Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 8.1e-45 183.3 91 100.0
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 3.1e-28 128.3 88 75.0
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 3.8e-26 121.3 77 77.9
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 1.9e-25 119.0 67 85.1
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 7.1e-25 117.1 67 83.6
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 2.1e-24 115.5 72 76.4
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 2.3e-23 112.1 65 80.0
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 1.1e-22 109.8 68 75.0
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 1.1e-17 93.2 67 70.1
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 7.2e-17 90.5 67 70.1
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 3.6e-16 88.2 65 63.1
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 3.6e-16 88.2 65 63.1
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 4.6e-16 87.8 65 69.2
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 6.1e-16 87.4 65 64.6
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 6.1e-16 87.4 65 67.7
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 6.1e-16 87.4 67 68.7
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 7.9e-16 87.0 53 77.4
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 7.9e-16 87.0 65 61.5
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 7.9e-16 87.0 65 61.5
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 7.9e-16 87.0 65 61.5
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 1.0e-15 86.7 65 63.1
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 1.0e-15 86.7 65 63.1
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 1.8e-15 85.9 65 60.0
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 1.8e-15 85.9 67 67.2
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 1.8e-15 85.9 65 66.2
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 1.8e-15 85.9 65 64.6
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 1.8e-15 85.9 65 61.5
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 3.0e-15 85.1 65 66.2
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 3.9e-15 84.7 65 66.2
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 3.9e-15 84.7 65 61.5
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 3.9e-15 84.7 65 66.2
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 3.9e-15 84.7 65 63.1
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 3.9e-15 84.7 65 67.7
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 3.9e-15 84.7 65 67.7
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 3.9e-15 84.7 65 67.7
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 5.1e-15 84.3 65 66.2
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 5.1e-15 84.3 65 66.2
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 5.1e-15 84.3 65 64.6
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 5.1e-15 84.3 65 66.2
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 5.1e-15 84.3 65 64.6
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 6.7e-15 84.0 65 64.6
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 6.7e-15 84.0 67 62.7
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 8.8e-15 83.6 65 64.6
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 8.8e-15 83.6 65 61.5
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 1.1e-14 83.2 65 61.5
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 1.1e-14 83.2 65 64.6
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 1.1e-14 83.2 65 64.6
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 1.1e-14 83.2 65 58.5
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 1.5e-14 82.8 65 61.5
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 1.5e-14 82.8 65 64.6
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 1.9e-14 82.4 65 63.1
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 1.9e-14 82.4 65 56.9
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 1.9e-14 82.4 65 66.2
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 2.5e-14 82.0 65 60.0
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 2.5e-14 82.0 65 61.5
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 3.3e-14 81.6 65 61.5
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 3.3e-14 81.6 65 61.5
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 4.3e-14 81.3 65 61.5
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 4.3e-14 81.3 65 61.5
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 5.7e-14 80.9 65 61.5
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 5.7e-14 80.9 65 61.5
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 7.4e-14 80.5 65 63.1
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 7.4e-14 80.5 65 58.5
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 7.4e-14 80.5 65 61.5
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 9.7e-14 80.1 65 61.5
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 9.7e-14 80.1 67 61.2
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 9.7e-14 80.1 65 58.5
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 1.3e-13 79.7 65 61.5
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 1.7e-13 79.3 65 58.5
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 1.7e-13 79.3 65 61.5
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 1.7e-13 79.3 67 62.7
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 1.7e-13 79.3 67 64.2
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 2.2e-13 79.0 65 58.5
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 2.2e-13 79.0 65 60.0
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 2.2e-13 79.0 65 58.5
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 2.2e-13 79.0 65 58.5
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 2.2e-13 79.0 65 60.0
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 2.2e-13 79.0 65 60.0
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 2.8e-13 78.6 65 56.9
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 2.8e-13 78.6 65 56.9
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 2.8e-13 78.6 65 56.9
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 2.8e-13 78.6 65 64.6
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 2.8e-13 78.6 65 64.6
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 2.8e-13 78.6 65 58.5
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 3.7e-13 78.2 65 60.0
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 3.7e-13 78.2 67 62.7
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 4.8e-13 77.8 65 64.6
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 4.8e-13 77.8 65 56.9
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 4.8e-13 77.8 65 60.0
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 6.3e-13 77.4 65 60.0
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 6.3e-13 77.4 65 60.0
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 1.1e-12 76.6 65 55.4
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 1.1e-12 76.6 65 56.9
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 1.1e-12 76.6 67 62.7
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 1.4e-12 76.3 59 59.3
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 1.8e-12 75.9 65 58.5
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 5.3e-12 74.3 65 55.4
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 1.2e-11 73.2 65 60.0
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 1.2e-11 73.2 65 60.0
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 1.5e-11 72.8 65 60.0
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 1.5e-11 72.8 65 58.5
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 1.5e-11 72.8 65 58.5
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 2.6e-11 72.0 55 65.5
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 4.5e-11 71.2 66 57.6
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 1.0e-10 70.1 53 69.8
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 2.2e-10 68.9 68 57.4
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 5.0e-10 67.8 53 64.2
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-09 65.9 76 51.3
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 2.5e-09 65.5 65 58.5
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 3.2e-09 65.1 67 53.7
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 4.2e-09 64.7 65 55.4
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 5.5e-09 64.3 65 46.2
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 7.2e-09 63.9 55 54.5
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 1.6e-08 62.8 65 53.8
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 2.7e-08 62.0 59 57.6
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 5.1e-07 57.8 66 47.0


User provided reference genes

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