Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PE3CF6 Arachis hypogaea HOM05D000189 ORTHO05D007330 3.0e-131 471.9 237 100.0
arahy.Tifrunner.gnm1.ann1.YZQB5R Arachis hypogaea HOM05D000189 ORTHO05D007330 2.0e-55 219.9 159 74.8
arahy.Tifrunner.gnm1.ann1.G8XV3D Arachis hypogaea HOM05D000189 ORTHO05D007330 1.1e-53 214.2 173 68.8
arahy.Tifrunner.gnm1.ann1.61MS4Z Arachis hypogaea HOM05D000189 ORTHO05D007330 9.5e-53 211.1 173 67.6
Lj1g0019235 Lotus japonicus HOM05D000189 ORTHO05D007330 7.0e-48 194.9 173 61.3
Phvul.008G027700 Phaseolus vulgaris HOM05D000189 ORTHO05D007330 7.0e-48 194.9 173 61.3
Lalb_Chr17g0336801 Lupinus albus HOM05D000189 ORTHO05D007330 1.2e-47 194.1 173 60.7
VMungo1383G1536 Vigna mungo HOM05D000189 ORTHO05D007330 1.2e-47 194.1 173 61.3
Medtr7g016640 Medicago truncatula HOM05D000189 ORTHO05D007330 1.6e-47 193.7 173 63.0
Ca_06901_v3 Cicer arietinum L. HOM05D000189 ORTHO05D007330 2.0e-47 193.4 173 61.8
Glyma.08G250900 Glycine max HOM05D000189 ORTHO05D007330 2.0e-47 193.4 173 61.3
TPR.G23400 Trifolium pratense HOM05D000189 ORTHO05D007330 5.9e-47 191.8 173 61.8
Psat3g203440 Pisum sativum HOM05D000189 ORTHO05D007330 1.0e-46 191.0 173 61.3
arahy.Tifrunner.gnm1.ann1.7W5PUW Arachis hypogaea HOM05D000189 ORTHO05D007330 6.6e-46 188.3 180 60.0
Glyma.18G273700 Glycine max HOM05D000189 ORTHO05D007330 3.3e-45 186.0 173 59.5
Eucgr.I02060 Eucalyptus grandis HOM05D000189 ORTHO05D007330 2.1e-44 183.3 173 58.4
Cpa.g.sc14.226 Carica papaya HOM05D000189 ORTHO05D007330 3.6e-44 182.6 173 58.4
vmacro18129 Vaccinium macrocarpon HOM05D000189 ORTHO05D007330 6.1e-44 181.8 171 57.9
QL02p065882 Quercus lobata HOM05D000189 ORTHO05D007330 2.3e-43 179.9 173 56.6
Rhsim08G0076900 Rhododendron simsii HOM05D000189 ORTHO05D007330 2.3e-43 179.9 173 56.1
Nn4g23512 Nelumbo nucifera HOM05D000189 ORTHO05D007330 6.8e-43 178.3 174 56.3
Thecc.04G106000 Theobroma cacao HOM05D000189 ORTHO05D007330 8.9e-43 177.9 173 57.2
Ciclev10011633m.g Citrus clementina HOM05D000189 ORTHO05D007330 1.5e-42 177.2 173 56.1
ClCG11G004960 Citrullus lanatus HOM05D000189 ORTHO05D007330 4.4e-42 175.6 173 54.9
Haze_14383 Corylus avellana HOM05D000189 ORTHO05D007330 4.4e-42 175.6 172 57.0
TAR374G0496 Trochodendron aralioides HOM05D000189 ORTHO05D007330 4.4e-42 175.6 171 56.1
Potri.017G099900 Populus trichocarpa HOM05D000189 ORTHO05D007330 5.8e-42 175.3 173 56.1
Aqoxy3G00541 Aquilegia oxysepala HOM05D000189 ORTHO05D007330 7.5e-42 174.9 173 55.5
COL.COLO4_04522 Corchorus olitorius HOM05D000189 ORTHO05D007330 7.5e-42 174.9 173 56.6
