Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Q06W8H Arachis hypogaea HOM05D005476 ORTHO05D006886 1.7e-232 808.9 398 100.0
Lalb_Chr17g0345081 Lupinus albus HOM05D005476 ORTHO05D006886 2.3e-136 489.6 381 65.9
arahy.Tifrunner.gnm1.ann1.70CJD0 Arachis hypogaea HOM05D005476 ORTHO05D006886 1.5e-135 486.9 239 98.7
LjContig00155g0002690 Lotus japonicus HOM05D005476 ORTHO05D006886 4.4e-135 485.3 383 64.8
Medtr5g070350 Medicago truncatula HOM05D005476 ORTHO05D006886 1.6e-132 476.9 381 64.6
Glyma.14G193500 Glycine max HOM05D005476 ORTHO05D006886 4.7e-129 465.3 385 63.6
Glyma.02G226600 Glycine max HOM05D005476 ORTHO05D006886 1.5e-127 460.3 384 62.8
Ca_05598_v3 Cicer arietinum L. HOM05D005476 ORTHO05D006886 1.7e-126 456.8 380 63.4
TPR.G5779 Trifolium pratense HOM05D005476 ORTHO05D006886 2.4e-125 453.0 377 62.1
Phvul.008G261400 Phaseolus vulgaris HOM05D005476 ORTHO05D006886 4.5e-124 448.7 383 61.1
Psat2g058600 Pisum sativum HOM05D005476 ORTHO05D006886 1.2e-119 434.1 362 61.3
Dinv14437 Davidia involucrata HOM05D005476 ORTHO05D006886 1.8e-117 426.8 386 60.4
TAR636G1181 Trochodendron aralioides HOM05D005476 ORTHO05D006886 9.5e-114 414.5 384 57.6
Dinv28640 Davidia involucrata HOM05D005476 ORTHO05D006886 1.8e-112 410.2 386 58.5
TAR633G0563 Trochodendron aralioides HOM05D005476 ORTHO05D006886 2.8e-110 402.9 375 57.3
CiPaw.13G077600 Carya illinoinensis HOM05D005476 ORTHO05D006886 4.9e-110 402.1 389 55.5
Potri.009G046200 Populus trichocarpa HOM05D005476 ORTHO05D006886 1.6e-108 397.1 384 55.5
Thecc.09G301800 Theobroma cacao HOM05D005476 ORTHO05D006886 4.5e-108 395.6 381 55.6
Cfa011695 Carpinus fangiana HOM05D005476 ORTHO05D006886 1.0e-107 394.4 384 54.9
Solyc06g076950.3 Solanum lycopersicum HOM05D005476 ORTHO05D006886 1.3e-107 394.0 385 57.7
Ciclev10028681m.g Citrus clementina HOM05D005476 ORTHO05D006886 1.7e-107 393.7 382 54.7
Sabra09G0033300 Salix brachista HOM05D005476 ORTHO05D006886 2.3e-107 393.3 381 55.6
PGSC0003DMG400030356 Solanum tuberosum HOM05D005476 ORTHO05D006886 2.9e-107 392.9 387 57.6
Haze_24322 Corylus avellana HOM05D005476 ORTHO05D006886 5.0e-107 392.1 368 56.8
CSS0011477 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 6.6e-107 391.7 382 58.4
COL.COLO4_19157 Corchorus olitorius HOM05D005476 ORTHO05D006886 8.6e-107 391.3 373 56.3
Nn2g13708 Nelumbo nucifera HOM05D005476 ORTHO05D006886 8.6e-107 391.3 354 59.6
CSS0028478 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 1.9e-106 390.2 382 58.1
Nitab4.5_0001806g0030 Nicotiana tabacum HOM05D005476 ORTHO05D006886 2.5e-106 389.8 383 56.7
Sopen06g033350 Solanum pennellii HOM05D005476 ORTHO05D006886 5.6e-106 388.7 384 56.8
QL01p038276 Quercus lobata HOM05D005476 ORTHO05D006886 7.3e-106 388.3 354 57.3
CiPaw.14G059600 Carya illinoinensis HOM05D005476 ORTHO05D006886 1.6e-105 387.1 369 56.9
RcHm_v2.0_Chr5g0069451 Rosa chinensis HOM05D005476 ORTHO05D006886 2.1e-105 386.7 392 53.1
