Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PU3CYV Arachis hypogaea HOM05D001966 ORTHO05D010449 1.3e-131 473.4 290 100.0
Nn029s41585 Nelumbo nucifera HOM05D001966 ORTHO05D010449 8.4e-11 72.0 54 63.0
Nn064s42222 Nelumbo nucifera HOM05D001966 ORTHO05D010449 8.4e-11 72.0 54 63.0
Nn212s45202 Nelumbo nucifera HOM05D001966 ORTHO05D010449 8.4e-11 72.0 54 63.0
Nn264s45946 Nelumbo nucifera HOM05D001966 ORTHO05D010449 8.4e-11 72.0 54 63.0
Gohir.D09G072950 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.1e-10 71.6 38 81.6
arahy.Tifrunner.gnm1.ann1.A6TYH4 Arachis hypogaea HOM05D001966 ORTHO05D010449 1.9e-10 70.9 41 78.0
arahy.Tifrunner.gnm1.ann1.EPN6WV Arachis hypogaea HOM05D001966 ORTHO05D010449 1.9e-10 70.9 41 78.0
Nn8g40933 Nelumbo nucifera HOM05D001966 ORTHO05D010449 5.4e-10 69.3 54 61.1
Ca_03784_v3 Cicer arietinum L. HOM05D001966 ORTHO05D010449 9.3e-10 68.6 53 62.3
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.2e-09 68.2 45 66.7
arahy.Tifrunner.gnm1.ann1.818UAU Arachis hypogaea HOM05D001966 ORTHO05D010449 1.2e-09 68.2 45 66.7
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 1.2e-09 68.2 45 66.7
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 1.2e-09 68.2 45 66.7
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.2e-09 68.2 45 66.7
BraSC138t45527Z Brassica rapa HOM05D001966 ORTHO05D010449 1.2e-09 68.2 45 66.7
BraSC25t45919Z Brassica rapa HOM05D001966 ORTHO05D010449 1.2e-09 68.2 45 66.7
BraSC59t46542Z Brassica rapa HOM05D001966 ORTHO05D010449 1.2e-09 68.2 45 66.7
Cpa.g.c43052.2 Carica papaya HOM05D001966 ORTHO05D010449 1.2e-09 68.2 45 66.7
Gohir.A05G323716 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.2e-09 68.2 45 66.7
Gohir.A09G102700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.2e-09 68.2 45 66.7
Cpa.g.c38922 Carica papaya HOM05D001966 ORTHO05D010449 3.5e-09 66.6 45 64.4
Potri.011G074100 Populus trichocarpa HOM05D001966 ORTHO05D010449 3.5e-09 66.6 45 64.4
SHI36541 Sapria himalayana HOM05D001966 ORTHO05D010449 3.5e-09 66.6 38 76.3
arahy.Tifrunner.gnm1.ann1.11UFCR Arachis hypogaea HOM05D001966 ORTHO05D010449 6.0e-09 65.9 45 62.2
EL10Ac8g19703 Beta vulgaris HOM05D001966 ORTHO05D010449 6.0e-09 65.9 45 66.7
Gohir.A09G034500 Gossypium hirsutum HOM05D001966 ORTHO05D010449 6.0e-09 65.9 45 66.7
Phvul.002G203800 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 1.0e-08 65.1 38 76.3
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 1.0e-08 65.1 45 64.4
FAN06G1313 Fragaria x ananassa HOM05D001966 ORTHO05D010449 1.3e-08 64.7 38 76.3
Gohir.D12G084201 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.8e-08 64.3 45 64.4
Gorai.008G094200 Gossypium raimondii HOM05D001966 ORTHO05D010449 1.8e-08 64.3 54 59.3
Gohir.A10G065960 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.3e-08 63.9 45 64.4
Lj3g0016717 Lotus japonicus HOM05D001966 ORTHO05D010449 3.0e-08 63.5 45 64.4
Hma1.2p1_0642F.1_g194360 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 3.9e-08 63.2 45 60.0
TPR.G18587 Trifolium pratense HOM05D001966 ORTHO05D010449 3.9e-08 63.2 46 67.4
Glyma.08G269900 Glycine max HOM05D001966 ORTHO05D010449 6.7e-08 62.4 58 53.4
Hma1.2p1_0236F.1_g099130 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 8.7e-08 62.0 45 60.0
Phvul.006G154100 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 8.7e-08 62.0 45 62.2
A02p28440 Brassica napus HOM05D001966 ORTHO05D010449 9.6e-07 58.5 33 75.8
BraA02t07879Z Brassica rapa HOM05D001966 ORTHO05D010449 9.6e-07 58.5 33 75.8
Gohir.A06G105700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.1e-06 57.4 45 60.0
Lj4g0021959 Lotus japonicus HOM05D008259 ORTHO05D010449 3.7e-06 56.6 43 58.1
BraSC143t45650Z Brassica rapa HOM05D001966 ORTHO05D010449 6.2e-06 55.8 30 83.3


User provided reference genes

Program Settings