MSTRG.2975 Avicennia marina HOM05D000189 ORTHO05D007330 9.8e-42 174.5 173 56.1
PGR004G1516 Punica granatum HOM05D000189 ORTHO05D007330 9.8e-42 174.5 171 56.1
MD17G1065600 Malus domestica HOM05D000189 ORTHO05D007330 1.3e-41 174.1 173 54.9
TWI34G1434 Tripterygium wilfordii HOM05D000189 ORTHO05D007330 1.3e-41 174.1 171 56.1
Cc07_g04460 Coffea canephora HOM05D000189 ORTHO05D007330 1.7e-41 173.7 173 55.5
Gohir.D11G165900 Gossypium hirsutum HOM05D000189 ORTHO05D007330 1.7e-41 173.7 173 57.2
CiPaw.03G083200 Carya illinoinensis HOM05D000189 ORTHO05D007330 2.2e-41 173.3 170 54.7
Gohir.A11G159800 Gossypium hirsutum HOM05D000189 ORTHO05D007330 2.2e-41 173.3 173 57.2
Gorai.007G176900 Gossypium raimondii HOM05D000189 ORTHO05D007330 2.2e-41 173.3 173 57.2
Cfa007694 Carpinus fangiana HOM05D000189 ORTHO05D007330 2.9e-41 172.9 173 56.1
CANSAT64G0162 Cannabis sativa HOM05D000189 ORTHO05D007330 4.9e-41 172.2 173 54.9
MD09G1074200 Malus domestica HOM05D000189 ORTHO05D007330 4.9e-41 172.2 171 55.0
Oeu062177.2 Olea europaea HOM05D000189 ORTHO05D007330 6.4e-41 171.8 170 56.5
Sabra17G0086100 Salix brachista HOM05D000189 ORTHO05D007330 6.4e-41 171.8 173 55.5
Atru.chr8.653 Acer truncatum HOM05D000189 ORTHO05D007330 8.3e-41 171.4 173 54.3
Hma1.2p1_0474F.1_g160720 Hydrangea macrophylla HOM05D000189 ORTHO05D007330 8.3e-41 171.4 171 55.0
Sed0014999 Sechium edule HOM05D000990 ORTHO05D007330 8.3e-41 171.4 182 51.6
CSS0047139 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D007330 1.4e-40 170.6 173 53.2
Dinv34909 Davidia involucrata HOM05D000189 ORTHO05D007330 1.4e-40 170.6 173 56.1
Hma1.2p1_2470F.1_g322730 Hydrangea macrophylla HOM05D000189 ORTHO05D007330 1.4e-40 170.6 171 55.0
Prupe.3G249200 Prunus persica HOM05D000189 ORTHO05D007330 1.4e-40 170.6 173 53.2
GSVIVG01036548001 Vitis vinifera HOM05D000189 ORTHO05D007330 1.4e-40 170.6 171 55.6
Duzib138G0751 Durio zibethinus HOM05D000189 ORTHO05D007330 2.4e-40 169.9 173 55.5
Sed0024546 Sechium edule HOM05D000189 ORTHO05D007330 7.0e-40 168.3 173 53.2
CAN.G497.72 Capsicum annuum HOM05D000189 ORTHO05D007330 1.2e-39 167.5 173 54.3
CsaV3_5G038680 Cucumis sativus L. HOM05D000189 ORTHO05D007330 1.2e-39 167.5 171 53.8
Actinidia18078 Actinidia chinensis HOM05D000189 ORTHO05D007330 1.6e-39 167.2 173 54.3
MELO3C022048.2 Cucumis melo HOM05D000189 ORTHO05D007330 3.5e-39 166.0 190 49.5
SGA_v2.0_scaffold52G19101 Striga asiatica HOM05D000189 ORTHO05D007330 3.5e-39 166.0 171 53.8
