Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PXW40T Arachis hypogaea HOM05D005765 ORTHO05D002313 2.8e-45 184.9 90 100.0
arahy.Tifrunner.gnm1.ann1.4M6ER6 Arachis hypogaea HOM05D000759 ORTHO05D000574 2.8e-29 131.7 73 90.4
arahy.Tifrunner.gnm1.ann1.6IU2DD Arachis hypogaea HOM05D000501 ORTHO05D000376 2.9e-26 121.7 71 85.9
arahy.Tifrunner.gnm1.ann1.KHI48J Arachis hypogaea HOM05D000501 ORTHO05D000376 3.3e-22 108.2 59 91.5
arahy.Tifrunner.gnm1.ann1.JYGZ5B Arachis hypogaea HOM05D005765 ORTHO05D002313 1.4e-20 102.8 72 77.8
arahy.Tifrunner.gnm1.ann1.UE98G4 Arachis hypogaea HOM05D001334 ORTHO05D001119 1.4e-20 102.8 60 83.3
arahy.Tifrunner.gnm1.ann1.ZMYY1J Arachis hypogaea HOM05D005765 ORTHO05D002313 1.4e-20 102.8 72 77.8
arahy.Tifrunner.gnm1.ann1.9892BY Arachis hypogaea HOM05D005765 ORTHO05D002313 6.8e-20 100.5 71 77.5
arahy.Tifrunner.gnm1.ann1.C2TYHM Arachis hypogaea HOM05D005765 ORTHO05D002313 6.8e-20 100.5 71 77.5
arahy.Tifrunner.gnm1.ann1.R96Y40 Arachis hypogaea HOM05D005765 ORTHO05D002313 3.4e-19 98.2 59 83.1
arahy.Tifrunner.gnm1.ann1.FH304Y Arachis hypogaea HOM05D005765 ORTHO05D002313 1.7e-18 95.9 55 87.3
Glyma.04G139200 Glycine max HOM05D005765 ORTHO05D002313 2.2e-18 95.5 72 70.8
Glyma.11G151300 Glycine max HOM05D005765 ORTHO05D002313 2.2e-18 95.5 72 70.8
arahy.Tifrunner.gnm1.ann1.HIDG7R Arachis hypogaea HOM05D005765 ORTHO05D002313 3.8e-18 94.7 81 69.1
VMungo1080G1067 Vigna mungo HOM05D005765 ORTHO05D002313 4.9e-18 94.4 72 69.4
Lalb_Chr18g0046701 Lupinus albus HOM05D005765 ORTHO05D002313 6.4e-18 94.0 70 72.9
THA.LOC104825626 Tarenaya hassleriana HOM05D005765 ORTHO05D002313 1.1e-17 93.2 72 69.4
arahy.Tifrunner.gnm1.ann1.BY24CF Arachis hypogaea HOM05D001334 ORTHO05D001119 1.4e-17 92.8 68 73.5
ClCG11G007120 Citrullus lanatus HOM05D005765 ORTHO05D002313 1.9e-17 92.4 72 68.1
CsaV3_2G034130 Cucumis sativus L. HOM05D005765 ORTHO05D002313 1.9e-17 92.4 72 68.1
Sed0006067 Sechium edule HOM05D005765 ORTHO05D002313 1.9e-17 92.4 72 68.1
Phvul.005G031700 Phaseolus vulgaris HOM05D005765 ORTHO05D002313 2.4e-17 92.0 70 70.0
Thecc.04G037800 Theobroma cacao HOM05D005765 ORTHO05D002313 3.2e-17 91.7 72 69.4
Eucgr.I01643 Eucalyptus grandis HOM05D005765 ORTHO05D002313 1.6e-16 89.4 72 66.7
Gohir.D09G037100 Gossypium hirsutum HOM05D005765 ORTHO05D002313 1.6e-16 89.4 72 66.7
Gorai.006G042400 Gossypium raimondii HOM05D005765 ORTHO05D002313 1.6e-16 89.4 72 66.7
Lalb_Chr04g0259971 Lupinus albus HOM05D005765 ORTHO05D002313 1.6e-16 89.4 63 74.6
PGR142G2888 Punica granatum HOM05D005765 ORTHO05D002313 1.6e-16 89.4 72 65.3
Cfa007223 Carpinus fangiana HOM05D005765 ORTHO05D002313 2.1e-16 89.0 72 66.7
