Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 9.1e-295 1016.1 512 100.0
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 1.2e-289 999.2 513 98.8
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 4.3e-284 980.7 513 97.7
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 4.0e-282 974.2 513 96.5
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 1.6e-142 510.4 509 56.8
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 3.2e-138 496.1 522 54.4
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 1.5e-132 477.2 513 52.4
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 1.7e-131 473.8 515 53.8
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 6.4e-131 471.9 518 51.4
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 8.4e-131 471.5 510 52.9
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 2.0e-124 450.3 501 52.1
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 2.6e-124 449.9 525 51.0
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 1.5e-119 434.1 502 51.2
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 1.1e-109 401.4 424 54.2
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 2.3e-104 383.6 511 47.7
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 1.3e-83 314.7 530 39.4
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 4.2e-82 309.7 531 39.4
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 5.3e-77 292.7 550 37.3
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 2.2e-75 287.3 513 38.2
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 6.1e-73 279.3 507 37.3
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 8.0e-73 278.9 539 36.5
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 5.2e-72 276.2 543 34.4
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 1.5e-71 274.6 537 35.9
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 1.5e-71 274.6 529 36.7
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 5.7e-71 272.7 543 36.1
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 9.8e-71 271.9 531 35.2
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 2.8e-70 270.4 545 33.8
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 3.7e-70 270.0 542 36.9
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 3.7e-70 270.0 545 33.6
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 8.3e-70 268.9 524 37.0
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 1.1e-69 268.5 547 33.6
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 2.4e-69 267.3 523 36.9
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 3.1e-69 266.9 534 35.8
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 5.4e-69 266.2 526 37.1
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 5.4e-69 266.2 542 36.7
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 1.2e-68 265.0 539 34.9
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 1.3e-67 261.5 500 35.8
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 1.1e-66 258.5 544 35.3
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 5.5e-66 256.1 546 33.5
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 7.2e-66 255.8 520 36.0
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 3.6e-65 253.4 521 33.4
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 8.0e-65 252.3 502 35.7
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 4.0e-64 250.0 507 33.9
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 1.2e-63 248.4 512 36.9
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 1.7e-62 244.6 533 35.5
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 2.8e-62 243.8 540 34.1
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 2.8e-62 243.8 517 32.9
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.2e-60 238.4 529 34.0
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 2.0e-60 237.7 534 32.6
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 2.7e-60 237.3 537 32.4
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 2.7e-60 237.3 549 33.5
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 4.5e-60 236.5 501 36.7
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 3.8e-59 233.4 540 34.1
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 1.1e-58 231.9 513 33.5
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 5.6e-58 229.6 517 34.8
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 5.6e-58 229.6 459 34.2
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 1.2e-57 228.4 506 32.4
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 1.6e-57 228.0 537 32.4
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.0e-55 221.1 530 33.2
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 3.7e-54 216.9 537 31.8
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 1.1e-53 215.3 534 32.2
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 3.2e-53 213.8 502 30.3
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 1.6e-52 211.5 510 31.2
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 1.1e-50 205.3 511 34.1
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 1.6e-49 201.4 537 30.9
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 6.2e-49 199.5 550 30.9
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 6.2e-49 199.5 516 31.6
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 5.2e-48 196.4 540 30.9
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 2.6e-47 194.1 473 32.1
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 3.7e-46 190.3 520 29.8
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 1.4e-45 188.3 501 29.1
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 2.4e-45 187.6 520 29.6
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 7.0e-45 186.0 527 32.6
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 7.0e-45 186.0 510 30.4
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 2.0e-44 184.5 519 30.1
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 6.0e-44 183.0 385 33.5
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 3.3e-42 177.2 494 28.7
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 9.5e-42 175.6 526 30.6
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 1.6e-41 174.9 533 31.5
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 3.6e-41 173.7 548 31.0
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 4.4e-39 166.8 495 30.1
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 9.9e-39 165.6 530 30.2
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 9.9e-39 165.6 503 30.2
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 2.2e-38 164.5 610 29.3
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 4.1e-37 160.2 504 30.4
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 5.4e-37 159.8 519 30.8
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 7.8e-36 156.0 478 29.9
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 1.3e-35 155.2 522 29.9
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 1.7e-35 154.8 523 30.4
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 1.7e-35 154.8 523 30.4
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 2.5e-34 151.0 530 29.8
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 3.3e-34 150.6 411 31.9
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 5.6e-34 149.8 471 29.1
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 3.6e-33 147.1 508 27.6
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 4.0e-32 143.7 206 44.2
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 1.3e-30 138.7 385 29.6
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 6.4e-30 136.3 152 53.9
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 6.6e-27 126.3 157 47.1
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 8.7e-27 125.9 508 28.7
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.6e-25 121.7 378 30.7
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 9.9e-23 112.5 304 31.9
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 9.3e-21 105.9 137 46.0
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 1.1e-16 92.4 139 40.3
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.1e-16 92.4 230 31.3
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 1.1e-16 92.4 522 21.6
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 3.0e-11 74.3 513 22.4
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 5.1e-11 73.6 476 21.8
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 9.6e-10 69.3 96 40.6
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 3.4e-07 60.8 77 41.6


User provided reference genes

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