Nitab4.5_0000010g0290 Nicotiana tabacum HOM05D005476 ORTHO05D006886 2.3e-104 383.3 385 56.9
Prupe.6G057500 Prunus persica HOM05D005476 ORTHO05D006886 6.8e-104 381.7 385 53.2
Atru.chr3.4220 Acer truncatum HOM05D005476 ORTHO05D006886 1.5e-103 380.6 383 54.3
Cpa.g.sc415.4 Carica papaya HOM05D005476 ORTHO05D006886 2.6e-103 379.8 401 52.9
Duzib168G1303 Durio zibethinus HOM05D005476 ORTHO05D006886 3.4e-103 379.4 347 57.1
Potri.001G251500 Populus trichocarpa HOM05D005476 ORTHO05D006886 3.4e-103 379.4 390 53.8
CANSAT25G3760 Cannabis sativa HOM05D005476 ORTHO05D006886 4.4e-103 379.0 381 54.9
CAN.G394.127 Capsicum annuum HOM05D005476 ORTHO05D006886 9.8e-103 377.9 385 55.1
Peaxi162Scf00540g00426 Petunia axillaris HOM05D005476 ORTHO05D006886 9.8e-103 377.9 379 56.7
Manes.01G161600 Manihot esculenta HOM05D005476 ORTHO05D006886 3.7e-102 375.9 396 53.0
MD11G1074700 Malus domestica HOM05D005476 ORTHO05D006886 8.3e-102 374.8 384 53.9
Gorai.006G106700 Gossypium raimondii HOM05D005476 ORTHO05D006886 1.4e-101 374.0 382 52.9
TWI79G0899 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 1.9e-101 373.6 383 53.3
TWI31G0160 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 2.4e-101 373.2 382 53.4
DCAR_007375 Daucus carota HOM05D005476 ORTHO05D006886 2.0e-100 370.2 383 53.5
vmacro02961 Vaccinium macrocarpon HOM05D005476 ORTHO05D006886 2.7e-100 369.8 450 49.3
Duzib170G1024 Durio zibethinus HOM05D005476 ORTHO05D006886 6.0e-100 368.6 390 52.6
MD03G1070700 Malus domestica HOM05D005476 ORTHO05D006886 1.0e-99 367.9 394 52.5
FAN16G3667 Fragaria x ananassa HOM05D005476 ORTHO05D006886 1.7e-99 367.1 384 52.6
VMungo0647G0678 Vigna mungo HOM05D005476 ORTHO05D006886 2.3e-99 366.7 292 64.0
Eucgr.B02253 Eucalyptus grandis HOM05D005476 ORTHO05D006886 3.9e-99 365.9 375 52.8
Manes.02G119400 Manihot esculenta HOM05D005476 ORTHO05D006886 5.0e-99 365.5 337 56.7
FvH4_3g38550 Fragaria vesca HOM05D005476 ORTHO05D006886 6.6e-99 365.2 384 52.3
Ah.08g221180 Amaranthus hybridus HOM05D005476 ORTHO05D006886 2.5e-98 363.2 394 51.8
FAN11G1091 Fragaria x ananassa HOM05D005476 ORTHO05D006886 3.3e-98 362.8 384 52.1
FAN21G0574 Fragaria x ananassa HOM05D005476 ORTHO05D006886 3.3e-98 362.8 384 51.8
GSVIVG01024740001 Vitis vinifera HOM05D005476 ORTHO05D006886 3.3e-98 362.8 385 53.0
Aqoxy2G00901 Aquilegia oxysepala HOM05D005476 ORTHO05D006886 1.2e-97 360.9 382 54.5
MBI14_g42907_MAGBIO Magnolia biondii HOM05D005476 ORTHO05D006886 2.1e-97 360.1 375 54.7
Lsat_1_v5_gn_9_20101 Lactuca sativa HOM05D005476 ORTHO05D006886 3.6e-97 359.4 374 54.3
AUR62001646 Chenopodium quinoa HOM05D005476 ORTHO05D006886 1.1e-96 357.8 381 53.5
Cc01_g14180 Coffea canephora HOM05D005476 ORTHO05D006886 1.4e-96 357.5 328 56.4
AUR62020130 Chenopodium quinoa HOM05D005476 ORTHO05D006886 2.3e-96 356.7 343 56.0
SGA_v2.0_scaffold146G36140 Striga asiatica HOM05D005476 ORTHO05D006886 2.3e-96 356.7 334 54.5
Rhsim13G0069500 Rhododendron simsii HOM05D005476 ORTHO05D006886 3.1e-96 356.3 388 52.6