Manes.01G103300 Manihot esculenta HOM05D000189 ORTHO05D007330 4.6e-39 165.6 170 54.1
Nitab4.5_0001339g0130 Nicotiana tabacum HOM05D000189 ORTHO05D007330 4.6e-39 165.6 173 53.8
Peaxi162Scf00020g02341 Petunia axillaris HOM05D000189 ORTHO05D007330 4.6e-39 165.6 173 53.8
FAN05G0380 Fragaria x ananassa HOM05D000189 ORTHO05D007330 7.8e-39 164.9 173 53.2
FvH4_6g46400 Fragaria vesca HOM05D000189 ORTHO05D007330 2.3e-38 163.3 173 52.6
FAN02G0545 Fragaria x ananassa HOM05D000189 ORTHO05D007330 2.3e-38 163.3 173 52.6
FAN14G4726 Fragaria x ananassa HOM05D000189 ORTHO05D007330 2.3e-38 163.3 173 52.6
Nitab4.5_0007530g0030 Nicotiana tabacum HOM05D000189 ORTHO05D007330 2.3e-38 163.3 172 52.9
SalBow1G6699 Salvia bowleyana HOM05D000189 ORTHO05D007330 2.3e-38 163.3 173 52.6
DCAR_011021 Daucus carota HOM05D000189 ORTHO05D007330 3.9e-38 162.5 174 52.3
FAN09G1741 Fragaria x ananassa HOM05D000189 ORTHO05D007330 5.0e-38 162.2 173 52.0
FAN09G3709 Fragaria x ananassa HOM05D000189 ORTHO05D007330 5.0e-38 162.2 173 52.0
Lj4A123T21 Lonicera japonica HOM05D000189 ORTHO05D007330 5.0e-38 162.2 173 51.4
Migut.H00588 Erythranthe guttata HOM05D000189 ORTHO05D007330 6.6e-38 161.8 175 53.7
HanXRQChr14g0452471 Helianthus annuus HOM05D000189 ORTHO05D007330 6.6e-38 161.8 170 53.5
Hund27789 Selenicereus undatus HOM05D000189 ORTHO05D007330 6.6e-38 161.8 170 52.9
Hund27792 Selenicereus undatus HOM05D000189 ORTHO05D007330 6.6e-38 161.8 170 52.9
Solyc02g089220.4 Solanum lycopersicum HOM05D000189 ORTHO05D007330 6.6e-38 161.8 173 53.2
Sopen02g034010 Solanum pennellii HOM05D000189 ORTHO05D007330 6.6e-38 161.8 173 53.2
PGSC0003DMG400001467 Solanum tuberosum HOM05D000189 ORTHO05D007330 6.6e-38 161.8 173 53.2
MBI16_g47654_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D007330 1.9e-37 160.2 171 53.2
Ah.16g101050 Amaranthus hybridus HOM05D000189 ORTHO05D007330 2.5e-37 159.8 173 51.4
RcHm_v2.0_Chr2g0164931 Rosa chinensis HOM05D000189 ORTHO05D007330 3.3e-37 159.5 173 51.4
AT3G02300 Arabidopsis thaliana HOM05D000189 ORTHO05D007330 4.3e-37 159.1 173 50.3
THA.LOC104827139 Tarenaya hassleriana HOM05D000189 ORTHO05D007330 4.3e-37 159.1 171 51.5
Sp3g01360 Schrenkiella parvula HOM05D000189 ORTHO05D007330 5.6e-37 158.7 173 49.7
Aa31LG5G12840 Aethionema arabicum HOM05D000189 ORTHO05D007330 7.3e-37 158.3 173 50.3
AL3G11580 Arabidopsis lyrata HOM05D000189 ORTHO05D007330 7.3e-37 158.3 173 50.3
CARHR076270 Cardamine hirsuta HOM05D000189 ORTHO05D007330 9.5e-37 157.9 173 50.3
AUR62023161 Chenopodium quinoa HOM05D000189 ORTHO05D007330 9.5e-37 157.9 173 51.4
