Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 1.5e-172 609.4 302 100.0
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 1.5e-172 609.4 302 100.0
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 9.7e-127 457.2 304 74.7
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 2.9e-123 445.7 306 72.5
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 6.5e-123 444.5 303 71.9
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 2.5e-122 442.6 301 73.1
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 8.2e-118 427.6 302 70.9
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 7.7e-116 421.0 298 68.1
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 5.0e-115 418.3 275 78.9
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 7.9e-113 411.0 283 70.7
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 6.3e-110 401.4 277 70.0
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 2.7e-92 342.8 278 60.8
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 3.6e-89 332.4 289 55.7
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 2.0e-87 326.6 270 58.9
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.7e-86 323.6 272 57.4
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 2.2e-86 323.2 287 54.7
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 3.7e-86 322.4 302 55.0
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 8.3e-86 321.2 302 54.6
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 8.3e-86 321.2 229 69.4
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 1.1e-85 320.9 275 57.5
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 1.1e-85 320.9 280 57.1
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 3.1e-85 319.3 280 56.4
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 9.1e-85 317.8 304 53.9
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 9.1e-85 317.8 294 54.4
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 9.1e-85 317.8 294 54.4
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 1.2e-84 317.4 280 56.4
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 2.0e-84 316.6 278 57.6
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 2.0e-84 316.6 278 55.4
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 3.5e-84 315.8 278 54.3
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 7.7e-84 314.7 278 54.7
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 2.9e-83 312.8 281 54.8
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 2.9e-83 312.8 272 57.0
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 2.9e-83 312.8 278 54.3
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 6.6e-83 311.6 298 53.0
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 8.6e-83 311.2 299 53.5
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 8.6e-83 311.2 280 55.0
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 7.2e-82 308.1 280 56.8
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 9.5e-82 307.8 272 57.0
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 1.4e-80 303.9 274 56.2
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 6.8e-80 301.6 279 54.8
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 8.9e-80 301.2 293 53.2
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 2.6e-79 299.7 277 54.5
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 1.3e-78 297.4 280 55.7
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 1.7e-78 297.0 277 53.8
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 4.9e-78 295.4 297 52.2
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 4.9e-78 295.4 272 54.0
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 1.4e-77 293.9 280 54.6
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 1.8e-77 293.5 280 54.6
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 2.4e-77 293.1 282 52.8
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 3.2e-77 292.7 284 53.5
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 7.0e-77 291.6 283 52.7
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 9.2e-77 291.2 272 53.7
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 2.7e-76 289.7 274 54.0
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 6.6e-75 285.0 306 49.3
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 2.5e-74 283.1 239 58.2
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 2.5e-74 283.1 280 52.9
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 4.3e-74 282.3 229 59.8
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 1.2e-73 280.8 276 51.4
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 1.6e-73 280.4 258 55.4
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 3.6e-73 279.3 291 51.2
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 1.0e-72 277.7 274 52.2
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 1.4e-72 277.3 274 52.2
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 8.9e-72 274.6 272 52.2
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 2.6e-71 273.1 252 54.4
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 7.5e-71 271.6 248 54.4
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 4.9e-70 268.9 273 49.8
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 8.3e-70 268.1 275 50.2
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 5.4e-69 265.4 275 49.1
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 9.2e-69 264.6 273 49.8
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 2.0e-68 263.5 246 54.1
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 1.0e-67 261.2 307 45.9
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 1.0e-67 261.2 279 49.5
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.3e-67 260.8 280 48.9
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 1.7e-67 260.4 274 48.9
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 3.9e-67 259.2 225 54.7
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 5.0e-67 258.8 276 48.9
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 6.6e-67 258.5 288 47.6
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 6.6e-67 258.5 288 47.6
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 8.6e-67 258.1 276 49.3
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 2.5e-66 256.5 287 47.0
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 2.5e-66 256.5 287 47.0
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 4.3e-66 255.8 275 48.4
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 4.3e-66 255.8 293 46.8
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 2.1e-65 253.4 273 49.5
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 2.8e-65 253.1 277 47.7
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 1.1e-64 251.1 287 46.7
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 8.9e-64 248.1 362 41.2
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 2.9e-62 243.0 272 47.1
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 1.1e-61 241.1 281 47.0
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 1.9e-61 240.4 372 37.4
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 7.8e-60 235.0 269 46.5
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 5.1e-59 232.3 280 45.7
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 1.5e-58 230.7 298 44.3
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 1.5e-58 230.7 288 47.9
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 1.5e-58 230.7 175 64.0
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 2.5e-58 229.9 265 44.9
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 8.1e-57 224.9 183 61.2
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 3.1e-56 223.0 218 52.3
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 1.2e-55 221.1 215 49.3
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 1.5e-55 220.7 177 61.6
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 2.0e-55 220.3 322 40.7
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 3.4e-55 219.5 276 44.9
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 7.6e-55 218.4 230 51.3
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 1.3e-54 217.6 283 45.2
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 2.2e-54 216.9 173 59.5
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 8.4e-54 214.9 290 45.5
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.1e-53 214.5 175 59.4
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 2.3e-51 206.8 223 47.5
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 1.1e-48 198.0 171 58.5
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 2.0e-47 193.7 274 42.0
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 2.2e-46 190.3 271 40.6
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 6.6e-43 178.7 227 44.5
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 5.6e-42 175.6 176 49.4
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 6.9e-40 168.7 178 44.9
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 9.0e-40 168.3 220 41.4
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 7.1e-37 158.7 161 50.3
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 4.3e-34 149.4 137 54.0
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 1.7e-30 137.5 185 41.1
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 3.0e-27 126.7 82 68.3
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 5.3e-24 115.9 225 34.7
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 3.9e-19 99.8 164 42.1
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 1.1e-18 98.2 283 28.6
Haze_08067 Corylus avellana HOM05D005964 ORTHO05D007242 1.4e-16 91.3 111 42.3
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 9.0e-16 88.6 140 36.4
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 2.7e-12 77.0 107 37.4
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 6.1e-12 75.9 91 45.1
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 7.9e-12 75.5 45 73.3
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 3.4e-07 60.1 44 56.8
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 4.5e-07 59.7 40 65.0


User provided reference genes

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