THA.LOC104810712 Tarenaya hassleriana HOM05D005476 ORTHO05D006886 6.8e-96 355.1 349 54.7
FAN25G3001 Fragaria x ananassa HOM05D005476 ORTHO05D006886 2.6e-95 353.2 410 49.5
ECA247G2000 Erigeron canadensis HOM05D005476 ORTHO05D006886 5.8e-95 352.1 387 50.9
Hund18848 Selenicereus undatus HOM05D005476 ORTHO05D006886 5.8e-95 352.1 383 52.5
HanXRQChr04g0109161 Helianthus annuus HOM05D005476 ORTHO05D006886 7.5e-95 351.7 346 55.5
PSO801G0319 Papaver somniferum HOM05D005476 ORTHO05D006886 7.5e-95 351.7 386 52.3
SalBow2G2575 Salvia bowleyana HOM05D005476 ORTHO05D006886 9.8e-95 351.3 375 52.0
EL10Ac7g16167 Beta vulgaris HOM05D005476 ORTHO05D006886 1.3e-94 350.9 389 51.7
PSO339G1712 Papaver somniferum HOM05D005476 ORTHO05D006886 1.7e-94 350.5 391 52.2
Sed0016907 Sechium edule HOM05D005476 ORTHO05D006886 2.2e-94 350.1 376 52.1
Migut.N00789 Erythranthe guttata HOM05D005476 ORTHO05D006886 4.1e-93 345.9 375 52.0
SGA_v2.0_scaffold120G32912 Striga asiatica HOM05D005476 ORTHO05D006886 7.1e-93 345.1 333 52.6
ClCG03G000760 Citrullus lanatus HOM05D005476 ORTHO05D006886 3.5e-92 342.8 376 51.1
CDE04G1962 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 1.0e-91 341.3 363 50.7
PGR102G2402 Punica granatum HOM05D005476 ORTHO05D006886 1.7e-91 340.5 299 58.9
Nn2g11493 Nelumbo nucifera HOM05D005476 ORTHO05D006886 2.3e-91 340.1 283 62.2
Gohir.A09G090300 Gossypium hirsutum HOM05D005476 ORTHO05D006886 3.0e-91 339.7 300 59.0
Sed0014418 Sechium edule HOM05D005476 ORTHO05D006886 6.6e-91 338.6 371 51.2
Gohir.D09G090400 Gossypium hirsutum HOM05D005476 ORTHO05D006886 1.9e-90 337.0 300 59.0
MELO3C020550.2 Cucumis melo HOM05D005476 ORTHO05D006886 7.3e-90 335.1 350 52.9
BraA10t43679Z Brassica rapa HOM05D005476 ORTHO05D006886 1.2e-89 334.3 347 53.3
AL8G35010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 2.8e-89 333.2 360 51.1
Sc06g0008450 Simmondsia chinensis HOM05D005476 ORTHO05D006886 2.8e-89 333.2 381 50.1
SalBow5G1841 Salvia bowleyana HOM05D005476 ORTHO05D006886 4.7e-89 332.4 337 53.1
ATR0618G050 Amborella trichopoda HOM05D005476 ORTHO05D006886 8.1e-89 331.6 327 53.8
Carub.0008s1935 Capsella rubella HOM05D005476 ORTHO05D006886 8.1e-89 331.6 317 55.5
C09p50810 Brassica napus HOM05D005476 ORTHO05D006886 1.4e-88 330.9 343 52.8
Thhalv10014005m.g Eutrema salsugineum HOM05D005476 ORTHO05D006886 1.4e-88 330.9 346 52.9
Sp6g20420 Schrenkiella parvula HOM05D005476 ORTHO05D006886 1.8e-88 330.5 346 52.3
A10p15540 Brassica napus HOM05D005476 ORTHO05D006886 2.3e-88 330.1 343 53.1
BolC9t57941H Brassica oleracea HOM05D005476 ORTHO05D006886 3.1e-88 329.7 343 52.8
AT5G58730 Arabidopsis thaliana HOM05D005476 ORTHO05D006886 4.0e-88 329.3 355 51.5
CARHR272640 Cardamine hirsuta HOM05D005476 ORTHO05D006886 2.6e-87 326.6 348 51.7
Aa31LG11G490 Aethionema arabicum HOM05D005476 ORTHO05D006886 3.4e-87 326.2 320 54.1
HPP92_002247 Vanilla planifolia HOM05D005476 ORTHO05D006886 1.3e-86 324.3 335 54.6
