Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PY7VTL Arachis hypogaea HOM05D000205 ORTHO05D086068 1.1e-30 136.0 67 100.0
arahy.Tifrunner.gnm1.ann1.AII7S7 Arachis hypogaea HOM05D000205 ORTHO05D026934 5.6e-11 70.5 45 82.2
Glyma.13G026901 Glycine max HOM05D000205 ORTHO05D001133 3.7e-10 67.8 37 86.5
Phvul.L003237 Phaseolus vulgaris HOM05D000205 ORTHO05D001133 3.7e-10 67.8 37 86.5
Lj6g0025479 Lotus japonicus HOM05D000205 ORTHO05D001133 1.8e-09 65.5 37 86.5
Oeu020491.1 Olea europaea HOM05D000205 ORTHO05D001133 3.1e-09 64.7 37 83.8
Gohir.D07G175400 Gossypium hirsutum HOM05D000205 ORTHO05D001133 4.0e-09 64.3 37 83.8
Gorai.001G196300 Gossypium raimondii HOM05D000205 ORTHO05D001133 4.0e-09 64.3 37 83.8
Medtr3g080240 Medicago truncatula HOM05D000205 ORTHO05D001133 4.0e-09 64.3 37 83.8
Ca_16280_v3 Cicer arietinum L. HOM05D000205 ORTHO05D001133 6.9e-09 63.5 37 83.8
Hma1.2p1_2381F.1_g320990 Hydrangea macrophylla HOM05D000205 ORTHO05D001133 6.9e-09 63.5 37 83.8
Actinidia10803 Actinidia chinensis HOM05D000205 ORTHO05D001133 9.0e-09 63.2 37 81.1
Cc05_g03100 Coffea canephora HOM05D000205 ORTHO05D001133 9.0e-09 63.2 37 81.1
CARHR004460 Cardamine hirsuta HOM05D000205 ORTHO05D026934 1.2e-08 62.8 38 78.9
Dinv08727 Davidia involucrata HOM05D000205 ORTHO05D001133 1.2e-08 62.8 37 81.1
Migut.N03095 Erythranthe guttata HOM05D000205 ORTHO05D001133 1.2e-08 62.8 37 81.1
Hma1.2p1_0445F.1_g154430 Hydrangea macrophylla HOM05D000205 ORTHO05D001133 1.2e-08 62.8 37 83.8
Sabra14G0044600 Salix brachista HOM05D000205 ORTHO05D001133 1.2e-08 62.8 37 83.8
GSVIVG01030495001 Vitis vinifera HOM05D000205 ORTHO05D001133 1.2e-08 62.8 37 83.8
AUR62021322 Chenopodium quinoa HOM05D000205 ORTHO05D001133 1.5e-08 62.4 37 78.4
Ciclev10014865m.g Citrus clementina HOM05D000205 ORTHO05D001133 1.5e-08 62.4 37 81.1
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 1.5e-08 62.4 37 81.1
PSO541G6399 Papaver somniferum HOM05D000205 ORTHO05D001133 1.5e-08 62.4 37 81.1
Potri.014G060800 Populus trichocarpa HOM05D000205 ORTHO05D001133 1.5e-08 62.4 37 81.1
SalBow6G5328 Salvia bowleyana HOM05D000205 ORTHO05D001133 1.5e-08 62.4 37 81.1
Thecc.01G181200 Theobroma cacao HOM05D000205 ORTHO05D001133 1.5e-08 62.4 37 81.1
unitig_578.g16255 Utricularia gibba HOM05D000205 ORTHO05D001133 1.5e-08 62.4 37 81.1
AL1G14780 Arabidopsis lyrata HOM05D000205 ORTHO05D001133 2.0e-08 62.0 37 81.1
AT1G05030 Arabidopsis thaliana HOM05D000205 ORTHO05D001133 2.0e-08 62.0 37 81.1
Duzib138G0214 Durio zibethinus HOM05D000205 ORTHO05D001133 2.0e-08 62.0 37 81.1
Gohir.A07G169000 Gossypium hirsutum HOM05D000205 ORTHO05D001133 2.0e-08 62.0 37 81.1
Lj8C129G6 Lonicera japonica HOM05D000205 ORTHO05D001133 2.0e-08 62.0 37 81.1
Nn1g07284 Nelumbo nucifera HOM05D000205 ORTHO05D001133 2.0e-08 62.0 37 78.4
vmacro09356 Vaccinium macrocarpon HOM05D000205 ORTHO05D001133 2.0e-08 62.0 37 78.4
CiPaw.03G156200 Carya illinoinensis HOM05D000205 ORTHO05D001133 2.6e-08 61.6 37 78.4
AUR62033239 Chenopodium quinoa HOM05D000205 ORTHO05D001133 2.6e-08 61.6 36 83.3
QL08p030949 Quercus lobata HOM05D000205 ORTHO05D001133 2.6e-08 61.6 37 78.4
Rhsim04G0051100 Rhododendron simsii HOM05D000205 ORTHO05D001133 2.6e-08 61.6 37 78.4
THA.LOC104826138 Tarenaya hassleriana HOM05D000205 ORTHO05D001133 2.6e-08 61.6 37 81.1
TWI75G0680 Tripterygium wilfordii HOM05D000205 ORTHO05D001133 2.6e-08 61.6 37 78.4
