Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 2.5e-183 645.2 304 100.0
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 4.4e-180 634.4 304 98.7
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 2.8e-142 508.8 319 76.8
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 5.9e-140 501.1 320 75.3
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 5.1e-136 488.0 318 75.5
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 1.4e-133 479.9 316 74.7
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 2.0e-132 476.1 315 73.0
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 2.2e-131 472.6 318 72.6
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 3.0e-128 462.2 317 71.6
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 6.5e-123 444.5 269 78.1
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 4.4e-119 431.8 322 66.1
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 1.3e-118 430.3 312 66.0
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 1.8e-117 426.4 312 65.7
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 2.4e-117 426.0 312 65.7
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 7.0e-117 424.5 312 66.7
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 7.0e-117 424.5 312 66.0
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 9.1e-117 424.1 312 65.4
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 4.5e-116 421.8 320 63.4
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 4.5e-116 421.8 311 66.9
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 7.7e-116 421.0 323 64.4
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.0e-115 420.6 312 65.7
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 5.0e-115 418.3 318 65.1
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 8.5e-115 417.5 309 64.1
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 1.9e-114 416.4 314 65.0
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 2.5e-114 416.0 311 66.6
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 7.2e-114 414.5 316 63.3
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 1.6e-113 413.3 311 63.3
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 2.1e-113 412.9 313 63.6
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 1.0e-112 410.6 315 63.5
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 1.0e-112 410.6 354 59.0
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 3.0e-112 409.1 321 60.1
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 3.0e-112 409.1 312 61.5
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 6.8e-112 407.9 309 62.1
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 8.8e-112 407.5 320 62.8
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 2.6e-111 406.0 312 60.6
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 2.6e-111 406.0 315 61.9
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 2.6e-111 406.0 307 66.1
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 9.8e-111 404.1 313 62.3
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 9.8e-111 404.1 332 60.5
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 1.3e-110 403.7 317 61.2
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 1.3e-110 403.7 309 61.8
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 1.3e-110 403.7 311 61.7
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 1.3e-110 403.7 312 62.8
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 2.2e-110 402.9 309 61.5
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 4.8e-110 401.7 310 61.6
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 6.3e-110 401.4 309 61.2
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 6.3e-110 401.4 314 60.8
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 8.3e-110 401.0 318 61.6
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 1.4e-109 400.2 309 62.1
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 2.4e-109 399.4 309 61.5
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 2.4e-109 399.4 317 59.6
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 7.0e-109 397.9 305 63.0
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 1.6e-108 396.7 303 60.7
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 1.6e-108 396.7 315 62.9
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 2.7e-108 396.0 317 63.7
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 2.7e-108 396.0 313 63.3
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 1.0e-107 394.0 315 62.5
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 5.0e-107 391.7 308 60.7
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 6.6e-107 391.3 268 71.3
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 3.3e-106 389.0 316 59.8
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 8.0e-105 384.4 316 59.5
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 1.8e-104 383.3 319 60.5
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 1.8e-104 383.3 304 60.9
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 2.3e-104 382.9 306 60.5
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 3.0e-104 382.5 306 60.5
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 4.0e-104 382.1 327 56.6
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 4.0e-104 382.1 318 58.8
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 8.9e-104 380.9 317 59.9
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 1.5e-103 380.2 318 58.5