Lj3g0012175 Lotus japonicus HOM05D005765 ORTHO05D002313 2.1e-16 89.0 70 68.6
Duzib187G1674 Durio zibethinus HOM05D005765 ORTHO05D002313 2.7e-16 88.6 72 65.3
Manes.15G161500 Manihot esculenta HOM05D005765 ORTHO05D002313 2.7e-16 88.6 72 63.9
Sed0017038 Sechium edule HOM05D005765 ORTHO05D002313 2.7e-16 88.6 72 65.3
CiPaw.04G036800 Carya illinoinensis HOM05D005765 ORTHO05D002313 3.5e-16 88.2 72 66.7
Ciclev10016825m.g Citrus clementina HOM05D005765 ORTHO05D002313 3.5e-16 88.2 70 67.1
Hund04356 Selenicereus undatus HOM05D005765 ORTHO05D002313 3.5e-16 88.2 78 64.1
SGA_v2.0_scaffold44G16916 Striga asiatica HOM05D005765 ORTHO05D002313 3.5e-16 88.2 72 66.7
TWI34G0325 Tripterygium wilfordii HOM05D005765 ORTHO05D002313 6.0e-16 87.4 72 65.3
TAR374G0284 Trochodendron aralioides HOM05D005765 ORTHO05D002313 6.0e-16 87.4 72 66.7
Haze_14881 Corylus avellana HOM05D005765 ORTHO05D002313 7.8e-16 87.0 71 66.2
MBI11_g24616_MAGBIO Magnolia biondii HOM05D005765 ORTHO05D002313 7.8e-16 87.0 72 65.3
AUR62003522 Chenopodium quinoa HOM05D005765 ORTHO05D002313 1.0e-15 86.7 72 65.3
CSS0026879 Camellia sinensis var. sinensis HOM05D005765 ORTHO05D002313 1.3e-15 86.3 72 65.3
MD17G1000400 Malus domestica HOM05D005765 ORTHO05D002313 1.3e-15 86.3 72 63.9
Prupe.3G306900 Prunus persica HOM05D005765 ORTHO05D002313 1.3e-15 86.3 72 63.9
CANSAT64G0001 Cannabis sativa HOM05D005765 ORTHO05D002313 1.7e-15 85.9 72 65.3
Gohir.A09G036100 Gossypium hirsutum HOM05D005765 ORTHO05D002313 1.7e-15 85.9 72 63.9
Peaxi162Scf00700g00029 Petunia axillaris HOM05D005765 ORTHO05D002313 1.7e-15 85.9 72 65.3
Potri.001G329500 Populus trichocarpa HOM05D005765 ORTHO05D002313 1.7e-15 85.9 72 62.5
RcHm_v2.0_Chr2g0175661 Rosa chinensis HOM05D005765 ORTHO05D002313 1.7e-15 85.9 72 62.5
AUR62017836 Chenopodium quinoa HOM05D005765 ORTHO05D002313 2.3e-15 85.5 72 63.9
Nn3g16448 Nelumbo nucifera HOM05D005765 ORTHO05D002313 2.3e-15 85.5 72 63.9
Nitab4.5_0000559g0370 Nicotiana tabacum HOM05D005765 ORTHO05D002313 2.3e-15 85.5 72 65.3
Nitab4.5_0005161g0040 Nicotiana tabacum HOM05D005765 ORTHO05D002313 2.3e-15 85.5 72 65.3
Solyc11g068820.3 Solanum lycopersicum HOM05D005765 ORTHO05D002313 2.3e-15 85.5 72 65.3
Sopen11g027540 Solanum pennellii HOM05D005765 ORTHO05D002313 2.3e-15 85.5 72 65.3
PGSC0003DMG400019631 Solanum tuberosum HOM05D005765 ORTHO05D002313 2.3e-15 85.5 72 65.3
TWI34G1681 Tripterygium wilfordii HOM05D005765 ORTHO05D002313 2.3e-15 85.5 69 66.7
Dinv25656 Davidia involucrata HOM05D005765 ORTHO05D002313 3.0e-15 85.1 72 65.3
FAN14G1527 Fragaria x ananassa HOM05D005765 ORTHO05D002313 3.0e-15 85.1 72 61.1
Ah.03g147540 Amaranthus hybridus HOM05D005765 ORTHO05D002313 3.9e-15 84.7 72 62.5
