Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PL7EZQ Arachis hypogaea HOM05D001695 ORTHO05D002735 6.8e-102 374.0 190 100.0
arahy.Tifrunner.gnm1.ann1.Q3JBH6 Arachis hypogaea HOM05D001695 ORTHO05D002735 5.8e-69 264.6 188 76.6
VMungo0720G1092 Vigna mungo HOM05D001695 ORTHO05D002735 2.9e-28 129.4 167 45.5
Lalb_Chr01g0019951 Lupinus albus HOM05D001695 ORTHO05D002735 7.2e-27 124.8 194 43.3
Medtr7g095920 Medicago truncatula HOM05D001695 ORTHO05D002735 1.6e-26 123.6 188 39.4
MD11G1277000 Malus domestica HOM05D001695 ORTHO05D002735 4.6e-26 122.1 144 47.2
Actinidia09097 Actinidia chinensis HOM05D001695 ORTHO05D002735 6.1e-26 121.7 189 39.7
Glyma.03G158000 Glycine max HOM05D001695 ORTHO05D002735 1.0e-25 120.9 167 43.7
MD03G1256200 Malus domestica HOM05D001695 ORTHO05D002735 1.8e-25 120.2 203 38.4
CiPaw.04G181000 Carya illinoinensis HOM05D001695 ORTHO05D002735 3.9e-25 119.0 172 44.2
Glyma.10G031100 Glycine max HOM05D001695 ORTHO05D002735 5.1e-25 118.6 181 42.5
Lalb_Chr21g0306321 Lupinus albus HOM05D001695 ORTHO05D002735 6.7e-25 118.2 173 41.6
Psat6g058200 Pisum sativum HOM05D001695 ORTHO05D002735 6.7e-25 118.2 187 39.6
Glyma.02G143300 Glycine max HOM05D001695 ORTHO05D002735 8.7e-25 117.9 138 47.8
Prupe.8G233300 Prunus persica HOM05D001695 ORTHO05D002735 8.7e-25 117.9 146 45.2
QL12p042507 Quercus lobata HOM05D001695 ORTHO05D002735 1.1e-24 117.5 191 40.8
Lj1g0012318 Lotus japonicus HOM05D001695 ORTHO05D002735 1.9e-24 116.7 158 43.0
MSTRG.21518 Avicennia marina HOM05D001695 ORTHO05D002735 3.3e-24 115.9 146 45.9
Phvul.001G155600 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 3.3e-24 115.9 158 44.9
CANSAT25G1261 Cannabis sativa HOM05D001695 ORTHO05D002735 5.7e-24 115.2 199 40.7
GSVIVG01003138001 Vitis vinifera HOM05D001695 ORTHO05D002735 9.7e-24 114.4 140 47.9
MSTRG.18276 Avicennia marina HOM05D001695 ORTHO05D002735 1.3e-23 114.0 146 43.8
Medtr1g471050 Medicago truncatula HOM05D001695 ORTHO05D002735 1.3e-23 114.0 190 37.9
Phvul.007G175900 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 1.3e-23 114.0 164 45.1
SalBow4G0856 Salvia bowleyana HOM05D001695 ORTHO05D002735 3.7e-23 112.5 139 46.8
Actinidia24930 Actinidia chinensis HOM05D001695 ORTHO05D002735 4.8e-23 112.1 189 37.0
Migut.D00346 Erythranthe guttata HOM05D001695 ORTHO05D002735 6.3e-23 111.7 167 40.1
Thecc.01G269300 Theobroma cacao HOM05D001695 ORTHO05D002735 8.2e-23 111.3 200 36.5
TAR365G0574 Trochodendron aralioides HOM05D001695 ORTHO05D002735 8.2e-23 111.3 189 38.6
CiPaw.03G256000 Carya illinoinensis HOM05D001695 ORTHO05D002735 1.1e-22 110.9 164 42.7
arahy.Tifrunner.gnm1.ann1.Z2VWUQ Arachis hypogaea HOM05D001695 ORTHO05D002735 2.4e-22 109.8 165 41.2
TWI12G0096 Tripterygium wilfordii HOM05D001695 ORTHO05D002735 2.4e-22 109.8 201 35.8
CSS0025398 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 4.1e-22 109.0 138 44.9
FAN20G2833 Fragaria x ananassa HOM05D001695 ORTHO05D002735 4.1e-22 109.0 142 43.7
DCAR_018439 Daucus carota HOM05D001695 ORTHO05D002735 6.9e-22 108.2 174 39.1
arahy.Tifrunner.gnm1.ann1.S9HU1U Arachis hypogaea HOM05D001695 ORTHO05D002735 9.0e-22 107.8 179 39.1
