Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Q3JBH6 Arachis hypogaea HOM05D001695 ORTHO05D002735 1.4e-81 306.2 152 100.0
arahy.Tifrunner.gnm1.ann1.PL7EZQ Arachis hypogaea HOM05D001695 ORTHO05D002735 6.0e-69 264.2 188 76.6
VMungo0720G1092 Vigna mungo HOM05D001695 ORTHO05D002735 1.7e-34 149.8 109 66.1
Glyma.03G158000 Glycine max HOM05D001695 ORTHO05D002735 1.8e-33 146.4 130 58.5
Medtr7g095920 Medicago truncatula HOM05D001695 ORTHO05D002735 7.0e-33 144.4 151 48.3
Lalb_Chr01g0019951 Lupinus albus HOM05D001695 ORTHO05D002735 2.0e-32 142.9 157 54.1
Glyma.10G031100 Glycine max HOM05D001695 ORTHO05D002735 2.7e-32 142.5 141 53.9
Psat6g058200 Pisum sativum HOM05D001695 ORTHO05D002735 4.5e-32 141.7 151 49.0
MD11G1277000 Malus domestica HOM05D001695 ORTHO05D002735 1.0e-31 140.6 101 66.3
Glyma.02G143300 Glycine max HOM05D001695 ORTHO05D002735 1.3e-31 140.2 131 55.7
CiPaw.04G181000 Carya illinoinensis HOM05D001695 ORTHO05D002735 2.9e-31 139.0 135 57.8
MSTRG.21518 Avicennia marina HOM05D001695 ORTHO05D002735 6.5e-31 137.9 149 50.3
Lj1g0012318 Lotus japonicus HOM05D001695 ORTHO05D002735 6.5e-31 137.9 101 66.3
Phvul.001G155600 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 8.5e-31 137.5 123 57.7
MD03G1256200 Malus domestica HOM05D001695 ORTHO05D002735 1.1e-30 137.1 136 55.1
SalBow4G0856 Salvia bowleyana HOM05D001695 ORTHO05D002735 1.9e-30 136.3 116 57.8
Prupe.8G233300 Prunus persica HOM05D001695 ORTHO05D002735 2.5e-30 136.0 106 62.3
Lalb_Chr21g0306321 Lupinus albus HOM05D001695 ORTHO05D002735 3.2e-30 135.6 135 52.6
Manes.05G082900 Manihot esculenta HOM05D001695 ORTHO05D002735 4.2e-30 135.2 132 53.8
Phvul.007G175900 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 4.2e-30 135.2 127 56.7
GSVIVG01003138001 Vitis vinifera HOM05D001695 ORTHO05D002735 5.5e-30 134.8 104 66.3
Medtr1g471050 Medicago truncatula HOM05D001695 ORTHO05D002735 1.6e-29 133.3 153 47.7
Actinidia09097 Actinidia chinensis HOM05D001695 ORTHO05D002735 2.1e-29 132.9 152 46.1
MSTRG.18276 Avicennia marina HOM05D001695 ORTHO05D002735 2.1e-29 132.9 110 59.1
QL12p042507 Quercus lobata HOM05D001695 ORTHO05D002735 2.1e-29 132.9 154 49.4
Migut.D00346 Erythranthe guttata HOM05D001695 ORTHO05D002735 3.6e-29 132.1 127 50.4
TAR365G0574 Trochodendron aralioides HOM05D001695 ORTHO05D002735 4.7e-29 131.7 151 47.0
CANSAT25G1261 Cannabis sativa HOM05D001695 ORTHO05D002735 6.1e-29 131.3 135 54.8
arahy.Tifrunner.gnm1.ann1.Z2VWUQ Arachis hypogaea HOM05D001695 ORTHO05D002735 4.0e-28 128.6 129 53.5
CiPaw.03G256000 Carya illinoinensis HOM05D001695 ORTHO05D002735 4.0e-28 128.6 146 51.4
