Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Q4LS46 Arachis hypogaea HOM05D000938 ORTHO05D001451 2.6e-65 251.9 125 100.0
arahy.Tifrunner.gnm1.ann1.GX4ZEE Arachis hypogaea HOM05D000938 ORTHO05D001451 1.2e-59 233.0 117 97.4
Glyma.05G194350 Glycine max HOM05D000938 ORTHO05D001451 1.8e-34 149.4 119 64.7
Ca_17622_v3 Cicer arietinum L. HOM05D000938 ORTHO05D001451 3.0e-34 148.7 117 65.8
Lalb_Chr07g0184261 Lupinus albus HOM05D000938 ORTHO05D001451 8.9e-34 147.1 122 63.1
Medtr8g494200 Medicago truncatula HOM05D000938 ORTHO05D001451 8.9e-34 147.1 120 63.3
Medtr0095s0080 Medicago truncatula HOM05D000938 ORTHO05D001451 2.6e-33 145.6 119 63.0
Lj4g0000059 Lotus japonicus HOM05D000938 ORTHO05D001451 8.3e-32 140.6 119 63.0
Glyma.08G002100 Glycine max HOM05D000938 ORTHO05D001451 2.0e-30 136.0 119 60.5
Psat7g045480 Pisum sativum HOM05D000938 ORTHO05D001451 3.5e-30 135.2 106 63.2
VMungo0251G2900 Vigna mungo HOM05D000938 ORTHO05D001451 2.9e-29 132.1 119 58.8
Glyma.06G156300 Glycine max HOM05D000938 ORTHO05D001451 6.6e-29 131.0 122 59.8
Phvul.002G274500 Phaseolus vulgaris HOM05D000938 ORTHO05D001451 6.6e-29 131.0 119 58.0
Glyma.04G209700 Glycine max HOM05D000938 ORTHO05D001451 9.5e-28 127.1 122 57.4
Phvul.009G154000 Phaseolus vulgaris HOM05D000938 ORTHO05D001451 2.8e-27 125.6 119 58.0
vmacro12751 Vaccinium macrocarpon HOM05D000938 ORTHO05D001451 2.3e-26 122.5 121 54.5
arahy.Tifrunner.gnm1.ann1.YKDH6D Arachis hypogaea HOM05D000938 ORTHO05D001451 1.5e-25 119.8 127 52.8
QL10p041154 Quercus lobata HOM05D000938 ORTHO05D001451 2.0e-25 119.4 118 58.5
CiPaw.03G117700 Carya illinoinensis HOM05D000938 ORTHO05D001451 2.6e-25 119.0 118 52.5
Dinv29655 Davidia involucrata HOM05D000938 ORTHO05D001451 5.8e-25 117.9 119 56.3
arahy.Tifrunner.gnm1.ann1.NKX1H6 Arachis hypogaea HOM05D000938 ORTHO05D001451 7.5e-25 117.5 127 52.8
Dinv12778 Davidia involucrata HOM05D000938 ORTHO05D001451 1.3e-24 116.7 116 54.3
Dinv36347 Davidia involucrata HOM05D000938 ORTHO05D001451 1.3e-24 116.7 119 57.1
Rhsim10G0127000 Rhododendron simsii HOM05D000938 ORTHO05D001451 1.3e-24 116.7 117 55.6
TWI75G1331 Tripterygium wilfordii HOM05D000938 ORTHO05D001451 2.2e-24 115.9 116 54.3
CiPaw.04G079100 Carya illinoinensis HOM05D000938 ORTHO05D001451 3.7e-24 115.2 117 53.0
VMungo1309G0230 Vigna mungo HOM05D000938 ORTHO05D001451 3.7e-24 115.2 120 52.5
arahy.Tifrunner.gnm1.ann1.KTYQ03 Arachis hypogaea HOM05D000938 ORTHO05D001451 1.1e-23 113.6 128 52.3
Lalb_Chr11g0068651 Lupinus albus HOM05D000938 ORTHO05D001451 1.1e-23 113.6 118 55.9
PGR119G0365 Punica granatum HOM05D000938 ORTHO05D001451 1.4e-23 113.2 118 55.1
