Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.7e-235 818.9 402 100.0
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 2.9e-219 765.0 409 93.9
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 3.3e-167 592.0 378 76.2
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 1.8e-165 586.3 376 75.3
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 8.0e-161 570.9 393 73.0
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 1.5e-159 566.6 387 73.6
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 8.0e-153 544.3 336 77.7
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 1.2e-151 540.4 332 78.0
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 4.3e-146 521.9 335 74.0
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 4.7e-145 518.5 330 74.5
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 4.7e-145 518.5 330 74.5
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 1.8e-144 516.5 391 66.8
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 6.8e-144 514.6 388 67.3
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 6.8e-144 514.6 385 66.8
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 8.9e-144 514.2 332 74.1
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.2e-143 513.8 386 66.6
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.5e-143 513.5 390 66.4
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 8.3e-142 507.7 390 65.9
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 1.1e-141 507.3 390 63.8
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.8e-141 506.5 327 72.2
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 3.2e-141 505.8 350 70.9
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 7.8e-140 501.1 344 69.5
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.0e-139 500.7 361 68.4
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.3e-139 500.4 341 69.8
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.7e-139 500.0 341 69.8
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 2.3e-139 499.6 343 70.3
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 3.0e-139 499.2 332 71.1
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 3.0e-139 499.2 341 69.8
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 5.6e-138 495.0 383 64.0
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 9.5e-138 494.2 393 62.8
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 4.7e-137 491.9 330 70.0
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 8.0e-137 491.1 330 71.5
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 1.8e-136 490.0 360 68.6
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.8e-136 490.0 405 60.7
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 5.8e-135 485.0 330 71.5
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 1.1e-133 480.7 372 64.2
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 1.4e-133 480.3 329 68.7
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 1.4e-133 480.3 331 68.3
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 2.4e-133 479.6 358 66.2
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 3.2e-133 479.2 332 69.6
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 4.1e-133 478.8 330 68.2
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 1.2e-132 477.2 350 66.9
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 3.5e-132 475.7 330 69.1
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 3.5e-132 475.7 330 69.1
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 4.6e-132 475.3 320 71.2
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 6.0e-132 474.9 415 58.8
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 2.3e-131 473.0 394 60.2
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 3.0e-131 472.6 334 69.5
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 3.0e-131 472.6 352 65.6
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 5.0e-131 471.9 336 66.7
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 6.6e-131 471.5 330 68.8
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 6.6e-131 471.5 330 69.1
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 1.1e-130 470.7 328 69.5
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 1.1e-130 470.7 358 64.5
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 1.9e-130 469.9 388 61.9
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 7.3e-130 468.0 330 69.4
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 1.2e-129 467.2 336 66.7
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 2.1e-129 466.5 328 68.0
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 3.6e-129 465.7 330 67.6
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 4.7e-129 465.3 329 67.5
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 6.2e-129 464.9 329 67.2
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 1.1e-128 464.2 330 68.5
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.1e-128 464.2 335 67.8
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 1.1e-128 464.2 395 59.7
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 2.3e-128 463.0 326 69.9
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 6.8e-128 461.5 370 60.3
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 6.8e-128 461.5 335 69.3
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 2.9e-126 456.1 329 65.7
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 8.3e-126 454.5 328 66.2
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 1.4e-125 453.8 343 64.7
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.6e-124 450.3 331 64.0
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 1.0e-123 447.6 374 61.2
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 2.6e-119 433.0 392 57.7
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 7.6e-119 431.4 316 64.6
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 1.7e-118 430.3 396 55.3
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 1.1e-117 427.6 336 60.4
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.4e-117 427.2 338 60.9
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 3.2e-117 426.0 337 61.1
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 7.8e-116 421.4 334 60.5
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 8.1e-113 411.4 388 56.7
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.1e-112 411.0 289 68.2
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.4e-112 410.6 325 63.1
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 4.0e-112 409.1 363 60.1
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 3.4e-111 406.0 328 61.6
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.7e-110 403.7 347 60.5
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 2.9e-110 402.9 325 62.2
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 6.4e-110 401.7 524 45.6
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 3.0e-107 392.9 263 69.2
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.3e-105 387.5 244 73.4
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 6.4e-102 375.2 319 57.1
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 1.1e-101 374.4 291 62.2
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 1.2e-100 370.9 305 61.3
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.0e-99 367.9 269 66.5
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 8.1e-89 331.6 336 49.7
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.5e-87 325.9 335 53.7
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 1.4e-85 320.9 333 48.9
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.9e-85 320.5 179 80.4
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 7.1e-85 318.5 379 47.5
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.2e-84 317.8 253 58.9
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 4.3e-74 282.7 331 45.3
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.5e-71 274.2 174 69.5
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 1.6e-60 237.7 352 39.8
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 3.6e-44 183.3 106 85.8
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 5.9e-39 166.0 145 55.2
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.0e-30 138.7 79 78.5
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.2e-23 115.2 99 59.6
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.7e-17 93.6 71 69.0
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 1.9e-13 81.3 100 44.0
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.3e-13 80.5 47 70.2
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.4e-11 75.1 50 64.0
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.0e-10 71.2 39 79.5
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 4.1e-08 63.5 52 67.3
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 1.7e-06 58.2 47 48.9


User provided reference genes

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