Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 5.7e-72 274.2 149 100.0
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 4.5e-69 264.6 149 98.0
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 1.1e-49 200.3 149 72.5
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 7.0e-46 187.6 153 71.9
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 3.3e-43 178.7 137 72.3
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 5.6e-43 177.9 145 69.7
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 1.6e-42 176.4 148 69.6
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 1.1e-41 173.7 139 68.3
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 1.8e-41 172.9 133 72.2
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 8.9e-41 170.6 134 71.6
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 8.9e-41 170.6 135 68.9
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 4.4e-40 168.3 147 65.3
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 5.8e-40 167.9 142 66.2
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 1.7e-39 166.4 133 67.7
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 4.9e-39 164.9 148 62.2
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 6.4e-39 164.5 129 69.8
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.1e-38 163.7 122 70.5
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.4e-38 163.3 122 70.5
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 2.4e-38 162.5 128 68.8
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 4.1e-38 161.8 124 72.6
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 9.2e-38 160.6 151 60.3
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 2.1e-37 159.5 125 67.2
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 2.1e-37 159.5 141 63.8
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 2.1e-37 159.5 136 69.1
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 3.5e-37 158.7 125 65.6
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 3.5e-37 158.7 146 61.0
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 4.6e-37 158.3 127 66.1
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 7.8e-37 157.5 121 71.1
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 1.0e-36 157.1 139 64.7
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.3e-36 156.8 122 70.5
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 2.3e-36 156.0 123 67.5
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 2.3e-36 156.0 145 61.4
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 3.0e-36 155.6 122 68.0
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 3.0e-36 155.6 123 66.7
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 3.0e-36 155.6 141 61.7
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 6.6e-36 154.5 123 66.7
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 1.1e-35 153.7 123 65.9
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 1.5e-35 153.3 136 61.0
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.9e-35 152.9 140 60.7
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.5e-35 152.5 146 58.9
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 4.3e-35 151.8 127 66.1
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 5.6e-35 151.4 146 58.2
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 5.6e-35 151.4 146 58.2
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 7.3e-35 151.0 122 64.8
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.2e-34 150.2 123 64.2
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 2.8e-34 149.1 117 66.7
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 2.8e-34 149.1 115 67.8
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 4.7e-34 148.3 122 63.9
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 6.2e-34 147.9 117 65.8
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 8.1e-34 147.5 125 64.8
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 1.4e-33 146.7 133 62.4
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 1.4e-33 146.7 133 62.4
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 1.4e-33 146.7 133 62.4
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 1.8e-33 146.4 122 66.4
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 2.4e-33 146.0 130 61.5
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 3.1e-33 145.6 127 63.8
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 3.1e-33 145.6 127 63.8
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 3.1e-33 145.6 121 62.0
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 4.0e-33 145.2 133 61.7
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 4.0e-33 145.2 125 66.4
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 5.2e-33 144.8 120 64.2
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 2.6e-32 142.5 128 60.9
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 3.4e-32 142.1 137 57.7
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 1.3e-31 140.2 144 56.9
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 1.7e-31 139.8 150 54.0
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 2.9e-31 139.0 129 59.7
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 3.8e-31 138.7 146 56.2
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 3.8e-31 138.7 131 60.3
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.9e-30 136.3 124 60.5
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 5.4e-30 134.8 121 59.5
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 5.4e-30 134.8 97 71.1
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 1.2e-29 133.7 150 52.0
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 1.2e-29 133.7 117 60.7
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 1.6e-29 133.3 105 64.8
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 2.7e-29 132.5 136 56.6
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.0e-28 130.6 117 58.1
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 6.2e-26 121.3 151 50.3
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 1.4e-25 120.2 121 54.5
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 9.0e-25 117.5 110 59.1
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 5.8e-24 114.8 123 57.7
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 7.6e-24 114.4 122 56.6
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 1.3e-23 113.6 96 65.6
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 1.7e-23 113.2 122 53.3
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 6.4e-23 111.3 114 57.9
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 1.6e-21 106.7 98 62.2
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 1.6e-21 106.7 96 62.5
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 2.1e-21 106.3 102 58.8
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 3.5e-21 105.5 99 61.6
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 3.0e-20 102.4 109 56.0
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 6.6e-20 101.3 113 46.9
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 4.3e-19 98.6 94 60.6
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 5.6e-19 98.2 71 57.7
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 1.6e-18 96.7 115 49.6
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 8.1e-18 94.4 56 78.6
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 1.8e-17 93.2 113 48.7
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 2.0e-16 89.7 127 42.5
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 3.4e-16 89.0 156 39.7
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 1.3e-15 87.0 120 45.8
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 1.1e-14 84.0 69 68.1
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 2.1e-13 79.7 140 40.7
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 7.9e-13 77.8 137 43.8
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.8e-10 69.3 132 34.8
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 3.7e-10 68.9 137 35.8
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 1.1e-06 57.4 128 37.5
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 4.2e-06 55.5 144 31.9


User provided reference genes

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