Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PVL51W Arachis hypogaea HOM05D008031 ORTHO05D010063 3.6e-91 338.2 167 100.0
arahy.Tifrunner.gnm1.ann1.CKB8X1 Arachis hypogaea HOM05D008031 ORTHO05D010063 2.9e-88 328.6 170 97.1
arahy.Tifrunner.gnm1.ann1.8JA41T Arachis hypogaea HOM05D008031 ORTHO05D010063 4.6e-86 321.2 170 95.3
Lj3g0013752 Lotus japonicus HOM05D008031 ORTHO05D010063 5.3e-34 148.3 172 55.2
Lalb_Chr10g0101091 Lupinus albus HOM05D008031 ORTHO05D010063 1.5e-33 146.7 174 54.6
Phvul.010G122700 Phaseolus vulgaris HOM05D008031 ORTHO05D010063 3.4e-33 145.6 174 54.0
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 1.7e-32 143.3 174 54.6
VMungo0331G1222 Vigna mungo HOM05D008031 ORTHO05D010063 4.2e-31 138.7 175 53.1
Medtr8g023390 Medicago truncatula HOM05D008031 ORTHO05D010063 1.8e-29 133.3 176 52.3
TPR.G29474 Trifolium pratense HOM05D008031 ORTHO05D010063 4.1e-26 122.1 178 50.0
Glyma.16G014500 Glycine max HOM05D008031 ORTHO05D010063 7.7e-25 117.9 171 49.1
Manes.04G151400 Manihot esculenta HOM05D008031 ORTHO05D010063 8.0e-22 107.8 167 44.9
Potri.001G162100 Populus trichocarpa HOM05D008031 ORTHO05D010063 1.4e-21 107.1 169 43.2
GSVIVG01016662001 Vitis vinifera HOM05D008031 ORTHO05D010063 3.0e-21 105.9 159 44.7
Haze_16140 Corylus avellana HOM05D001728 ORTHO05D004321 7.4e-20 101.3 169 45.0
Ciclev10027015m.g Citrus clementina HOM05D008031 ORTHO05D010063 4.1e-18 95.5 146 43.2
Cpa.g.sc25.199 Carica papaya HOM05D008031 ORTHO05D010063 9.1e-18 94.4 174 41.4
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 1.2e-17 94.0 174 44.3
CiPaw.01G211000 Carya illinoinensis HOM05D008031 ORTHO05D010063 1.6e-17 93.6 174 43.7
Atru.chr1.4161 Acer truncatum HOM05D008031 ORTHO05D010063 2.0e-17 93.2 166 48.2
MELO3C022708.2 Cucumis melo HOM05D008031 ORTHO05D010063 2.6e-17 92.8 169 40.2
CsaV3_3G031060 Cucumis sativus L. HOM05D008031 ORTHO05D010063 4.5e-17 92.0 158 41.8
Sed0024761 Sechium edule HOM05D008031 ORTHO05D010063 1.7e-16 90.1 164 43.3
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 2.9e-16 89.4 169 40.8
TWI14G1127 Tripterygium wilfordii HOM05D008031 ORTHO05D010063 5.0e-16 88.6 161 42.9
Potri.003G073200 Populus trichocarpa HOM05D008031 ORTHO05D010063 6.5e-16 88.2 169 39.6
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 8.5e-16 87.8 172 40.7
Cfa003457 Carpinus fangiana HOM05D008031 ORTHO05D010063 1.9e-15 86.7 172 42.4
QL05p000882 Quercus lobata HOM05D008031 ORTHO05D010063 1.9e-15 86.7 169 40.2
QL05p001111 Quercus lobata HOM05D008031 ORTHO05D010063 1.9e-15 86.7 169 40.2
Thecc.06G130800 Theobroma cacao HOM05D008031 ORTHO05D010063 2.5e-15 86.3 170 38.8
Hma1.2p1_0090F.1_g045750 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 4.2e-15 85.5 156 41.0
Hma1.2p1_2628F.1_g325675 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 4.2e-15 85.5 156 41.0
COL.COLO4_30875 Corchorus olitorius HOM05D008031 ORTHO05D010063 5.5e-15 85.1 172 39.5
PGR102G3014 Punica granatum HOM05D008031 ORTHO05D010063 5.5e-15 85.1 169 40.2
CiPaw.02G130600 Carya illinoinensis HOM05D008031 ORTHO05D010063 1.2e-14 84.0 179 41.3
ClCG07G014260 Citrullus lanatus HOM05D008031 ORTHO05D010063 1.2e-14 84.0 164 40.9
FAN05G2192 Fragaria x ananassa HOM05D008031 ORTHO05D010063 4.7e-14 82.0 144 40.3