Potri.005G068700 Populus trichocarpa HOM05D000938 ORTHO05D001451 4.1e-23 111.7 117 52.1
Cc02_g33890 Coffea canephora HOM05D000938 ORTHO05D001451 7.0e-23 110.9 116 53.4
Sabra05G0056100 Salix brachista HOM05D000938 ORTHO05D001451 2.0e-22 109.4 118 50.8
PGR119G1832 Punica granatum HOM05D000938 ORTHO05D001451 7.8e-22 107.5 121 50.4
arahy.Tifrunner.gnm1.ann1.RJ9TTJ Arachis hypogaea HOM05D000938 ORTHO05D001451 1.0e-21 107.1 122 50.8
TWI75G1557 Tripterygium wilfordii HOM05D000938 ORTHO05D001451 1.3e-21 106.7 112 52.7
Atru.chr4.1003 Acer truncatum HOM05D000938 ORTHO05D001451 3.0e-21 105.5 119 52.1
Manes.12G147100 Manihot esculenta HOM05D000938 ORTHO05D001451 3.0e-21 105.5 125 51.2
Nn5g28429 Nelumbo nucifera HOM05D000938 ORTHO05D001451 3.0e-21 105.5 119 46.2
Sabra05G0056000 Salix brachista HOM05D000938 ORTHO05D001451 3.9e-21 105.1 118 49.2
Duzib264G1224 Durio zibethinus HOM05D000938 ORTHO05D001451 5.0e-21 104.8 113 51.3
SGA_v2.0_scaffold273G46466 Striga asiatica HOM05D000938 ORTHO05D001451 1.1e-20 103.6 114 50.0
Duzib187G1406 Durio zibethinus HOM05D000938 ORTHO05D001451 1.9e-20 102.8 112 50.0
Potri.007G100600 Populus trichocarpa HOM05D000938 ORTHO05D001451 1.9e-20 102.8 120 49.2
CSS0009834 Camellia sinensis var. sinensis HOM05D000938 ORTHO05D001451 4.3e-20 101.7 123 52.0
Sabra07G0083200 Salix brachista HOM05D000938 ORTHO05D001451 9.5e-20 100.5 120 47.5
SGA_v2.0_scaffold54G19616 Striga asiatica HOM05D000938 ORTHO05D001451 9.5e-20 100.5 110 50.9
Solyc02g032850.3 Solanum lycopersicum HOM05D000938 ORTHO05D001451 2.1e-19 99.4 107 48.6
Migut.L00579 Erythranthe guttata HOM05D000938 ORTHO05D001451 3.6e-19 98.6 110 49.1
Actinidia06582 Actinidia chinensis HOM05D000938 ORTHO05D001451 1.1e-18 97.1 122 47.5
Lsat_1_v5_gn_5_82100 Lactuca sativa HOM05D000938 ORTHO05D001451 1.1e-18 97.1 126 43.7
Gohir.A05G381500 Gossypium hirsutum HOM05D000938 ORTHO05D001451 1.8e-18 96.3 111 50.5
TPR.G37403 Trifolium pratense HOM05D000938 ORTHO05D001451 1.8e-18 96.3 106 48.1
Gohir.D04G033800 Gossypium hirsutum HOM05D000938 ORTHO05D001451 2.3e-18 95.9 111 49.5
SGA_v2.0_scaffold107G30767 Striga asiatica HOM05D000938 ORTHO05D001451 2.3e-18 95.9 123 43.9
Gorai.012G038100 Gossypium raimondii HOM05D000938 ORTHO05D001451 4.0e-18 95.1 111 49.5
Cpa.g.sc37.13 Carica papaya HOM05D000938 ORTHO05D001451 5.2e-18 94.7 110 51.8
COL.COLO4_12066 Corchorus olitorius HOM05D000938 ORTHO05D001451 5.2e-18 94.7 107 53.3
FvH4_1g24940 Fragaria vesca HOM05D000938 ORTHO05D001451 5.2e-18 94.7 133 46.6
FAN19G2886 Fragaria x ananassa HOM05D000938 ORTHO05D001451 5.2e-18 94.7 133 46.6
FAN26G2282 Fragaria x ananassa HOM05D000938 ORTHO05D001451 5.2e-18 94.7 133 47.4