Thhalv10020658m.g Eutrema salsugineum HOM05D000189 ORTHO05D007330 9.5e-37 157.9 173 50.9
BcaC05g30344 Brassica carinata HOM05D005505 ORTHO05D007330 1.6e-36 157.1 232 43.5
BcaC05g30349 Brassica carinata HOM05D000189 ORTHO05D007330 1.6e-36 157.1 173 49.7
C09p75650 Brassica napus HOM05D000189 ORTHO05D007330 2.1e-36 156.8 173 49.7
BolC5t35091H Brassica oleracea HOM05D000189 ORTHO05D007330 2.1e-36 156.8 173 49.7
BraA05t23145Z Brassica rapa HOM05D000189 ORTHO05D007330 2.1e-36 156.8 173 49.7
unitig_899.g15109 Utricularia gibba HOM05D000189 ORTHO05D007330 2.1e-36 156.8 173 50.3
Zm00001eb049950 Zea mays HOM05D000189 ORTHO05D007330 2.8e-36 156.4 171 50.9
PSO063G0484 Papaver somniferum HOM05D000189 ORTHO05D007330 4.7e-36 155.6 172 50.0
A05p45160 Brassica napus HOM05D000990 ORTHO05D007330 6.2e-36 155.2 173 49.1
PSO782G3249 Papaver somniferum HOM05D000189 ORTHO05D007330 6.2e-36 155.2 172 50.6
Carub.0003s0141 Capsella rubella HOM05D000189 ORTHO05D007330 1.1e-35 154.5 173 49.7
SEGI_41379 Sequoiadendron giganteum HOM05D000189 ORTHO05D007330 1.1e-35 154.5 171 50.3
EL10Ac2g04443 Beta vulgaris HOM05D000189 ORTHO05D007330 2.3e-35 153.3 173 50.9
AUR62009482 Chenopodium quinoa HOM05D000189 ORTHO05D007330 2.3e-35 153.3 173 50.9
ECA238G0071 Erigeron canadensis HOM05D000189 ORTHO05D007330 2.3e-35 153.3 171 51.5
Hund13675 Selenicereus undatus HOM05D000189 ORTHO05D007330 2.3e-35 153.3 173 49.7
Lsat_1_v5_gn_2_90260 Lactuca sativa HOM05D000189 ORTHO05D007330 3.1e-35 152.9 170 53.5
ATR0827G051 Amborella trichopoda HOM05D000189 ORTHO05D007330 3.4e-34 149.4 192 47.9
Lju361A6T20 Lonicera japonica HOM05D000189 ORTHO05D007330 1.9e-32 143.7 163 50.3
CDE07G0563 Ceratophyllum demersum HOM05D000189 ORTHO05D007330 7.1e-24 115.2 139 47.5
CBR_g41104 Chara braunii HOM05D000189 ORTHO05D007330 1.1e-21 107.8 173 37.6
SMO146G0401 Selaginella moellendorffii HOM05D000189 ORTHO05D007330 1.1e-19 101.3 173 36.4
Sc10g0000610 Simmondsia chinensis HOM05D000189 ORTHO05D007330 4.0e-19 99.4 89 53.9
HPP92_019344 Vanilla planifolia HOM05D000189 ORTHO05D007330 2.2e-17 93.6 131 45.8
Sed0003994 Sechium edule HOM05D002267 ORTHO05D007330 4.9e-17 92.4 66 71.2
Lalb_Chr10g0092751 Lupinus albus HOM05D000189 ORTHO05D007330 7.1e-16 88.6 63 74.6
Lsat_1_v5_gn_5_59120 Lactuca sativa HOM05D001162 ORTHO05D007330 3.3e-13 79.7 63 65.1
Lsat_1_v5_gn_1_103681 Lactuca sativa HOM05D000189 ORTHO05D007330 1.4e-08 64.3 135 34.8


User provided reference genes

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