Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 2.0e-286 988.4 507 100.0
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 2.0e-180 636.3 510 67.3
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 3.3e-180 635.6 479 69.9
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 1.4e-178 630.2 479 68.9
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 8.5e-176 620.9 453 72.0
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 1.6e-174 616.7 453 71.3
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 1.1e-172 610.5 479 67.0
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 2.6e-169 599.4 479 65.8
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 6.3e-155 551.6 455 64.6
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 2.8e-142 509.6 267 98.5
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 2.4e-138 496.5 517 52.4
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 3.0e-128 463.0 482 53.9
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 3.9e-128 462.6 483 52.4
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 8.6e-128 461.5 485 54.0
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 7.3e-127 458.4 515 50.9
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 1.8e-125 453.8 515 49.3
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 6.8e-125 451.8 484 52.7
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.2e-124 451.1 484 53.1
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 2.0e-124 450.3 481 52.8
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 4.4e-124 449.1 507 50.3
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 1.7e-123 447.2 515 48.2
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 3.7e-123 446.0 489 52.4
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 4.9e-123 445.7 518 50.6
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 1.1e-122 444.5 515 48.3
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 2.4e-122 443.4 515 47.6
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 4.1e-122 442.6 564 47.9
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 5.4e-122 442.2 480 51.7
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 7.1e-122 441.8 485 50.3
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 9.2e-122 441.4 516 48.4
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 4.6e-121 439.1 475 53.1
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 7.8e-121 438.3 524 47.3
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 7.8e-121 438.3 485 51.1
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 2.8e-118 429.9 520 50.0
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 3.6e-118 429.5 537 48.0
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 2.6e-116 423.3 529 47.8
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 2.9e-115 419.9 482 48.1
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 4.1e-114 416.0 484 48.6
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 4.1e-114 416.0 517 44.5
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 1.2e-113 414.5 497 48.5
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 2.1e-113 413.7 483 48.2
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 6.6e-112 408.7 487 47.2
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 7.3e-111 405.2 493 47.1
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 7.3e-111 405.2 457 48.6
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 1.2e-110 404.4 458 50.2
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 4.7e-110 402.5 535 44.7
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 4.7e-110 402.5 388 57.0
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 6.8e-109 398.7 437 49.4
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.5e-108 397.5 457 47.7
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 1.5e-108 397.5 469 49.5
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 2.0e-108 397.1 483 47.8
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 2.0e-108 397.1 485 44.7
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 1.3e-107 394.4 506 45.5
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 2.2e-107 393.7 477 47.0
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 3.8e-107 392.9 511 46.8
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 9.3e-106 388.3 478 46.7
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 6.0e-105 385.6 515 45.0
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 6.0e-105 385.6 445 49.2
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 1.3e-104 384.4 512 44.5
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 1.7e-104 384.0 478 45.4
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.1e-103 381.3 504 45.4
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 1.5e-103 380.9 446 49.3
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 1.9e-103 380.6 494 45.7
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 1.9e-103 380.6 475 46.7
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 2.5e-103 380.2 510 45.5
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 3.3e-103 379.8 441 47.4
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 4.3e-103 379.4 467 47.5
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 1.3e-102 377.9 487 46.8
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 4.8e-102 375.9 468 46.2
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 8.1e-102 375.2 482 45.0
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 1.8e-101 374.0 452 47.8
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 6.9e-101 372.1 452 48.7
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 1.2e-100 371.3 462 47.0
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 1.2e-100 371.3 462 47.2
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 1.2e-100 371.3 554 42.1
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 2.6e-100 370.2 443 49.2
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 9.9e-100 368.2 443 48.8
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 1.7e-99 367.5 446 46.6
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 2.2e-99 367.1 443 48.8
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 2.2e-99 367.1 443 48.8
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 1.1e-98 364.8 446 47.3
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 1.9e-98 364.0 456 45.8
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 3.2e-98 363.2 459 47.3
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 9.3e-98 361.7 472 44.7
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 1.2e-97 361.3 498 43.6
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 1.1e-95 354.8 594 38.7
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 1.8e-93 347.4 458 45.6
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 9.0e-93 345.1 443 44.5
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 3.4e-92 343.2 498 41.2
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 5.8e-92 342.4 192 92.7
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 1.7e-91 340.9 443 45.8
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 4.9e-91 339.3 453 41.7
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 9.3e-90 335.1 486 43.6
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 1.2e-89 334.7 331 54.7
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 5.6e-87 325.9 541 37.5
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 1.4e-85 321.2 367 48.8
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 4.6e-81 306.2 453 42.6
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 1.9e-79 300.8 381 43.6
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.9e-79 300.8 308 54.5
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 4.5e-76 289.7 444 40.1
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 5.5e-74 282.7 448 40.8
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 1.0e-72 278.5 368 44.0
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 1.1e-71 275.0 209 67.5
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 5.9e-68 262.7 519 35.3
Psat3g144000 Pisum sativum HOM05D006020 ORTHO05D007665 2.7e-57 227.3 142 78.2
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 4.4e-55 219.9 233 52.8
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.4e-48 198.4 283 42.0
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 5.2e-48 196.4 444 33.8
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 2.6e-47 194.1 316 37.3
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 5.7e-47 193.0 451 29.3
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 9.7e-47 192.2 307 41.0
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 5.3e-45 186.4 452 34.5
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 2.9e-43 180.6 467 30.2
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 1.5e-42 178.3 237 43.5
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 5.5e-42 176.4 270 38.1
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 1.0e-40 172.2 414 31.4
MBI16_g14987_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.1e-33 147.9 126 63.5
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 3.4e-31 140.6 141 49.6
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 6.3e-30 136.3 223 39.9
Cpa.g.sc8.167 Carica papaya HOM05D006020 ORTHO05D007665 4.1e-29 133.7 119 55.5
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 9.2e-21 105.9 118 49.2
PRCOL_00001532 Prasinoderma coloniale HOM05D006020 ORTHO05D007665 2.0e-15 88.2 197 33.5
CBR_g31943 Chara braunii HOM05D006020 ORTHO05D007665 4.4e-15 87.0 68 60.3
Cpa.g.sc8.168 Carica papaya HOM05D006020 ORTHO05D007665 1.1e-10 72.4 108 38.0
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.4e-07 60.8 71 45.1
MCO16G349 Micromonas commoda HOM05D006020 ORTHO05D007665 5.8e-07 60.1 63 44.4
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.3e-06 58.9 98 35.7


User provided reference genes

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