Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PZS5LY Arachis hypogaea HOM05D008537 ORTHO05D010652 6.7e-187 657.1 318 100.0
arahy.Tifrunner.gnm1.ann1.DJ3Y2L Arachis hypogaea HOM05D008537 ORTHO05D010652 1.9e-181 639.0 321 96.9
arahy.Tifrunner.gnm1.ann1.75TDV4 Arachis hypogaea HOM05D008537 ORTHO05D010652 6.0e-79 298.5 159 92.5
Actinidia34884 Actinidia chinensis HOM05D008537 ORTHO05D010652 6.5e-73 278.5 165 87.9
RcHm_v2.0_MTg0499151 Rosa chinensis HOM05D008537 ORTHO05D010652 2.2e-60 236.9 116 98.3
LjContig00439g0010598 Lotus japonicus HOM05D008537 ORTHO05D010652 1.4e-59 234.2 256 56.6
LjContig00446g0012519 Lotus japonicus HOM05D008537 ORTHO05D010652 1.4e-59 234.2 256 56.6
Solyc00g500112.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 5.3e-59 232.3 116 96.6
Ah.10g028020 Amaranthus hybridus HOM05D008537 ORTHO05D010652 1.2e-58 231.1 113 98.2
TPR.G35334 Trifolium pratense HOM05D008537 ORTHO05D010652 7.7e-58 228.4 109 100.0
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 1.4e-56 224.2 126 86.5
Gorai.001G167800 Gossypium raimondii HOM05D008537 ORTHO05D010652 4.2e-56 222.6 106 100.0
Ca_27707_v3 Cicer arietinum L. HOM05D008537 ORTHO05D010652 7.2e-56 221.9 110 96.4
SabraMtG0006100 Salix brachista HOM05D008537 ORTHO05D010652 1.6e-55 220.7 108 97.2
CsaV3_UNG209980 Cucumis sativus L. HOM05D008537 ORTHO05D010652 2.7e-55 219.9 108 97.2
Solyc00g500256.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 6.7e-54 215.3 108 96.3
CDE02G3137 Ceratophyllum demersum HOM05D008537 ORTHO05D010652 9.7e-53 211.5 214 61.7
Aa31csc464G100 Aethionema arabicum HOM05D008537 ORTHO05D010652 4.5e-50 202.6 106 92.5
Glyma.17G185800 Glycine max HOM05D008537 ORTHO05D010652 3.8e-49 199.5 254 52.8
SEGI_04170 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 3.0e-46 189.9 179 59.8
SEGI_18574 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 3.0e-46 189.9 179 59.8
CARHR287170 Cardamine hirsuta HOM05D008537 ORTHO05D010652 1.2e-45 188.0 93 98.9
Lalb_Chr00c51g0413211 Lupinus albus HOM05D008537 ORTHO05D010652 3.1e-43 179.9 130 73.8
SEGI_08781 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 2.9e-41 173.3 171 58.5
BolSC28t60361H Brassica oleracea HOM05D008537 ORTHO05D010652 1.3e-36 157.9 98 83.7
BraSC177t45759Z Brassica rapa HOM05D008537 ORTHO05D010652 1.3e-36 157.9 98 83.7
BraSC48t46348Z Brassica rapa HOM05D008537 ORTHO05D010652 1.3e-36 157.9 98 83.7
Solyc11g030915.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 4.1e-35 152.9 94 80.9
C01p34740 Brassica napus HOM05D008537 ORTHO05D010652 2.3e-30 137.1 98 73.5
EL10Ac5g12180 Beta vulgaris HOM05D008537 ORTHO05D010652 6.3e-28 129.0 116 61.2
Ca_01487_v3 Cicer arietinum L. HOM05D033364 ORTHO05D030825 4.3e-24 116.3 120 58.3
Mapoly3683s0001 Marchantia polymorpha HOM05D008537 ORTHO05D010652 7.5e-21 105.5 73 71.2
CAN.G261.12 Capsicum annuum HOM05D008537 ORTHO05D010652 2.9e-20 103.6 60 81.7
HanXRQChr00c0192g0572351 Helianthus annuus HOM05D004291 ORTHO05D005620 6.4e-20 102.4 59 83.1
Peaxi162Scf00622g00018 Petunia axillaris HOM05D008537 ORTHO05D010652 1.9e-16 90.9 97 56.7
ATR1126G003 Amborella trichopoda HOM05D008537 ORTHO05D010652 3.6e-15 86.7 47 91.5
Actinidia34874 Actinidia chinensis HOM05D033364 ORTHO05D030825 5.8e-13 79.3 40 95.0
CDE02G2997 Ceratophyllum demersum HOM05D008537 ORTHO05D010652 1.5e-08 64.7 41 82.9
ECA039G0033 Erigeron canadensis HOM05D008537 ORTHO05D019542 1.9e-08 64.3 41 82.9
SHI26665 Sapria himalayana HOM05D008537 ORTHO05D010652 2.5e-08 63.9 35 82.9
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 4.3e-08 63.2 91 35.2
Solyc10g045727.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 1.2e-07 61.6 80 48.8
Nitab4.5_0007293g0110 Nicotiana tabacum HOM05D008537 ORTHO05D010652 8.1e-07 58.9 43 72.1
Nn117s43416 Nelumbo nucifera HOM05D047131 ORTHO05D016420 4.0e-06 56.6 34 76.5
Nn1g10111 Nelumbo nucifera HOM05D047131 ORTHO05D016420 4.0e-06 56.6 34 76.5
SGA_v2.0_scaffold420G51364 Striga asiatica HOM05D008537 ORTHO05D010652 8.9e-06 55.5 33 78.8


User provided reference genes

Program Settings