Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 6.1e-100 367.5 182 100.0
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 1.7e-81 306.2 195 82.6
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 6.8e-67 257.7 195 69.2
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 4.9e-65 251.5 195 67.7
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 3.1e-64 248.8 196 67.3
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 1.2e-63 246.9 196 69.4
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 2.7e-63 245.7 196 69.4
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 3.5e-63 245.4 196 68.9
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 3.8e-62 241.9 183 69.9
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 8.0e-60 234.2 190 65.8
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 5.4e-56 221.5 184 65.8
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.2e-55 220.3 190 61.6
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 1.6e-55 219.9 190 61.6
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 5.9e-55 218.0 190 61.1
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 5.9e-55 218.0 202 65.8
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.0e-54 217.2 190 59.5
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 1.3e-54 216.9 201 63.7
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 1.7e-54 216.5 190 62.6
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 2.3e-54 216.1 191 62.3
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 3.0e-54 215.7 190 61.6
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.9e-54 215.3 190 61.1
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 5.0e-54 214.9 190 62.1
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 5.0e-54 214.9 190 60.5
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 6.6e-54 214.5 191 63.4
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 1.5e-53 213.4 190 62.1
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.9e-53 213.0 190 61.1
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 2.5e-53 212.6 190 60.0
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 3.3e-53 212.2 190 58.9
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 4.3e-53 211.8 191 62.3
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 9.5e-53 210.7 190 60.0
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 9.5e-53 210.7 190 60.0
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 2.1e-52 209.5 189 59.3
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 2.8e-52 209.1 190 60.0
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 4.7e-52 208.4 190 59.5
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 4.7e-52 208.4 190 60.5
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 4.7e-52 208.4 190 60.5
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 6.2e-52 208.0 196 59.2
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 8.0e-52 207.6 190 59.5
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 1.0e-51 207.2 189 60.8
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.0e-51 207.2 194 57.7
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 2.3e-51 206.1 190 58.9
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 2.3e-51 206.1 190 59.5
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 3.1e-51 205.7 190 58.4
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 5.2e-51 204.9 183 61.2
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 6.8e-51 204.5 191 60.2
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 8.9e-51 204.1 252 48.8
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.2e-50 203.8 190 59.5
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 1.5e-50 203.4 192 60.9
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 4.4e-50 201.8 190 58.9
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 2.9e-49 199.1 190 57.9
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.1e-48 197.2 192 56.8
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.4e-48 196.8 196 56.6
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 1.9e-48 196.4 191 57.1
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 2.4e-48 196.1 191 57.6
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 9.2e-48 194.1 190 56.8
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 1.2e-47 193.7 193 58.0
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 1.2e-47 193.7 192 56.8
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.2e-47 193.7 193 57.0
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.6e-47 193.4 226 51.8
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.6e-47 193.4 187 57.2
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.6e-47 193.4 191 57.1
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.6e-47 193.4 191 57.1
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 2.0e-47 193.0 195 57.4
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.0e-47 193.0 193 57.5
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 2.7e-47 192.6 191 55.5
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.5e-47 192.2 190 56.3
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 6.0e-47 191.4 190 56.3
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 1.0e-46 190.7 192 58.3
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 6.6e-46 188.0 191 57.1
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 8.6e-46 187.6 190 55.8
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 1.1e-45 187.2 191 55.0
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 1.1e-45 187.2 156 63.5
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.1e-45 187.2 191 54.5
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.1e-45 187.2 194 54.6
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 1.9e-45 186.4 190 54.7
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 4.3e-45 185.3 175 58.3
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 1.2e-44 183.7 190 54.7
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 1.6e-44 183.3 190 54.2
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 2.1e-44 183.0 193 53.9
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 4.7e-44 181.8 190 55.8
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 6.2e-44 181.4 189 55.6
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 6.2e-44 181.4 189 55.6
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.8e-43 179.9 192 55.2
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.8e-43 179.9 189 55.0
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 2.3e-43 179.5 186 53.2
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.3e-43 179.5 189 55.0
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 4.0e-43 178.7 189 55.0
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 5.2e-43 178.3 190 54.7
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 7.5e-42 174.5 190 52.6
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 1.6e-39 166.8 191 52.4
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 4.6e-39 165.2 191 52.9
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 1.3e-38 163.7 160 57.5
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 6.6e-38 161.4 161 59.0
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 4.3e-37 158.7 146 58.2
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 9.5e-37 157.5 161 54.7
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 2.9e-33 146.0 143 57.3
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.9e-33 146.0 142 59.2
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 9.2e-32 141.0 193 47.2
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 1.5e-29 133.7 182 45.1
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 1.6e-28 130.2 146 54.8
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 2.8e-28 129.4 152 52.0
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 1.8e-27 126.7 88 67.0
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 5.2e-27 125.2 162 49.4
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 2.9e-25 119.4 96 63.5
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 7.1e-24 114.8 88 63.6
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 3.0e-22 109.4 190 41.1
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 3.6e-20 102.4 90 62.2
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 4.5e-18 95.5 75 60.0
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 4.5e-18 95.5 67 73.1
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 1.3e-17 94.0 166 37.3
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.9e-16 90.1 67 64.2
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 5.4e-16 88.6 132 42.4
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.3e-14 84.0 65 64.6
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 6.7e-14 81.6 155 36.1
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 4.8e-12 75.5 61 60.7
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 1.8e-11 73.6 126 36.5
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 8.4e-09 64.7 95 46.3
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 1.2e-07 60.8 34 85.3
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 7.9e-07 58.2 48 64.6


User provided reference genes

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