FAN15G1129 Fragaria x ananassa HOM05D001695 ORTHO05D002735 9.0e-22 107.8 142 42.3
HanXRQChr13g0419591 Helianthus annuus HOM05D001695 ORTHO05D002735 9.0e-22 107.8 140 43.6
Atru.chr5.1541 Acer truncatum HOM05D001695 ORTHO05D002735 1.5e-21 107.1 136 47.8
RcHm_v2.0_Chr6g0289711 Rosa chinensis HOM05D001695 ORTHO05D002735 1.5e-21 107.1 142 42.3
FAN27G1986 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.0e-21 106.7 142 43.0
COL.COLO4_06098 Corchorus olitorius HOM05D001695 ORTHO05D002735 5.9e-21 105.1 142 40.8
Dinv34556 Davidia involucrata HOM05D001695 ORTHO05D002735 5.9e-21 105.1 144 43.1
VMungo1383G2569 Vigna mungo HOM05D001695 ORTHO05D002735 5.9e-21 105.1 165 42.4
Gohir.A07G208000 Gossypium hirsutum HOM05D001695 ORTHO05D002735 7.7e-21 104.8 169 38.5
Gohir.D07G214000 Gossypium hirsutum HOM05D001695 ORTHO05D002735 7.7e-21 104.8 169 38.5
Gorai.001G242000 Gossypium raimondii HOM05D001695 ORTHO05D002735 1.0e-20 104.4 169 38.5
PGR044G2111 Punica granatum HOM05D001695 ORTHO05D002735 1.0e-20 104.4 158 41.1
Atru.chr3.758 Acer truncatum HOM05D001695 ORTHO05D002735 1.3e-20 104.0 148 43.2
Eucgr.K03319 Eucalyptus grandis HOM05D001695 ORTHO05D002735 1.7e-20 103.6 144 43.1
FvH4_2g22790 Fragaria vesca HOM05D001695 ORTHO05D002735 1.7e-20 103.6 142 42.3
Potri.005G216400 Populus trichocarpa HOM05D001695 ORTHO05D002735 1.7e-20 103.6 171 39.2
Sed0027528 Sechium edule HOM05D001695 ORTHO05D002735 1.7e-20 103.6 201 36.3
Cpa.g.sc1247.1 Carica papaya HOM05D001695 ORTHO05D002735 2.2e-20 103.2 183 36.6
ClCG07G000550 Citrullus lanatus HOM05D001695 ORTHO05D002735 2.9e-20 102.8 179 36.9
Ciclev10023937m.g Citrus clementina HOM05D001695 ORTHO05D002735 3.8e-20 102.4 202 35.1
TPR.G19108 Trifolium pratense HOM05D001695 ORTHO05D002735 3.8e-20 102.4 195 32.3
FAN24G2593 Fragaria x ananassa HOM05D001695 ORTHO05D002735 6.5e-20 101.7 142 41.5
Cc01_g18940 Coffea canephora HOM05D001695 ORTHO05D002735 1.1e-19 100.9 176 37.5
MELO3C014318.2 Cucumis melo HOM05D001695 ORTHO05D002735 4.2e-19 99.0 185 34.6
Sabra05G0166000 Salix brachista HOM05D001695 ORTHO05D002735 4.2e-19 99.0 138 44.9
CsaV3_2G013780 Cucumis sativus L. HOM05D001695 ORTHO05D002735 1.2e-18 97.4 144 40.3
DCAR_012509 Daucus carota HOM05D001695 ORTHO05D002735 1.2e-18 97.4 137 40.9
Nn3g19467 Nelumbo nucifera HOM05D001695 ORTHO05D002735 3.6e-18 95.9 191 36.6
ECA236G1508 Erigeron canadensis HOM05D001695 ORTHO05D002735 4.6e-18 95.5 176 34.7
Rhsim01G0271300 Rhododendron simsii HOM05D001695 ORTHO05D002735 6.1e-18 95.1 148 38.5
Zm00001eb114700 Zea mays HOM05D001695 ORTHO05D002735 1.0e-17 94.4 191 31.4
Peaxi162Scf00165g00212 Petunia axillaris HOM05D001695 ORTHO05D002735 2.3e-17 93.2 154 36.4
Zm00001eb114610 Zea mays HOM05D001695 ORTHO05D002735 2.3e-17 93.2 189 31.7
Sed0003781 Sechium edule HOM05D001695 ORTHO05D002735 5.1e-17 92.0 138 40.6
Lsat_1_v5_gn_8_94460 Lactuca sativa HOM05D001695 ORTHO05D002735 2.0e-16 90.1 133 40.6
Potri.002G046500 Populus trichocarpa HOM05D001695 ORTHO05D002735 2.5e-16 89.7 154 35.7
Haze_24517 Corylus avellana HOM05D001695 ORTHO05D002735 3.3e-16 89.4 195 33.8