CAN.G792.8 Capsicum annuum HOM05D005765 ORTHO05D002313 3.9e-15 84.7 72 63.9
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 5.1e-15 84.3 72 63.9
Atru.chr6.2579 Acer truncatum HOM05D005765 ORTHO05D002313 6.6e-15 84.0 72 61.1
CDE05G1062 Ceratophyllum demersum HOM05D005765 ORTHO05D002313 6.6e-15 84.0 72 62.5
CDE05G3217 Ceratophyllum demersum HOM05D005765 ORTHO05D002313 6.6e-15 84.0 72 62.5
FvH4_6g53590 Fragaria vesca HOM05D005765 ORTHO05D002313 8.7e-15 83.6 70 62.9
MD09G1010200 Malus domestica HOM05D005765 ORTHO05D002313 8.7e-15 83.6 72 62.5
Sabra16G0210900 Salix brachista HOM05D005765 ORTHO05D002313 8.7e-15 83.6 72 59.7
Aqoxy3G01560 Aquilegia oxysepala HOM05D005765 ORTHO05D002313 1.1e-14 83.2 72 62.5
ATR0561G222 Amborella trichopoda HOM05D005765 ORTHO05D002313 1.5e-14 82.8 72 62.5
AL7G48600 Arabidopsis lyrata HOM05D005765 ORTHO05D002313 1.5e-14 82.8 69 63.8
AT5G40950 Arabidopsis thaliana HOM05D005765 ORTHO05D002313 1.5e-14 82.8 69 63.8
BcaB06g27577 Brassica carinata HOM05D005765 ORTHO05D002313 1.5e-14 82.8 69 65.2
BcaC02g08988 Brassica carinata HOM05D005765 ORTHO05D002313 1.5e-14 82.8 69 65.2
C04p48040 Brassica napus HOM05D005765 ORTHO05D002313 1.5e-14 82.8 69 65.2
BolC4t26396H Brassica oleracea HOM05D005765 ORTHO05D002313 1.5e-14 82.8 69 65.2
CARHR213430 Cardamine hirsuta HOM05D005765 ORTHO05D002313 1.5e-14 82.8 69 63.8
A04p14010 Brassica napus HOM05D005765 ORTHO05D002313 1.9e-14 82.4 69 63.8
BraA04t17063Z Brassica rapa HOM05D005765 ORTHO05D002313 1.9e-14 82.4 69 63.8
QL02p071244 Quercus lobata HOM05D005765 ORTHO05D002313 1.9e-14 82.4 70 62.9
SalBow4G0293 Salvia bowleyana HOM05D005765 ORTHO05D002313 1.9e-14 82.4 69 65.2
SalBow4G2955 Salvia bowleyana HOM05D005765 ORTHO05D002313 1.9e-14 82.4 69 65.2
Ca_14305_v3 Cicer arietinum L. HOM05D005765 ORTHO05D002313 2.5e-14 82.0 70 62.9
FAN02G1386 Fragaria x ananassa HOM05D005765 ORTHO05D002313 2.5e-14 82.0 70 61.4
FAN05G2595 Fragaria x ananassa HOM05D005765 ORTHO05D002313 2.5e-14 82.0 70 61.4
FAN09G1054 Fragaria x ananassa HOM05D005765 ORTHO05D002313 2.5e-14 82.0 70 61.4
Oeu005105.1 Olea europaea HOM05D005765 ORTHO05D002313 2.5e-14 82.0 72 61.1
Aa31LG9G720 Aethionema arabicum HOM05D005765 ORTHO05D002313 3.3e-14 81.6 72 62.5
Thhalv10027943m.g Eutrema salsugineum HOM05D005765 ORTHO05D002313 3.3e-14 81.6 69 62.3
Sp7g00970 Schrenkiella parvula HOM05D005765 ORTHO05D002313 3.3e-14 81.6 69 62.3
EL10Ac5g10709 Beta vulgaris HOM05D005765 ORTHO05D002313 4.3e-14 81.3 80 55.0
HPP92_025265 Vanilla planifolia HOM05D005765 ORTHO05D002313 5.6e-14 80.9 72 61.1
DCAR_015103 Daucus carota HOM05D005765 ORTHO05D002313 9.6e-14 80.1 70 64.3