unitig_8.g3687 Utricularia gibba HOM05D005476 ORTHO05D006886 4.1e-85 319.3 340 50.6
unitig_22.g5210 Utricularia gibba HOM05D005476 ORTHO05D006886 7.1e-85 318.5 361 49.9
BcaC04g19834 Brassica carinata HOM05D005476 ORTHO05D006886 2.7e-84 316.6 343 51.0
CsaV3_1G036180 Cucumis sativus L. HOM05D005476 ORTHO05D006886 4.3e-82 309.3 303 54.8
Os03g0737701 Oryza sativa ssp. japonica HOM05D005476 ORTHO05D006886 1.2e-79 301.2 343 50.4
CDE02G0680 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 1.3e-78 297.7 307 52.4
SHI19142 Sapria himalayana HOM05D005476 ORTHO05D006886 2.2e-78 297.0 354 47.2
SalBow8G4850 Salvia bowleyana HOM05D005476 ORTHO05D006886 1.9e-77 293.9 337 49.3
Zm00001eb056490 Zea mays HOM05D005476 ORTHO05D006886 6.6e-75 285.4 298 53.0
Oeu013433.3 Olea europaea HOM05D005476 ORTHO05D006886 2.5e-74 283.5 286 54.9
Lj1A137G45 Lonicera japonica HOM05D005476 ORTHO05D006886 1.3e-65 254.6 304 50.7
Mapoly0060s0007 Marchantia polymorpha HOM05D005476 ORTHO05D006886 2.4e-64 250.4 299 45.5
Pp3c1_3930 Physcomitrium patens HOM05D005476 ORTHO05D006886 3.8e-62 243.0 310 43.9
SEGI_26423 Sequoiadendron giganteum HOM05D005476 ORTHO05D006886 8.4e-62 241.9 296 45.6
Pp3c7_18020 Physcomitrium patens HOM05D005476 ORTHO05D006886 2.4e-61 240.4 304 44.4
AagrBONN_evm.TU.Sc2ySwM_362.363 Anthoceros agrestis HOM05D005476 ORTHO05D006886 7.1e-61 238.8 286 47.2
Oeu000377.2 Olea europaea HOM05D005476 ORTHO05D006886 1.1e-58 231.5 276 50.7
SMO329G0019 Selaginella moellendorffii HOM05D005476 ORTHO05D006886 1.6e-57 227.6 279 45.5
CBR_g23861 Chara braunii HOM05D005476 ORTHO05D006886 1.4e-53 214.5 281 43.1
arahy.Tifrunner.gnm1.ann1.Y3WSKM Arachis hypogaea HOM05D005476 ORTHO05D006886 1.2e-52 211.5 116 92.2
AL1010U10010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 2.1e-52 210.7 220 51.8
Gohir.D05G089750 Gossypium hirsutum HOM05D005476 ORTHO05D006886 3.1e-48 196.8 163 57.7
A03p12050 Brassica napus HOM05D005476 ORTHO05D006886 3.2e-37 160.2 176 50.0
HanXRQChr16g0507541 Helianthus annuus HOM05D005476 ORTHO05D006886 1.3e-25 121.7 89 62.9
RcHm_v2.0_Chr6g0276161 Rosa chinensis HOM05D005476 ORTHO05D006886 1.6e-23 114.8 152 48.0
RcHm_v2.0_Chr7g0201761 Rosa chinensis HOM05D005476 ORTHO05D006886 1.6e-20 104.8 137 46.7
SalBow8G2493 Salvia bowleyana HOM05D005476 ORTHO05D006886 1.5e-18 98.2 191 36.6
BraA03t10517Z Brassica rapa HOM05D005476 ORTHO05D006886 4.8e-17 93.2 107 48.6
Actinidia23243 Actinidia chinensis HOM05D005476 ORTHO05D006886 2.7e-15 87.4 77 61.0
C03p15890 Brassica napus HOM05D000062 ORTHO05D021669 1.3e-14 85.1 123 43.1
BolC3t14020H Brassica oleracea HOM05D000062 ORTHO05D006886 1.3e-14 85.1 123 43.1
RcHm_v2.0_Chr7g0242751 Rosa chinensis HOM05D005476 ORTHO05D006886 1.3e-14 85.1 87 50.6
SalBow5G5594 Salvia bowleyana HOM05D005476 ORTHO05D006886 1.6e-12 78.2 70 55.7
Pp3c11_9540 Physcomitrium patens HOM05D005476 ORTHO05D006886 2.7e-07 60.8 129 35.7


User provided reference genes

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