Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PK4DTL Arachis hypogaea HOM05D012916 ORTHO05D014365 1.3e-117 426.4 223 100.0
VMungo1215G2420 Vigna mungo HOM05D012916 ORTHO05D014365 1.5e-28 130.6 117 63.2
Glyma.17G185300 Glycine max HOM05D002660 ORTHO05D003902 2.3e-16 90.1 71 67.6
Dinv03288 Davidia involucrata HOM05D038564 ORTHO05D014365 6.7e-16 88.6 48 93.8
Nitab4.5_0009672g0060 Nicotiana tabacum HOM05D012916 ORTHO05D014365 8.7e-16 88.2 48 93.8
COL.COLO4_04172 Corchorus olitorius HOM05D012916 ORTHO05D014365 5.3e-13 79.0 47 87.2
Nitab4.5_0000592g0200 Nicotiana tabacum HOM05D012916 ORTHO05D014365 2.0e-12 77.0 49 79.6
arahy.Tifrunner.gnm1.ann1.2INJ5A Arachis hypogaea HOM05D002660 ORTHO05D003902 2.6e-12 76.6 110 51.8
Glyma.12G175100 Glycine max HOM05D002660 ORTHO05D003902 1.3e-11 74.3 71 53.5
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 1.4e-10 70.9 50 60.0
MBI14_g38258_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.9e-10 70.5 42 71.4
Lalb_Chr00c24g0406851 Lupinus albus HOM05D002660 ORTHO05D003902 2.5e-10 70.1 42 66.7
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 9.3e-10 68.2 42 69.0
MBI14_g44090_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.2e-09 67.8 40 72.5
Gorai.001G162600 Gossypium raimondii HOM05D012916 ORTHO05D014365 1.6e-09 67.4 34 97.1
Cfa021334 Carpinus fangiana HOM05D002660 ORTHO05D003902 7.9e-09 65.1 39 66.7
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 7.9e-09 65.1 46 58.7
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 7.9e-09 65.1 40 65.0
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.3e-08 64.3 40 67.5
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.3e-08 64.3 40 67.5
Gorai.001G162700 Gossypium raimondii HOM05D002660 ORTHO05D003902 2.3e-08 63.5 54 55.6
Gorai.009G406600 Gossypium raimondii HOM05D002660 ORTHO05D003902 2.3e-08 63.5 54 55.6
Lsat_1_v5_gn_5_13340 Lactuca sativa HOM05D002660 ORTHO05D003902 2.3e-08 63.5 39 61.5
Lsat_1_v5_gn_5_172580 Lactuca sativa HOM05D002660 ORTHO05D003902 2.3e-08 63.5 39 61.5
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 5.1e-08 62.4 57 52.6
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 5.1e-08 62.4 41 65.9
TAR626G0574 Trochodendron aralioides HOM05D002660 ORTHO05D003902 5.1e-08 62.4 45 57.8
ATR0697G027 Amborella trichopoda HOM05D012916 ORTHO05D014365 6.7e-08 62.0 143 35.0
Nitab4.5_0012260g0040 Nicotiana tabacum HOM05D002660 ORTHO05D003902 6.7e-08 62.0 52 59.6
ATMG01410 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 8.7e-08 61.6 40 57.5
Dinv06680 Davidia involucrata HOM05D002660 ORTHO05D011644 8.7e-08 61.6 40 62.5
Nitab4.5_0000074g0200 Nicotiana tabacum HOM05D004537 ORTHO05D005492 8.7e-08 61.6 39 76.9
Nitab4.5_0005212g0020 Nicotiana tabacum HOM05D000080 ORTHO05D001194 8.7e-08 61.6 41 75.6
SHI41394 Sapria himalayana HOM05D002660 ORTHO05D003902 8.7e-08 61.6 39 59.0
Oeu021479.1 Olea europaea HOM05D002660 ORTHO05D011706 1.1e-07 61.2 51 49.0
Cpa.g.sc263.18 Carica papaya HOM05D002660 ORTHO05D003902 1.5e-07 60.8 77 41.6
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-07 60.5 51 52.9
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 1.9e-07 60.5 40 62.5
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 2.5e-07 60.1 77 41.6
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 2.5e-07 60.1 77 41.6
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 2.5e-07 60.1 77 41.6
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 2.5e-07 60.1 77 41.6
MBI05_g05346_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 2.5e-07 60.1 40 62.5
Hma1.2p1_1430F.1_g282940 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 3.3e-07 59.7 40 62.5
Nitab4.5_0001023g0120 Nicotiana tabacum HOM05D002660 ORTHO05D003902 3.3e-07 59.7 58 48.3
Nitab4.5_0001607g0070 Nicotiana tabacum HOM05D002660 ORTHO05D003902 3.3e-07 59.7 40 65.0
CsaV3_UNG207980 Cucumis sativus L. HOM05D002660 ORTHO05D003902 4.3e-07 59.3 46 56.5
Glyma.08G300900 Glycine max HOM05D002660 ORTHO05D003902 5.7e-07 58.9 86 38.4
Nitab4.5_0003758g0080 Nicotiana tabacum HOM05D002660 ORTHO05D003902 7.4e-07 58.5 41 61.0
CAN.G1001.37 Capsicum annuum HOM05D008580 ORTHO05D010833 9.6e-07 58.2 43 69.8
Hma1.2p1_1529F.1_g289140 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 1.6e-06 57.4 40 60.0
Nitab4.5_0010333g0110 Nicotiana tabacum HOM05D011968 ORTHO05D014241 4.8e-06 55.8 110 35.5
Sed0024408 Sechium edule HOM05D002660 ORTHO05D003902 6.3e-06 55.5 75 41.3
ATMG00490 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 8.2e-06 55.1 41 56.1
CAN.G1355.2 Capsicum annuum HOM05D002660 ORTHO05D003902 8.2e-06 55.1 41 56.1


User provided reference genes

Program Settings