Sopen02g011180 Solanum pennellii HOM05D000938 ORTHO05D001451 6.8e-18 94.4 106 48.1
MSTRG.23491 Avicennia marina HOM05D000938 ORTHO05D001451 1.2e-17 93.6 106 50.0
PGSC0003DMG400019873 Solanum tuberosum HOM05D000938 ORTHO05D001451 1.2e-17 93.6 106 47.2
Migut.H00821 Erythranthe guttata HOM05D000938 ORTHO05D001451 1.5e-17 93.2 117 47.0
Migut.L00277 Erythranthe guttata HOM05D000938 ORTHO05D001451 2.0e-17 92.8 118 48.3
FAN23G2201 Fragaria x ananassa HOM05D000938 ORTHO05D001451 2.6e-17 92.4 133 47.4
TAR625G1159 Trochodendron aralioides HOM05D000938 ORTHO05D001451 3.4e-17 92.0 113 47.8
CANSAT01G1052 Cannabis sativa HOM05D000938 ORTHO05D001451 4.4e-17 91.7 124 45.2
ECA234G2409 Erigeron canadensis HOM05D000938 ORTHO05D001451 4.4e-17 91.7 127 44.1
Thecc.01G138400 Theobroma cacao HOM05D000938 ORTHO05D001451 5.8e-17 91.3 105 47.6
Ciclev10000576m.g Citrus clementina HOM05D000938 ORTHO05D001451 7.5e-17 90.9 122 49.2
Thecc.01G138600 Theobroma cacao HOM05D000938 ORTHO05D001451 2.2e-16 89.4 111 45.9
HanXRQChr10g0309421 Helianthus annuus HOM05D000938 ORTHO05D001451 3.7e-16 88.6 127 42.5
Nitab4.5_0006396g0010 Nicotiana tabacum HOM05D000938 ORTHO05D001451 3.7e-16 88.6 107 46.7
Prupe.4G276500 Prunus persica HOM05D000938 ORTHO05D001451 3.7e-16 88.6 129 43.4
Manes.12G159500 Manihot esculenta HOM05D000938 ORTHO05D001451 4.9e-16 88.2 115 47.8
SalBow7G1570 Salvia bowleyana HOM05D000938 ORTHO05D001451 1.4e-15 86.7 118 50.8
Oeu008233.1 Olea europaea HOM05D000938 ORTHO05D001451 4.1e-15 85.1 102 48.0
Sc09g0002220 Simmondsia chinensis HOM05D000938 ORTHO05D001451 7.0e-15 84.3 126 44.4
MD15G1136300 Malus domestica HOM05D000938 ORTHO05D001451 1.2e-14 83.6 126 45.2
PGR102G2206 Punica granatum HOM05D000938 ORTHO05D001451 1.2e-14 83.6 127 44.1
GSVIVG01022328001 Vitis vinifera HOM05D000938 ORTHO05D001451 1.2e-14 83.6 113 46.0
Aqoxy6G00324 Aquilegia oxysepala HOM05D000938 ORTHO05D001451 1.3e-13 80.1 122 41.0
Nn1g08978 Nelumbo nucifera HOM05D000938 ORTHO05D001451 5.1e-13 78.2 106 44.3
DCAR_019991 Daucus carota HOM05D000938 ORTHO05D001451 6.6e-13 77.8 119 40.3
AUR62006871 Chenopodium quinoa HOM05D000938 ORTHO05D001451 1.5e-12 76.6 122 43.4
Peaxi162Scf00331g01128 Petunia axillaris HOM05D000938 ORTHO05D001451 2.5e-12 75.9 105 41.0
RcHm_v2.0_Chr2g0122591 Rosa chinensis HOM05D000938 ORTHO05D001451 5.6e-12 74.7 102 47.1
Sed0022724 Sechium edule HOM05D000938 ORTHO05D001451 5.6e-12 74.7 106 42.5
EL10Ac4g09634 Beta vulgaris HOM05D000938 ORTHO05D001451 9.5e-12 73.9 103 41.7
ClCG04G001930 Citrullus lanatus HOM05D000938 ORTHO05D001451 9.5e-12 73.9 110 45.5
TPR.G40677 Trifolium pratense HOM05D000938 ORTHO05D001451 1.2e-11 73.6 63 58.7
