Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PZHE2F Arachis hypogaea HOM05D001602 ORTHO05D001470 3.1e-44 181.4 91 100.0
arahy.Tifrunner.gnm1.ann1.945Z0P Arachis hypogaea HOM05D001602 ORTHO05D001470 5.0e-10 67.8 51 70.6
arahy.Tifrunner.gnm1.ann1.HEJ2LC Arachis hypogaea HOM05D001602 ORTHO05D001470 5.0e-10 67.8 51 70.6
Peaxi162Scf00845g00006 Petunia axillaris HOM05D001602 ORTHO05D001470 1.0e-07 60.1 55 52.7
Thhalv10003267m.g Eutrema salsugineum HOM05D001602 ORTHO05D001470 1.4e-07 59.7 51 58.8
Oeu022441.1 Olea europaea HOM05D001602 ORTHO05D001470 1.4e-07 59.7 55 52.7
Actinidia39331 Actinidia chinensis HOM05D001602 ORTHO05D001470 1.8e-07 59.3 81 42.0
Medtr2g090740 Medicago truncatula HOM05D001602 ORTHO05D001470 1.8e-07 59.3 51 58.8
Nitab4.5_0000621g0020 Nicotiana tabacum HOM05D001602 ORTHO05D001470 1.8e-07 59.3 55 52.7
Rhsim04G0071400 Rhododendron simsii HOM05D001602 ORTHO05D001470 1.8e-07 59.3 55 54.5
CiPaw.03G182300 Carya illinoinensis HOM05D001602 ORTHO05D001470 2.3e-07 58.9 51 56.9
Duzib052G0615 Durio zibethinus HOM05D001602 ORTHO05D001470 2.3e-07 58.9 51 58.8
Cfa014666 Carpinus fangiana HOM05D001602 ORTHO05D001470 3.0e-07 58.5 51 52.9
Lsat_1_v5_gn_8_136640 Lactuca sativa HOM05D001602 ORTHO05D001470 3.0e-07 58.5 81 40.7
Atru.chr6.2863 Acer truncatum HOM05D001602 ORTHO05D001470 3.9e-07 58.2 51 58.8
Aa31LG5G3070 Aethionema arabicum HOM05D001602 ORTHO05D001470 3.9e-07 58.2 51 54.9
Gohir.A03G154400 Gossypium hirsutum HOM05D001602 ORTHO05D001470 3.9e-07 58.2 51 56.9
Gohir.D02G177300 Gossypium hirsutum HOM05D001602 ORTHO05D001470 3.9e-07 58.2 51 56.9
Gorai.005G199000 Gossypium raimondii HOM05D001602 ORTHO05D001470 3.9e-07 58.2 51 56.9
TWI59G0871 Tripterygium wilfordii HOM05D001602 ORTHO05D001470 3.9e-07 58.2 51 56.9
CARHR179100 Cardamine hirsuta HOM05D001602 ORTHO05D001470 5.1e-07 57.8 51 56.9
COL.COLO4_37678 Corchorus olitorius HOM05D001602 ORTHO05D001470 5.1e-07 57.8 51 58.8
Lalb_Chr14g0367171 Lupinus albus HOM05D001602 ORTHO05D001470 5.1e-07 57.8 51 60.8
THA.LOC104801156 Tarenaya hassleriana HOM05D001602 ORTHO05D001470 5.1e-07 57.8 51 56.9
Haze_13255 Corylus avellana HOM05D001602 ORTHO05D001470 6.7e-07 57.4 51 52.9
DCAR_013041 Daucus carota HOM05D001602 ORTHO05D001470 6.7e-07 57.4 55 52.7
HanXRQChr17g0555031 Helianthus annuus HOM05D001602 ORTHO05D001470 6.7e-07 57.4 55 52.7
SpUn0826_0010 Schrenkiella parvula HOM05D001602 ORTHO05D001470 6.7e-07 57.4 51 54.9
BcaB07g30966 Brassica carinata HOM05D001602 ORTHO05D001470 8.8e-07 57.0 51 54.9
A09p20940 Brassica napus HOM05D001602 ORTHO05D001470 8.8e-07 57.0 51 54.9
BraA09t37694Z Brassica rapa HOM05D001602 ORTHO05D001470 8.8e-07 57.0 51 54.9
Glyma.13G293900 Glycine max HOM05D001602 ORTHO05D001470 8.8e-07 57.0 51 58.8
Hma1.2p1_0734F.1_g210350 Hydrangea macrophylla HOM05D001602 ORTHO05D001470 8.8e-07 57.0 55 52.7
Thecc.02G187300 Theobroma cacao HOM05D001602 ORTHO05D001470 8.8e-07 57.0 51 56.9
