D000273 8.8e-07 59.7 190 30.0
Dinv17825 Davidia involucrata HOM05D001745 ORTHO05D001772 1.5e-06 58.9 70 45.7
Nn4g22491 Nelumbo nucifera HOM05D005863 ORTHO05D003355 1.5e-06 58.9 149 32.9
Sopen02g036950 Solanum pennellii HOM05D000172 ORTHO05D000273 1.5e-06 58.9 64 43.8
Actinidia26944 Actinidia chinensis HOM05D000172 ORTHO05D000273 2.0e-06 58.5 70 42.9
Thecc.02G268600 Theobroma cacao HOM05D005863 ORTHO05D003355 2.0e-06 58.5 444 25.5
CiPaw.10G068700 Carya illinoinensis HOM05D000172 ORTHO05D000273 2.6e-06 58.2 64 37.5
HanXRQChr11g0339021 Helianthus annuus HOM05D000172 ORTHO05D000273 3.3e-06 57.8 65 38.5
Oeu033886.1 Olea europaea HOM05D000172 ORTHO05D000273 3.3e-06 57.8 85 40.0
MBI18_g03011_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D000273 4.4e-06 57.4 64 42.2
GSVIVG01029848001 Vitis vinifera HOM05D000172 ORTHO05D000273 4.4e-06 57.4 70 40.0
PGSC0003DMG401021419 Solanum tuberosum HOM05D000172 ORTHO05D000273 5.7e-06 57.0 64 42.2
Peaxi162Scf00128g00645 Petunia axillaris HOM05D012928 ORTHO05D003355 7.4e-06 56.6 175 28.0
Rhsim06G0159600 Rhododendron simsii HOM05D000172 ORTHO05D000273 7.4e-06 56.6 110 33.6
RhsimUnG0011000 Rhododendron simsii HOM05D000172 ORTHO05D000273 7.4e-06 56.6 110 33.6
TAR624G1406 Trochodendron aralioides HOM05D000172 ORTHO05D000273 7.4e-06 56.6 85 37.6
TAR626G1837 Trochodendron aralioides HOM05D000172 ORTHO05D000273 7.4e-06 56.6 70 37.1
CSS0029564 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 9.7e-06 56.2 64 46.9
Gohir.A03G131400 Gossypium hirsutum HOM05D005863 ORTHO05D003355 9.7e-06 56.2 475 22.9
Nitab4.5_0000142g0050 Nicotiana tabacum HOM05D000172 ORTHO05D000273 9.7e-06 56.2 64 40.6
TAR383G0265 Trochodendron aralioides HOM05D000172 ORTHO05D000273 9.7e-06 56.2 64 37.5
TAR626G0491 Trochodendron aralioides HOM05D000172 ORTHO05D000273 9.7e-06 56.2 64 37.5


User provided reference genes

Program Settings