CSS0025398 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 8.8e-28 127.5 101 60.4
HanXRQChr13g0419591 Helianthus annuus HOM05D001695 ORTHO05D002735 1.5e-27 126.7 101 57.4
VMungo1383G2569 Vigna mungo HOM05D001695 ORTHO05D002735 1.5e-27 126.7 128 57.0
arahy.Tifrunner.gnm1.ann1.S9HU1U Arachis hypogaea HOM05D001695 ORTHO05D002735 2.0e-27 126.3 143 49.7
FAN20G2833 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.0e-27 126.3 102 59.8
DCAR_018439 Daucus carota HOM05D001695 ORTHO05D002735 2.6e-27 125.9 135 48.9
Atru.chr5.1541 Acer truncatum HOM05D001695 ORTHO05D002735 4.4e-27 125.2 97 66.0
FAN15G1129 Fragaria x ananassa HOM05D001695 ORTHO05D002735 4.4e-27 125.2 102 57.8
RcHm_v2.0_Chr6g0289711 Rosa chinensis HOM05D001695 ORTHO05D002735 4.4e-27 125.2 101 58.4
TWI12G0096 Tripterygium wilfordii HOM05D001695 ORTHO05D002735 4.4e-27 125.2 164 42.7
Thecc.01G269300 Theobroma cacao HOM05D001695 ORTHO05D002735 7.5e-27 124.4 98 61.2
FAN27G1986 Fragaria x ananassa HOM05D001695 ORTHO05D002735 9.8e-27 124.0 102 58.8
Cpa.g.sc1247.1 Carica papaya HOM05D001695 ORTHO05D002735 1.7e-26 123.2 145 44.8
Actinidia24930 Actinidia chinensis HOM05D001695 ORTHO05D002735 2.2e-26 122.9 151 42.4
Cc01_g18940 Coffea canephora HOM05D001695 ORTHO05D002735 2.2e-26 122.9 131 49.6
Potri.005G216400 Populus trichocarpa HOM05D001695 ORTHO05D002735 2.2e-26 122.9 146 49.3
ClCG07G000550 Citrullus lanatus HOM05D001695 ORTHO05D002735 4.8e-26 121.7 130 48.5
FvH4_2g22790 Fragaria vesca HOM05D001695 ORTHO05D002735 4.8e-26 121.7 101 58.4
TPR.G19108 Trifolium pratense HOM05D001695 ORTHO05D002735 4.8e-26 121.7 160 41.2
COL.COLO4_06098 Corchorus olitorius HOM05D001695 ORTHO05D002735 1.1e-25 120.6 106 53.8
FAN24G2593 Fragaria x ananassa HOM05D001695 ORTHO05D002735 1.8e-25 119.8 101 57.4
Sed0027528 Sechium edule HOM05D001695 ORTHO05D002735 1.8e-25 119.8 157 43.9
Atru.chr3.758 Acer truncatum HOM05D001695 ORTHO05D002735 3.1e-25 119.0 131 48.9
Dinv34556 Davidia involucrata HOM05D001695 ORTHO05D002735 4.1e-25 118.6 105 56.2
Ciclev10023937m.g Citrus clementina HOM05D001695 ORTHO05D002735 5.4e-25 118.2 165 40.6
MELO3C014318.2 Cucumis melo HOM05D001695 ORTHO05D002735 5.4e-25 118.2 132 47.0
Gohir.A07G208000 Gossypium hirsutum HOM05D001695 ORTHO05D002735 9.1e-25 117.5 133 48.9
Gohir.D07G214000 Gossypium hirsutum HOM05D001695 ORTHO05D002735 9.1e-25 117.5 133 48.9
CsaV3_2G013780 Cucumis sativus L. HOM05D001695 ORTHO05D002735 1.2e-24 117.1 104 53.8
DCAR_012509 Daucus carota HOM05D001695 ORTHO05D002735 1.2e-24 117.1 100 56.0