BcaC04g21860 Brassica carinata HOM05D001602 ORTHO05D001470 1.1e-06 56.6 51 54.9
C09p26540 Brassica napus HOM05D001602 ORTHO05D001470 1.1e-06 56.6 51 54.9
BolC9t55550H Brassica oleracea HOM05D001602 ORTHO05D001470 1.1e-06 56.6 51 54.9
CANSAT64G1522 Cannabis sativa HOM05D001602 ORTHO05D001470 1.1e-06 56.6 77 42.9
Dinv06852 Davidia involucrata HOM05D001602 ORTHO05D001470 1.1e-06 56.6 55 52.7
Manes.12G086100 Manihot esculenta HOM05D001602 ORTHO05D001470 1.5e-06 56.2 51 56.9
Phvul.005G100000 Phaseolus vulgaris HOM05D001602 ORTHO05D001470 1.5e-06 56.2 51 56.9
Ca_17938_v3 Cicer arietinum L. HOM05D001602 ORTHO05D001470 2.0e-06 55.8 51 54.9
Solyc07g053580.3 Solanum lycopersicum HOM05D001602 ORTHO05D001470 2.0e-06 55.8 55 49.1
Sopen07g027530 Solanum pennellii HOM05D001602 ORTHO05D001470 2.0e-06 55.8 55 49.1
PGSC0003DMG400009398 Solanum tuberosum HOM05D001602 ORTHO05D001470 2.0e-06 55.8 55 49.1
unitig_46.g18246 Utricularia gibba HOM05D001602 ORTHO05D001470 2.0e-06 55.8 55 49.1
CSS0029917 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 2.6e-06 55.5 51 51.0
CSS0047535 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 2.6e-06 55.5 51 51.0
Cpa.g.sc83.104 Carica papaya HOM05D001602 ORTHO05D001470 2.6e-06 55.5 51 52.9
ECA233G1090 Erigeron canadensis HOM05D000028 ORTHO05D000296 2.6e-06 55.5 77 39.0
Psat5g273960 Pisum sativum HOM05D001602 ORTHO05D001470 2.6e-06 55.5 51 54.9
Potri.017G017000 Populus trichocarpa HOM05D001602 ORTHO05D001470 2.6e-06 55.5 51 54.9
arahy.Tifrunner.gnm1.ann1.VMR70Y Arachis hypogaea HOM05D001602 ORTHO05D001470 3.3e-06 55.1 54 61.1
FvH4_6g26750 Fragaria vesca HOM05D001602 ORTHO05D001470 3.3e-06 55.1 51 52.9
FAN05G5437 Fragaria x ananassa HOM05D001602 ORTHO05D001470 3.3e-06 55.1 51 52.9
FAN14G4128 Fragaria x ananassa HOM05D001602 ORTHO05D001470 3.3e-06 55.1 51 52.9
PGR042G1519 Punica granatum HOM05D001602 ORTHO05D001470 3.3e-06 55.1 51 56.9
RcHm_v2.0_Chr0c19g0500101 Rosa chinensis HOM05D001602 ORTHO05D001470 3.3e-06 55.1 51 52.9
Sabra17G0013200 Salix brachista HOM05D001602 ORTHO05D001470 3.3e-06 55.1 51 54.9
VMungo1080G1085 Vigna mungo HOM05D001602 ORTHO05D001470 3.3e-06 55.1 54 53.7
arahy.Tifrunner.gnm1.ann1.CR36LG Arachis hypogaea HOM05D001602 ORTHO05D001470 4.4e-06 54.7 48 62.5
Ciclev10016518m.g Citrus clementina HOM05D001602 ORTHO05D001470 4.4e-06 54.7 51 54.9
AL8G15850 Arabidopsis lyrata HOM05D001602 ORTHO05D001470 5.7e-06 54.3 51 52.9
AT5G44170 Arabidopsis thaliana HOM05D001602 ORTHO05D001470 5.7e-06 54.3 51 52.9
Nn1g04250 Nelumbo nucifera HOM05D001602 ORTHO05D001470 5.7e-06 54.3 55 50.9
Nitab4.5_0005191g0010 Nicotiana tabacum HOM05D001602 ORTHO05D001470 5.7e-06 54.3 55 47.3
Lj3g0009490 Lotus japonicus HOM05D001602 ORTHO05D001470 7.4e-06 53.9 51 54.9
PSO675G8974 Papaver somniferum HOM05D001602 ORTHO05D001470 9.7e-06 53.5 51 54.9
SGA_v2.0_scaffold70G23483 Striga asiatica HOM05D001602 ORTHO05D001470 9.7e-06 53.5 55 47.3


User provided reference genes

Program Settings