Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 1.6e-219 765.8 382 100.0
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 2.5e-188 662.1 382 88.7
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 2.1e-187 659.1 382 88.7
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 9.4e-127 457.6 377 63.4
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 3.6e-126 455.7 374 63.9
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 1.1e-124 450.7 373 62.7
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 2.0e-124 449.9 372 62.9
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 8.2e-123 444.5 384 62.5
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 2.6e-121 439.5 374 64.4
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 2.9e-120 436.0 374 61.2
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 3.8e-112 409.1 309 64.4
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.9e-111 406.8 309 63.4
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 2.5e-111 406.4 380 59.2
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 2.7e-110 402.9 314 63.4
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 2.3e-109 399.8 326 59.5
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 3.9e-109 399.1 380 56.6
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.9e-109 399.1 319 61.8
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.9e-109 399.1 319 61.8
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 6.7e-109 398.3 335 61.2
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.5e-108 397.1 311 62.4
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 2.6e-108 396.4 346 59.2
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 3.3e-108 396.0 368 56.5
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 7.4e-108 394.8 311 62.1
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 7.4e-108 394.8 371 56.3
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 1.7e-107 393.7 318 61.6
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 3.7e-107 392.5 339 59.9
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 3.7e-107 392.5 384 53.6
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 6.3e-107 391.7 347 59.7
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 1.4e-106 390.6 376 56.1
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 7.0e-106 388.3 289 62.3
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 1.6e-105 387.1 312 61.9
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 1.6e-105 387.1 312 61.9
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 1.6e-105 387.1 312 61.9
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 2.0e-105 386.7 365 57.0
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 2.0e-105 386.7 313 60.1
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 7.7e-105 384.8 314 60.8
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 1.3e-104 384.0 371 56.1
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 1.7e-104 383.6 288 63.2
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 3.8e-104 382.5 289 63.0
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 3.8e-104 382.5 312 61.5
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 5.0e-104 382.1 286 62.6
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 6.5e-104 381.7 312 60.6
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 6.5e-104 381.7 367 55.3
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 8.5e-104 381.3 374 57.0
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 2.5e-103 379.8 312 60.6
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 5.5e-103 378.6 322 58.1
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 5.5e-103 378.6 321 60.4
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 7.2e-103 378.3 287 63.8
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 1.2e-102 377.5 371 55.0
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.6e-102 377.1 370 55.1
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 1.6e-102 377.1 293 64.5
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 4.7e-102 375.6 287 63.1
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 6.1e-102 375.2 310 60.0
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 1.4e-101 374.0 316 58.9
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 1.8e-101 373.6 366 54.6
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 2.3e-101 373.2 362 55.5
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 4.0e-101 372.5 316 59.8
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 6.8e-101 371.7 354 54.0
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 2.0e-100 370.2 382 53.4
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 1.3e-99 367.5 387 53.7
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 2.8e-99 366.3 335 55.2
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 3.7e-99 365.9 427 48.9
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 6.3e-99 365.2 315 56.8
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 8.3e-99 364.8 347 58.2
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 8.3e-99 364.8 321 57.3
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 1.1e-98 364.4 350 52.9
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 5.4e-98 362.1 294 62.6
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.2e-97 360.9 388 51.8
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 2.2e-96 356.7 375 50.7
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 2.9e-96 356.3 374 52.9
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 3.8e-96 355.9 259 66.4
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 1.9e-95 353.6 281 61.6
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 8.0e-94 348.2 416 47.6
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 8.8e-93 344.7 287 59.9
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 5.7e-92 342.0 373 48.3
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 3.7e-91 339.3 255 63.5
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 4.9e-91 339.0 279 56.6
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 1.2e-89 334.3 281 55.2
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 2.3e-88 330.1 298 56.4
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 5.6e-87 325.5 346 50.0
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 4.4e-84 315.8 252 62.7
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 8.6e-80 301.6 342 48.5
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 2.1e-78 297.0 319 47.6
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 4.7e-78 295.8 341 48.1
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 4.9e-75 285.8 306 47.7
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 8.3e-75 285.0 305 47.2
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 1.6e-73 280.8 224 59.4
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 6.0e-73 278.9 310 46.8
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.5e-71 274.2 229 58.5
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 2.1e-70 270.4 213 61.0
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.5e-68 264.2 211 59.2
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 4.4e-68 262.7 198 64.6
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 7.5e-68 261.9 260 49.6
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 7.5e-68 261.9 260 49.6
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 2.4e-66 256.9 292 43.2
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 2.1e-65 253.8 212 59.4
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 6.0e-65 252.3 282 49.3
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 6.2e-62 242.3 228 53.5
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 8.1e-62 241.9 298 42.3
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 1.1e-58 231.5 228 53.5
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 1.4e-58 231.1 198 56.6
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.1e-57 227.3 309 41.7
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.1e-57 227.3 309 41.7
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 2.1e-54 217.2 291 39.5
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 5.2e-53 212.6 136 72.8
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 1.1e-47 194.9 344 38.4
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 2.2e-43 180.6 126 66.7
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 8.4e-43 178.7 126 65.9
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.0e-36 157.5 126 61.9
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 5.1e-32 142.9 289 31.8
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 2.2e-27 127.5 183 40.4
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 3.8e-27 126.7 95 62.1
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 9.6e-23 112.1 283 31.8
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 4.5e-20 103.2 68 67.6
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 5.5e-18 96.3 280 30.4
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 6.1e-17 92.8 56 75.0
Psat2g101840 Pisum sativum HOM05D006863 ORTHO05D044797 2.0e-12 77.8 68 60.3
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 3.8e-11 73.6 121 47.1
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 1.4e-10 71.6 288 25.0


User provided reference genes

Program Settings