Gorai.001G242000 Gossypium raimondii HOM05D001695 ORTHO05D002735 1.2e-24 117.1 133 48.9
ECA236G1508 Erigeron canadensis HOM05D001695 ORTHO05D002735 4.5e-24 115.2 134 45.5
PGR044G2111 Punica granatum HOM05D001695 ORTHO05D002735 7.7e-24 114.4 119 49.6
Eucgr.K03319 Eucalyptus grandis HOM05D001695 ORTHO05D002735 1.3e-23 113.6 134 47.0
PSO461G0037 Papaver somniferum HOM05D001695 ORTHO05D002735 1.7e-23 113.2 105 55.2
Sed0003781 Sechium edule HOM05D001695 ORTHO05D002735 2.2e-23 112.8 106 50.9
Sabra05G0166000 Salix brachista HOM05D001695 ORTHO05D002735 3.8e-23 112.1 155 42.6
Solyc09g065750.3 Solanum lycopersicum HOM05D001695 ORTHO05D002735 6.5e-23 111.3 109 51.4
Zm00001eb114610 Zea mays HOM05D001695 ORTHO05D002735 6.5e-23 111.3 151 37.7
Haze_24517 Corylus avellana HOM05D001695 ORTHO05D002735 1.1e-22 110.5 157 44.6
Nn3g19467 Nelumbo nucifera HOM05D001695 ORTHO05D002735 1.1e-22 110.5 162 39.5
Zm00001eb114700 Zea mays HOM05D001695 ORTHO05D002735 1.1e-22 110.5 154 38.3
Potri.002G046500 Populus trichocarpa HOM05D001695 ORTHO05D002735 1.5e-22 110.2 104 51.0
Lsat_1_v5_gn_8_94460 Lactuca sativa HOM05D001695 ORTHO05D002735 1.9e-22 109.8 95 56.8
MBI11_g26137_MAGBIO Magnolia biondii HOM05D001695 ORTHO05D002735 2.5e-22 109.4 125 44.8
Aqoxy2G03493 Aquilegia oxysepala HOM05D001695 ORTHO05D002735 4.7e-21 105.1 111 44.1
ECA247G0338 Erigeron canadensis HOM05D001695 ORTHO05D002735 8.0e-21 104.4 136 39.7
Peaxi162Scf00165g00212 Petunia axillaris HOM05D001695 ORTHO05D002735 1.4e-20 103.6 121 43.8
THA.LOC104801253 Tarenaya hassleriana HOM05D001695 ORTHO05D002735 1.5e-19 100.1 158 36.7
PSO121G0001 Papaver somniferum HOM05D001695 ORTHO05D002735 2.0e-19 99.8 111 46.8
PSO210G5739 Papaver somniferum HOM05D001695 ORTHO05D002735 2.0e-19 99.8 111 46.8
PSO210G5800 Papaver somniferum HOM05D001695 ORTHO05D002735 2.0e-19 99.8 111 46.8
Thhalv10008499m.g Eutrema salsugineum HOM05D001695 ORTHO05D002735 4.4e-19 98.6 150 41.3
A09p68380 Brassica napus HOM05D001695 ORTHO05D002735 5.7e-19 98.2 103 49.5
BraA09t42174Z Brassica rapa HOM05D001695 ORTHO05D002735 5.7e-19 98.2 109 46.8
Aa31LG1G9480 Aethionema arabicum HOM05D001695 ORTHO05D002735 7.5e-19 97.8 104 46.2
Glyma.19G160300 Glycine max HOM05D001695 ORTHO05D002735 9.8e-19 97.4 72 68.1
Nitab4.5_0000187g0060 Nicotiana tabacum HOM05D001695 ORTHO05D002735 9.8e-19 97.4 109 45.0
Rhsim01G0271300 Rhododendron simsii HOM05D001695 ORTHO05D002735 2.2e-18 96.3 128 43.0
SEGI_39133 Sequoiadendron giganteum HOM05D001695 ORTHO05D002735 2.2e-18 96.3 97 44.3
TPR.G39069 Trifolium pratense HOM05D001695 ORTHO05D002735 2.2e-18 96.3 121 44.6