THA.LOC104804461 Tarenaya hassleriana HOM05D000938 ORTHO05D001451 1.1e-10 70.5 118 38.1
Ah.06g191090 Amaranthus hybridus HOM05D000938 ORTHO05D001451 3.1e-10 68.9 108 40.7
AUR62000526 Chenopodium quinoa HOM05D000938 ORTHO05D001451 6.8e-10 67.8 110 41.8
CsaV3_4G030710 Cucumis sativus L. HOM05D000938 ORTHO05D001451 6.8e-10 67.8 108 41.7
Hund07231 Selenicereus undatus HOM05D000938 ORTHO05D001451 8.9e-10 67.4 116 39.7
MELO3C008938.2 Cucumis melo HOM05D000938 ORTHO05D001451 1.5e-09 66.6 109 42.2
MBI03_g28477_MAGBIO Magnolia biondii HOM05D001090 ORTHO05D008663 2.0e-09 66.2 105 42.9
TPR.G37429 Trifolium pratense HOM05D000938 ORTHO05D001451 9.9e-09 63.9 46 69.6
Aa31LG10G7470 Aethionema arabicum HOM05D000938 ORTHO05D001451 1.3e-08 63.5 112 34.8
BcaB01g00371 Brassica carinata HOM05D000938 ORTHO05D001451 1.7e-08 63.2 117 37.6
Carub.0005s1881 Capsella rubella HOM05D000938 ORTHO05D001451 6.4e-08 61.2 105 38.1
Carub.0006s2234 Capsella rubella HOM05D000938 ORTHO05D001451 2.4e-07 59.3 105 39.0
A09p45460 Brassica napus HOM05D000938 ORTHO05D001451 4.1e-07 58.5 117 34.2
Thhalv10011112m.g Eutrema salsugineum HOM05D000938 ORTHO05D001451 4.1e-07 58.5 116 35.3
BraA09t40007Z Brassica rapa HOM05D000938 ORTHO05D001451 5.4e-07 58.2 116 33.6
A04p06980 Brassica napus HOM05D000938 ORTHO05D001451 7.1e-07 57.8 116 33.6
Carub.0005s1882 Capsella rubella HOM05D000938 ORTHO05D001451 7.1e-07 57.8 105 39.0
C04p40610 Brassica napus HOM05D000938 ORTHO05D001451 9.2e-07 57.4 118 33.1
BolC8t50385H Brassica oleracea HOM05D000938 ORTHO05D001451 9.2e-07 57.4 119 36.1
BcaC02g09259 Brassica carinata HOM05D000938 ORTHO05D001451 1.2e-06 57.0 116 33.6
BcaC07g39604 Brassica carinata HOM05D000938 ORTHO05D001451 1.2e-06 57.0 116 33.6
BolC8t50383H Brassica oleracea HOM05D000938 ORTHO05D001451 1.2e-06 57.0 116 33.6
BcaC07g39605 Brassica carinata HOM05D000938 ORTHO05D001451 1.6e-06 56.6 112 35.7
C07p46950 Brassica napus HOM05D000938 ORTHO05D001451 1.6e-06 56.6 118 33.9
BolC7t45211H Brassica oleracea HOM05D000938 ORTHO05D001451 1.6e-06 56.6 118 33.9
BraA04t16397Z Brassica rapa HOM05D000938 ORTHO05D001451 1.6e-06 56.6 115 33.9
BcaC06g33388 Brassica carinata HOM05D000938 ORTHO05D001451 2.7e-06 55.8 116 34.5
C08p27630 Brassica napus HOM05D000938 ORTHO05D001451 2.7e-06 55.8 116 33.6
BcaB02g08570 Brassica carinata HOM05D000938 ORTHO05D001451 3.5e-06 55.5 117 33.3
BcaC06g32912 Brassica carinata HOM05D000938 ORTHO05D001451 4.6e-06 55.1 116 34.5
A03p48860 Brassica napus HOM05D000938 ORTHO05D001451 6.0e-06 54.7 118 33.1
BraA03t13987Z Brassica rapa HOM05D000938 ORTHO05D001451 6.0e-06 54.7 118 33.1


User provided reference genes

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