CANSAT64G2941 Cannabis sativa HOM05D000205 ORTHO05D001133 3.4e-08 61.2 37 81.1
FvH4_6g42430 Fragaria vesca HOM05D000205 ORTHO05D001133 3.4e-08 61.2 37 78.4
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 3.4e-08 61.2 37 78.4
Psat5g106920 Pisum sativum HOM05D000205 ORTHO05D001133 3.4e-08 61.2 37 81.1
RcHm_v2.0_Chr2g0158321 Rosa chinensis HOM05D000205 ORTHO05D001133 3.4e-08 61.2 37 78.4
TPR.G34499 Trifolium pratense HOM05D000205 ORTHO05D001133 3.4e-08 61.2 37 81.1
CDE11G1046 Ceratophyllum demersum HOM05D000205 ORTHO05D001133 4.5e-08 60.8 37 78.4
ClCG02G018030 Citrullus lanatus HOM05D000205 ORTHO05D001133 4.5e-08 60.8 37 78.4
Haze_12774 Corylus avellana HOM05D000205 ORTHO05D001133 4.5e-08 60.8 37 78.4
FAN05G2396 Fragaria x ananassa HOM05D000205 ORTHO05D001133 4.5e-08 60.8 37 78.4
FAN09G0564 Fragaria x ananassa HOM05D000205 ORTHO05D001133 4.5e-08 60.8 37 78.4
EL10Ac8g18307 Beta vulgaris HOM05D000205 ORTHO05D001133 5.8e-08 60.5 37 75.7
MELO3C019742.2 Cucumis melo HOM05D000205 ORTHO05D001133 5.8e-08 60.5 44 65.9
Manes.13G066800 Manihot esculenta HOM05D000205 ORTHO05D001133 5.8e-08 60.5 36 77.8
Prupe.3G211400 Prunus persica HOM05D000205 ORTHO05D001133 5.8e-08 60.5 37 75.7
Ah.09g230040 Amaranthus hybridus HOM05D000205 ORTHO05D001133 7.6e-08 60.1 37 75.7
Cpa.g.sc132.14 Carica papaya HOM05D000205 ORTHO05D001133 7.6e-08 60.1 37 75.7
Nitab4.5_0000482g0230 Nicotiana tabacum HOM05D000205 ORTHO05D001133 7.6e-08 60.1 37 75.7
Nitab4.5_0003310g0060 Nicotiana tabacum HOM05D000205 ORTHO05D001133 7.6e-08 60.1 37 75.7
Cfa014322 Carpinus fangiana HOM05D000205 ORTHO05D001133 1.0e-07 59.7 37 75.7
Eucgr.K00761 Eucalyptus grandis HOM05D000205 ORTHO05D001133 1.0e-07 59.7 37 78.4
Sed0003798 Sechium edule HOM05D000205 ORTHO05D001133 1.0e-07 59.7 37 78.4
Sc18g0003920 Simmondsia chinensis HOM05D000205 ORTHO05D001133 1.0e-07 59.7 37 73.0
MBI19_g41386_MAGBIO Magnolia biondii HOM05D000205 ORTHO05D001133 1.3e-07 59.3 37 75.7
HPP92_001346 Vanilla planifolia HOM05D000205 ORTHO05D001133 1.3e-07 59.3 37 78.4
MD17G1103300 Malus domestica HOM05D000205 ORTHO05D001133 2.9e-07 58.2 37 75.7
TAR627G0176 Trochodendron aralioides HOM05D000205 ORTHO05D001133 2.9e-07 58.2 37 73.0
Atru.chr6.3247 Acer truncatum HOM05D000205 ORTHO05D001133 3.8e-07 57.8 34 79.4
ATR0059G018 Amborella trichopoda HOM05D000205 ORTHO05D001133 6.5e-07 57.0 37 73.0
Hund09043 Selenicereus undatus HOM05D000205 ORTHO05D001133 6.5e-07 57.0 37 73.0
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 8.4e-07 56.6 37 73.0
Aqoxy1G02943 Aquilegia oxysepala HOM05D000205 ORTHO05D001133 1.1e-06 56.2 37 75.7
CsaV3_6G015250 Cucumis sativus L. HOM05D000205 ORTHO05D001133 1.1e-06 56.2 37 73.0
Lsat_1_v5_gn_5_123860 Lactuca sativa HOM05D000205 ORTHO05D001133 1.1e-06 56.2 37 70.3
Peaxi162Scf00921g00250 Petunia axillaris HOM05D000205 ORTHO05D001133 1.4e-06 55.8 37 73.0
Solyc07g049310.3 Solanum lycopersicum HOM05D000205 ORTHO05D001133 1.4e-06 55.8 37 67.6
Sopen07g024640 Solanum pennellii HOM05D000205 ORTHO05D001133 1.4e-06 55.8 37 67.6
BcaC05g24410 Brassica carinata HOM05D040241 ORTHO05D039591 3.2e-06 54.7 35 77.1
Os09g0394500 Oryza sativa ssp. japonica HOM05D000205 ORTHO05D001133 4.2e-06 54.3 37 64.9
HanXRQChr12g0373621 Helianthus annuus HOM05D000205 ORTHO05D001133 7.1e-06 53.5 37 67.6


User provided reference genes

Program Settings