AT1G03055 Arabidopsis thaliana HOM05D001695 ORTHO05D002735 6.3e-18 94.7 120 43.3
Carub.0001s0219 Capsella rubella HOM05D001695 ORTHO05D002735 6.3e-18 94.7 118 44.1
BolC8t52811H Brassica oleracea HOM05D001695 ORTHO05D002735 8.3e-18 94.4 103 47.6
ECA247G1754 Erigeron canadensis HOM05D001695 ORTHO05D002735 1.4e-17 93.6 148 33.1
C08p52950 Brassica napus HOM05D001695 ORTHO05D002735 2.4e-17 92.8 103 47.6
CARHR002400 Cardamine hirsuta HOM05D001695 ORTHO05D002735 3.1e-17 92.4 119 45.4
AL1G12510 Arabidopsis lyrata HOM05D001695 ORTHO05D002735 5.4e-17 91.7 150 36.7
HanXRQChr15g0466931 Helianthus annuus HOM05D001695 ORTHO05D002735 7.0e-17 91.3 134 33.6
Sp1g02050 Schrenkiella parvula HOM05D001695 ORTHO05D002735 9.2e-17 90.9 103 47.6
CSS0041504 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 2.1e-13 79.7 53 66.0
BcaC07g42270 Brassica carinata HOM05D001695 ORTHO05D002735 3.6e-13 79.0 99 44.4
CSS0034323 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 4.7e-13 78.6 53 66.0
CSS0037037 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 4.7e-13 78.6 53 66.0
Oeu025777.1 Olea europaea HOM05D001695 ORTHO05D002735 1.4e-12 77.0 81 45.7
Lsat_1_v5_gn_9_7981 Lactuca sativa HOM05D001695 ORTHO05D002735 8.9e-12 74.3 116 31.0
Sc05g0001110 Simmondsia chinensis HOM05D001695 ORTHO05D002735 2.6e-11 72.8 95 36.8
PSO210G5923 Papaver somniferum HOM05D001695 ORTHO05D002735 2.2e-10 69.7 71 50.7
SMO145G0294 Selaginella moellendorffii HOM05D001695 ORTHO05D002735 1.4e-09 67.0 100 34.0
EL10Ac5g10482 Beta vulgaris HOM05D001695 ORTHO05D002735 2.0e-08 63.2 109 30.3
Lj2A1162G32 Lonicera japonica HOM05D001695 ORTHO05D002735 2.0e-08 63.2 48 66.7
Mapoly0052s0029 Marchantia polymorpha HOM05D001695 ORTHO05D002735 2.7e-08 62.8 98 34.7
AUR62032273 Chenopodium quinoa HOM05D001695 ORTHO05D002735 5.9e-08 61.6 73 38.4
AUR62011960 Chenopodium quinoa HOM05D001695 ORTHO05D002735 2.3e-07 59.7 67 40.3
Mapoly0034s0120 Marchantia polymorpha HOM05D001695 ORTHO05D002735 2.3e-07 59.7 99 27.3
SEGI_06911 Sequoiadendron giganteum HOM05D001695 ORTHO05D002735 3.0e-07 59.3 100 33.0
AagrBONN_evm.TU.Sc2ySwM_344.2007 Anthoceros agrestis HOM05D001695 ORTHO05D002735 1.5e-06 57.0 100 31.0
CBR_g8844 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-06 57.0 100 31.0
unitig_0.g1130 Utricularia gibba HOM05D001695 ORTHO05D002735 4.3e-06 55.5 115 32.2
AagrBONN_evm.TU.Sc2ySwM_228.2831 Anthoceros agrestis HOM05D001695 ORTHO05D002735 7.3e-06 54.7 102 25.5


User provided reference genes

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