Solyc09g065750.3 Solanum lycopersicum HOM05D001695 ORTHO05D002735 3.3e-16 89.4 153 35.9
MBI11_g26137_MAGBIO Magnolia biondii HOM05D001695 ORTHO05D002735 4.3e-16 89.0 163 33.7
Aqoxy2G03493 Aquilegia oxysepala HOM05D001695 ORTHO05D002735 7.4e-16 88.2 147 34.0
PSO461G0037 Papaver somniferum HOM05D001695 ORTHO05D002735 7.4e-16 88.2 163 36.8
TPR.G39069 Trifolium pratense HOM05D001695 ORTHO05D002735 1.3e-15 87.4 146 38.4
ECA247G0338 Erigeron canadensis HOM05D001695 ORTHO05D002735 2.8e-15 86.3 173 31.8
PSO121G0001 Papaver somniferum HOM05D001695 ORTHO05D002735 6.3e-15 85.1 163 35.6
PSO210G5739 Papaver somniferum HOM05D001695 ORTHO05D002735 6.3e-15 85.1 163 35.6
PSO210G5800 Papaver somniferum HOM05D001695 ORTHO05D002735 6.3e-15 85.1 163 35.6
Manes.05G082900 Manihot esculenta HOM05D001695 ORTHO05D002735 8.2e-15 84.7 116 43.1
Thhalv10008499m.g Eutrema salsugineum HOM05D001695 ORTHO05D002735 2.4e-14 83.2 144 33.3
Glyma.19G160300 Glycine max HOM05D001695 ORTHO05D002735 5.3e-14 82.0 84 53.6
THA.LOC104801253 Tarenaya hassleriana HOM05D001695 ORTHO05D002735 5.3e-14 82.0 137 36.5
Aa31LG1G9480 Aethionema arabicum HOM05D001695 ORTHO05D002735 2.6e-13 79.7 153 30.7
BraA09t42174Z Brassica rapa HOM05D001695 ORTHO05D002735 4.5e-13 79.0 142 33.8
A09p68380 Brassica napus HOM05D001695 ORTHO05D002735 5.9e-13 78.6 137 35.0
HanXRQChr15g0466931 Helianthus annuus HOM05D001695 ORTHO05D002735 7.7e-13 78.2 169 28.4
CARHR002400 Cardamine hirsuta HOM05D001695 ORTHO05D002735 1.3e-12 77.4 186 31.7
SEGI_39133 Sequoiadendron giganteum HOM05D001695 ORTHO05D002735 2.2e-12 76.6 134 32.1
ECA247G1754 Erigeron canadensis HOM05D001695 ORTHO05D002735 2.9e-12 76.3 148 30.4
C08p52950 Brassica napus HOM05D001695 ORTHO05D002735 3.8e-12 75.9 137 32.8
BolC8t52811H Brassica oleracea HOM05D001695 ORTHO05D002735 3.8e-12 75.9 137 34.3
Nitab4.5_0000187g0060 Nicotiana tabacum HOM05D001695 ORTHO05D002735 5.0e-12 75.5 148 32.4
AT1G03055 Arabidopsis thaliana HOM05D001695 ORTHO05D002735 2.5e-11 73.2 169 32.0
Carub.0001s0219 Capsella rubella HOM05D001695 ORTHO05D002735 2.5e-11 73.2 136 32.4
Sp1g02050 Schrenkiella parvula HOM05D001695 ORTHO05D002735 4.2e-11 72.4 170 30.0
Sc05g0001110 Simmondsia chinensis HOM05D001695 ORTHO05D002735 9.4e-11 71.2 141 32.6
AL1G12510 Arabidopsis lyrata HOM05D001695 ORTHO05D002735 1.2e-10 70.9 177 29.9
Oeu025777.1 Olea europaea HOM05D001695 ORTHO05D002735 6.1e-10 68.6 94 39.4
CSS0041504 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 1.4e-09 67.4 67 52.2
CSS0034323 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 3.0e-09 66.2 67 52.2
CSS0037037 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 3.0e-09 66.2 67 52.2
BcaC07g42270 Brassica carinata HOM05D001695 ORTHO05D002735 5.1e-09 65.5 176 29.0
Lj2A1162G32 Lonicera japonica HOM05D001695 ORTHO05D002735 5.7e-08 62.0 45 71.1
PSO210G5923 Papaver somniferum HOM05D001695 ORTHO05D002735 2.8e-07 59.7 87 41.4
AUR62032273 Chenopodium quinoa HOM05D001695 ORTHO05D002735 8.2e-07 58.2 92 35.9
EL10Ac5g10482 Beta vulgaris HOM05D001695 ORTHO05D002735 5.3e-06 55.5 125 28.8


User provided reference genes

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