Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 4.5e-55 217.6 105 100.0
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 4.5e-55 217.6 105 100.0
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 1.4e-35 152.9 107 71.0
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 3.3e-34 148.3 108 74.1
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 3.3e-34 148.3 106 70.8
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 1.7e-33 146.0 108 70.4
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 1.7e-33 146.0 108 71.3
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 3.7e-33 144.8 105 66.7
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 6.3e-33 144.1 105 65.7
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 2.4e-32 142.1 106 69.8
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 1.6e-31 139.4 105 67.6
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 4.5e-31 137.9 108 63.9
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 7.7e-31 137.1 105 66.7
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.7e-30 136.0 107 65.4
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.2e-30 135.6 105 67.6
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 2.9e-30 135.2 118 59.3
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.9e-30 135.2 107 64.5
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 6.5e-30 134.0 105 66.7
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 6.5e-30 134.0 106 62.3
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 6.5e-30 134.0 105 61.0
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 1.5e-29 132.9 107 64.5
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 2.5e-29 132.1 107 62.6
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 4.2e-29 131.3 107 61.7
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 4.2e-29 131.3 107 61.7
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 5.5e-29 131.0 105 60.0
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 5.5e-29 131.0 102 66.7
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 5.5e-29 131.0 107 64.5
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 7.2e-29 130.6 107 61.7
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 9.4e-29 130.2 108 63.0
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 1.2e-28 129.8 105 63.8
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.2e-28 129.8 105 64.8
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 1.6e-28 129.4 105 62.9
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.1e-28 129.0 105 64.8
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 3.6e-28 128.3 111 61.3
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 4.7e-28 127.9 106 64.2
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 6.1e-28 127.5 105 60.0
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 6.1e-28 127.5 105 58.1
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 6.1e-28 127.5 105 62.9
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 8.0e-28 127.1 109 61.5
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 8.0e-28 127.1 109 61.5
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 8.0e-28 127.1 109 61.5
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 8.0e-28 127.1 105 60.0
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 1.0e-27 126.7 106 65.1
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 1.4e-27 126.3 105 61.0
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.4e-27 126.3 105 62.9
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.4e-27 126.3 108 61.1
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.8e-27 125.9 108 64.8
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 2.3e-27 125.6 108 58.3
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 2.3e-27 125.6 105 60.0
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 2.3e-27 125.6 111 57.7
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 2.3e-27 125.6 105 60.0
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 3.0e-27 125.2 106 62.3
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 5.2e-27 124.4 105 60.0
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 5.2e-27 124.4 105 60.0
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 5.2e-27 124.4 105 61.9
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 5.2e-27 124.4 107 59.8
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 6.7e-27 124.0 108 60.2
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 6.7e-27 124.0 108 63.0
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 8.8e-27 123.6 105 60.0
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 8.8e-27 123.6 108 59.3
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 1.1e-26 123.2 108 58.3
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 1.5e-26 122.9 105 61.9
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 1.5e-26 122.9 105 61.9
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 1.5e-26 122.9 105 61.9
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 1.5e-26 122.9 108 58.3
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 1.5e-26 122.9 108 59.3
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 1.5e-26 122.9 101 58.4
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 2.0e-26 122.5 105 61.0
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 2.0e-26 122.5 105 61.0
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 2.0e-26 122.5 105 61.0
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 2.0e-26 122.5 105 61.9
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 2.0e-26 122.5 101 60.4
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 2.6e-26 122.1 105 61.0
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 2.6e-26 122.1 105 61.0
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 4.4e-26 121.3 105 60.0
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 7.5e-26 120.6 105 61.0
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 9.7e-26 120.2 105 56.2
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 9.7e-26 120.2 105 62.9
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 9.7e-26 120.2 103 59.2
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 9.7e-26 120.2 105 61.0
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 1.3e-25 119.8 105 60.0
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 1.3e-25 119.8 104 57.7
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 1.7e-25 119.4 106 57.5
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 1.7e-25 119.4 107 59.8
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 1.7e-25 119.4 105 61.9
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 2.2e-25 119.0 107 58.9
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 2.2e-25 119.0 105 55.2
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.2e-25 119.0 105 61.9
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.2e-25 119.0 105 61.9
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 2.2e-25 119.0 105 61.9
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 3.7e-25 118.2 105 59.0
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 4.8e-25 117.9 110 60.9
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 1.1e-24 116.7 105 58.1
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.1e-24 116.7 109 59.6
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 1.1e-24 116.7 102 54.9
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 1.4e-24 116.3 110 56.4
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.4e-24 116.3 105 59.0
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 1.4e-24 116.3 105 61.0
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 1.8e-24 115.9 105 57.1
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.8e-24 115.9 107 59.8
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.4e-24 115.5 105 58.1
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 4.1e-24 114.8 109 57.8
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 9.1e-24 113.6 105 57.1
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 2.0e-23 112.5 72 73.6
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 2.7e-23 112.1 109 54.1
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 4.5e-23 111.3 62 79.0
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 5.9e-23 110.9 106 55.7
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 2.2e-22 109.0 99 58.6
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 2.9e-22 108.6 67 77.6
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 4.2e-21 104.8 63 74.6
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 7.2e-21 104.0 67 73.1
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 7.2e-21 104.0 96 58.3
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 1.6e-20 102.8 108 54.6
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 3.4e-18 95.1 112 49.1
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 5.7e-18 94.4 105 52.4
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 1.3e-17 93.2 105 49.5
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 5.4e-16 87.8 75 52.0
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 2.7e-15 85.5 119 42.9
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 1.0e-14 83.6 50 66.0
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 6.5e-14 80.9 64 59.4
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.9e-13 79.3 102 43.1
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 3.2e-13 78.6 100 46.0
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 7.2e-13 77.4 96 43.8
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 3.6e-12 75.1 54 68.5
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 2.6e-10 68.9 94 43.6
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.3e-09 66.6 71 52.1
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.7e-09 66.2 71 50.7
TPR.G6988 Trifolium pratense HOM05D006197 ORTHO05D007718 2.2e-09 65.9 70 52.9
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 3.1e-08 62.0 32 81.2
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 3.8e-06 55.1 100 33.0


User provided reference genes

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