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 2.0e-103 379.8 318 59.1
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 3.4e-103 379.0 311 60.1
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 5.7e-103 378.3 315 58.4
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 2.2e-102 376.3 314 57.6
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 1.4e-101 373.6 302 59.3
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 4.1e-101 372.1 319 58.3
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 2.0e-100 369.8 320 58.1
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 3.5e-100 369.0 322 57.5
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 4.5e-100 368.6 320 57.8
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 6.6e-99 364.8 312 57.1
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 1.2e-97 360.5 251 67.3
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 4.7e-97 358.6 364 51.4
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 1.3e-94 350.5 315 56.5
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.9e-93 346.7 312 57.4
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 9.2e-93 344.4 237 68.4
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 1.7e-91 340.1 328 55.2
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 3.3e-90 335.9 234 67.9
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 4.3e-90 335.5 226 68.1
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 1.6e-89 333.6 320 54.7
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 1.4e-88 330.5 328 54.6
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 3.4e-87 325.9 236 66.5
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 4.9e-86 322.0 327 52.0
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 1.2e-84 317.4 321 53.6
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 3.1e-80 302.8 310 51.6
Lj2A319G39 Lonicera japonica HOM05D005657 ORTHO05D007104 1.4e-77 293.9 219 62.6
DCAR_027905 Daucus carota HOM05D005657 ORTHO05D007104 3.9e-75 285.8 247 54.3
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 3.9e-75 285.8 304 48.4
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 6.6e-75 285.0 304 47.4
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.9e-74 283.5 314 46.5
AUR62030180 Chenopodium quinoa HOM05D005657 ORTHO05D007104 2.1e-73 280.0 176 72.2
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 2.4e-72 276.6 304 51.0
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 6.8e-72 275.0 317 47.3
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 1.7e-70 270.4 248 56.9
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 3.8e-70 269.2 320 47.5
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 4.2e-69 265.8 264 50.8
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 4.2e-69 265.8 276 50.0
Atru.chr10.1193 Acer truncatum HOM05D005657 ORTHO05D007104 9.3e-69 264.6 211 61.1
BcaB03g12196 Brassica carinata HOM05D005657 ORTHO05D007104 1.8e-64 250.4 173 64.7
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 2.6e-63 246.5 174 73.0
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.0e-59 234.6 172 66.3
Rhsim02G0159300 Rhododendron simsii HOM05D005657 ORTHO05D007104 6.2e-57 225.3 224 51.3
Os07g0153300 Oryza sativa ssp. japonica HOM05D005657 ORTHO05D007104 6.4e-54 215.3 174 62.1
SGA_v2.0_scaffold333G48980 Striga asiatica HOM05D005657 ORTHO05D007104 4.6e-52 209.1 126 74.6
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 5.6e-50 202.2 313 39.0
Hma1.2p1_0020F.1_g014120 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 3.5e-44 183.0 140 60.0
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 5.1e-43 179.1 229 42.8
MCO14G385 Micromonas commoda HOM05D005657 ORTHO05D007104 3.7e-41 172.9 294 39.5
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 1.4e-40 171.0 143 60.1
PGSC0003DMG400002455 Solanum tuberosum HOM05D005657 ORTHO05D007104 2.0e-39 167.2 142 53.5
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 3.8e-38 162.9 113 72.6
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 1.9e-37 160.6 456 28.3
Cre06.g269300 Chlamydomonas reinhardtii HOM05D005657 ORTHO05D007104 4.6e-36 156.0 236 37.7
PRCOL_00005919 Prasinoderma coloniale HOM05D005657 ORTHO05D007104 2.2e-33 147.1 314 33.1
SalBow2G0785 Salvia bowleyana HOM05D005657 ORTHO05D007104 2.7e-28 130.2 170 43.5
SGA_v2.0_scaffold37G14914 Striga asiatica HOM05D005657 ORTHO05D007104 4.2e-21 106.3 61 77.0
unitig_26.g9757 Utricularia gibba HOM05D005657 ORTHO05D007104 8.8e-19 98.6 67 61.2
TPR.G7274 Trifolium pratense HOM05D005657 ORTHO05D007104 2.2e-17 94.0 62 69.4
Phvul.007G245866 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 7.0e-16 89.0 47 80.9
Glyma.08G293333 Glycine max HOM05D005657 ORTHO05D007104 2.2e-14 84.0 51 68.6
COL.COLO4_31053 Corchorus olitorius HOM05D005657 ORTHO05D007104 1.5e-13 81.3 53 66.0
Duzib160G0546 Durio zibethinus HOM05D005657 ORTHO05D007104 4.8e-09 66.2 36 72.2
CSS0012720 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 6.3e-09 65.9 37 75.7
SGA_v2.0_scaffold119G32786 Striga asiatica HOM05D005657 ORTHO05D007104 2.0e-07 60.8 31 83.9
SGA_v2.0_scaffold118G32549 Striga asiatica HOM05D005657 ORTHO05D007104 1.3e-06 58.2 40 67.5
MCO01G569 Micromonas commoda HOM05D005657 ORTHO05D007104 5.0e-06 56.2 42 59.5


User provided reference genes

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