Prupe.3G030600 Prunus persica HOM05D008031 ORTHO05D010063 6.1e-14 81.6 169 36.7
Gohir.D10G051032 Gossypium hirsutum HOM05D001728 ORTHO05D004321 8.0e-14 81.3 172 40.1
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 2.3e-13 79.7 172 40.7
Gorai.011G054900 Gossypium raimondii HOM05D001728 ORTHO05D004321 2.3e-13 79.7 172 39.5
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 4.0e-13 79.0 171 38.6
Gohir.A10G048037 Gossypium hirsutum HOM05D001728 ORTHO05D004321 5.2e-13 78.6 172 39.5
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 1.5e-12 77.0 177 38.4
FAN02G3240 Fragaria x ananassa HOM05D008031 ORTHO05D010063 2.0e-12 76.6 169 38.5
Migut.I01137 Erythranthe guttata HOM05D008031 ORTHO05D010063 2.6e-12 76.3 173 39.9
FvH4_6g35970 Fragaria vesca HOM05D008031 ORTHO05D010063 2.6e-12 76.3 167 37.1
FAN09G4453 Fragaria x ananassa HOM05D008031 ORTHO05D010063 2.6e-12 76.3 167 37.1
FAN14G4753 Fragaria x ananassa HOM05D008031 ORTHO05D010063 2.6e-12 76.3 167 37.1
Oeu053417.1 Olea europaea HOM05D008031 ORTHO05D010063 3.3e-12 75.9 172 36.6
CSS0025062 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004321 5.7e-12 75.1 172 36.0
RcHm_v2.0_Chr2g0148091 Rosa chinensis HOM05D008031 ORTHO05D010063 5.7e-12 75.1 168 36.9
Peaxi162Scf00038g02327 Petunia axillaris HOM05D008031 ORTHO05D010063 1.3e-11 73.9 172 36.6
SGA_v2.0_scaffold71G23934 Striga asiatica HOM05D008031 ORTHO05D010063 1.7e-11 73.6 156 37.8
Rhsim08G0245200 Rhododendron simsii HOM05D008031 ORTHO05D010063 2.2e-11 73.2 165 39.4
MD09G1172200 Malus domestica HOM05D008031 ORTHO05D010063 2.8e-11 72.8 155 37.4
Duzib235G0155 Durio zibethinus HOM05D008031 ORTHO05D010063 3.7e-11 72.4 141 39.0
Eucgr.J02592 Eucalyptus grandis HOM05D008031 ORTHO05D010063 1.1e-10 70.9 173 38.2
Lsat_1_v5_gn_4_90600 Lactuca sativa HOM05D008031 ORTHO05D010063 1.4e-10 70.5 150 38.7
Ah.08g217400 Amaranthus hybridus HOM05D008031 ORTHO05D010063 1.8e-10 70.1 168 36.9
MD17G1154700 Malus domestica HOM05D008031 ORTHO05D010063 2.4e-10 69.7 155 38.1
Solyc03g123670.3 Solanum lycopersicum HOM05D008031 ORTHO05D010063 3.1e-10 69.3 173 36.4
Oeu006417.1 Olea europaea HOM05D005099 ORTHO05D006087 9.1e-10 67.8 172 34.3
Sopen03g041440 Solanum pennellii HOM05D008031 ORTHO05D010063 1.2e-09 67.4 173 35.3
Eucgr.I02164 Eucalyptus grandis HOM05D008031 ORTHO05D010063 2.7e-09 66.2 163 33.7
PGSC0003DMG400009151 Solanum tuberosum HOM05D008031 ORTHO05D010063 5.9e-09 65.1 173 34.1
Aqoxy7G04192 Aquilegia oxysepala HOM05D008031 ORTHO05D010063 1.7e-08 63.5 150 34.7
Dinv20378 Davidia involucrata HOM05D001728 ORTHO05D004321 2.9e-08 62.8 109 44.0
Oeu015468.1 Olea europaea HOM05D008031 ORTHO05D010063 1.5e-07 60.5 152 35.5
Manes.15G010800 Manihot esculenta HOM05D005099 ORTHO05D006087 2.5e-07 59.7 171 32.7
Rhsim02G0007200 Rhododendron simsii HOM05D005099 ORTHO05D006087 3.2e-07 59.3 173 31.8
Duzib212G0134 Durio zibethinus HOM05D005099 ORTHO05D006087 9.4e-07 57.8 186 33.3
Peaxi162Scf00065g00138 Petunia axillaris HOM05D005099 ORTHO05D006087 1.2e-06 57.4 191 29.8
SalBow2G2334 Salvia bowleyana HOM05D005099 ORTHO05D006087 2.7e-06 56.2 168 33.9
Sabra08G0151700 Salix brachista HOM05D005099 ORTHO05D006087 6.1e-06 55.1 178 32.6
Manes.03G198300 Manihot esculenta HOM05D005099 ORTHO05D006087 8.0e-06 54.7 174 30.5


User provided reference genes

Program Settings