ECA238G0681 Erigeron canadensis HOM05D005765 ORTHO05D002313 9.6e-14 80.1 70 62.9
Lsat_1_v5_gn_2_93120 Lactuca sativa HOM05D005765 ORTHO05D002313 9.6e-14 80.1 70 62.9
Psat5g215240 Pisum sativum HOM05D005765 ORTHO05D002313 9.6e-14 80.1 70 62.9
GSVIVG01033086001 Vitis vinifera HOM05D005765 ORTHO05D002313 9.6e-14 80.1 72 61.1
Carub.0007s3455 Capsella rubella HOM05D005765 ORTHO05D002313 1.6e-13 79.3 64 64.1
Migut.F00059 Erythranthe guttata HOM05D005765 ORTHO05D002313 1.6e-13 79.3 72 59.7
Cc07_g00870 Coffea canephora HOM05D005765 ORTHO05D002313 2.1e-13 79.0 70 60.0
HanXRQChr14g0450801 Helianthus annuus HOM05D005765 ORTHO05D002313 2.1e-13 79.0 70 61.4
HPP92_025270 Vanilla planifolia HOM05D005765 ORTHO05D002313 2.1e-13 79.0 71 60.6
Hma1.2p1_1057F.1_g252820 Hydrangea macrophylla HOM05D005765 ORTHO05D002313 2.8e-13 78.6 71 62.0
CDE05G0355 Ceratophyllum demersum HOM05D005765 ORTHO05D002313 1.1e-12 76.6 67 62.7
Lj7C610T3 Lonicera japonica HOM05D005765 ORTHO05D002313 1.1e-12 76.6 72 58.3
Rhsim08G0042600 Rhododendron simsii HOM05D005765 ORTHO05D002313 4.0e-12 74.7 71 59.2
PSO017G0717 Papaver somniferum HOM05D005765 ORTHO05D002313 5.3e-12 74.3 72 58.3
PSO478G4423 Papaver somniferum HOM05D005765 ORTHO05D002313 5.3e-12 74.3 72 58.3
unitig_0.g1924 Utricularia gibba HOM05D005765 ORTHO05D002313 5.3e-12 74.3 72 56.9
vmacro18349 Vaccinium macrocarpon HOM05D005765 ORTHO05D002313 6.9e-12 73.9 64 62.5
SEGI_37399 Sequoiadendron giganteum HOM05D005765 ORTHO05D002313 9.0e-12 73.6 70 57.1
Medtr3g020680 Medicago truncatula HOM05D005765 ORTHO05D002313 4.4e-11 71.2 68 57.4
arahy.Tifrunner.gnm1.ann1.QYC5CC Arachis hypogaea HOM05D000501 ORTHO05D000376 5.8e-11 70.9 38 92.1
Pp3c21_16170 Physcomitrium patens HOM05D005765 ORTHO05D002313 9.9e-11 70.1 72 54.2
Pp3c18_9840 Physcomitrium patens HOM05D005765 ORTHO05D002313 3.8e-10 68.2 68 55.9
SMO334G0113 Selaginella moellendorffii HOM05D005765 ORTHO05D002313 1.9e-09 65.9 70 54.3
Cpa.g.sc171.10 Carica papaya HOM05D005765 ORTHO05D002313 3.2e-09 65.1 37 83.8
Mapoly0027s0011 Marchantia polymorpha HOM05D005765 ORTHO05D002313 1.2e-08 63.2 69 55.1
Actinidia30872 Actinidia chinensis HOM05D005765 ORTHO05D002313 6.0e-08 60.8 37 81.1
MD00G1153700 Malus domestica HOM05D005765 ORTHO05D002313 5.1e-07 57.8 37 73.0
CBR_g59428 Chara braunii HOM05D005765 ORTHO05D002313 1.5e-06 56.2 78 51.3
AagrBONN_evm.TU.Sc2ySwM_362.2457 Anthoceros agrestis HOM05D005765 ORTHO05D002313 2.5e-06 55.5 70 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1099 Anthoceros agrestis HOM05D005765 ORTHO05D002313 2.5e-06 55.5 70 50.0


User provided reference genes

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