Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PAB5ST Arachis hypogaea HOM05D000034 ORTHO05D002688 6.0e-206 720.7 387 100.0
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 2.3e-104 383.3 323 74.0
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 5.6e-103 378.6 323 73.1
arahy.Tifrunner.gnm1.ann1.A110NB Arachis hypogaea HOM05D000034 ORTHO05D002688 6.2e-102 375.2 323 71.8
arahy.Tifrunner.gnm1.ann1.0J418G Arachis hypogaea HOM05D000034 ORTHO05D002688 3.9e-96 355.9 323 70.6
arahy.Tifrunner.gnm1.ann1.TXJ7KC Arachis hypogaea HOM05D000034 ORTHO05D002688 7.3e-95 351.7 323 68.4
arahy.Tifrunner.gnm1.ann1.WRA5CI Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-91 340.5 209 95.7
arahy.Tifrunner.gnm1.ann1.AF0AHW Arachis hypogaea HOM05D000034 ORTHO05D000037 4.6e-81 305.8 256 64.8
arahy.Tifrunner.gnm1.ann1.ZTK1D7 Arachis hypogaea HOM05D000034 ORTHO05D002688 5.3e-61 239.2 193 81.9
arahy.Tifrunner.gnm1.ann1.R7WLJ8 Arachis hypogaea HOM05D000034 ORTHO05D002688 3.8e-51 206.5 334 45.5
arahy.Tifrunner.gnm1.ann1.V1HUJD Arachis hypogaea HOM05D000034 ORTHO05D002688 2.7e-49 200.3 334 45.2
arahy.Tifrunner.gnm1.ann1.W93U0I Arachis hypogaea HOM05D000034 ORTHO05D002688 3.3e-47 193.4 342 43.9
arahy.Tifrunner.gnm1.ann1.Y4BLAL Arachis hypogaea HOM05D000034 ORTHO05D002688 1.3e-46 191.4 333 43.5
arahy.Tifrunner.gnm1.ann1.S358G7 Arachis hypogaea HOM05D000034 ORTHO05D002688 2.8e-46 190.3 229 46.7
arahy.Tifrunner.gnm1.ann1.W5JKAZ Arachis hypogaea HOM05D000034 ORTHO05D002688 2.0e-36 157.5 306 44.1
arahy.Tifrunner.gnm1.ann1.H3V410 Arachis hypogaea HOM05D010838 ORTHO05D011964 3.2e-34 150.2 130 83.1
arahy.Tifrunner.gnm1.ann1.M66GIB Arachis hypogaea HOM05D010838 ORTHO05D011964 2.1e-33 147.5 130 82.3
arahy.Tifrunner.gnm1.ann1.T6XU0H Arachis hypogaea HOM05D010838 ORTHO05D002688 3.6e-33 146.7 87 85.1
arahy.Tifrunner.gnm1.ann1.P9V7W9 Arachis hypogaea HOM05D000034 ORTHO05D002688 9.7e-31 138.7 273 34.8
arahy.Tifrunner.gnm1.ann1.YMWQ1S Arachis hypogaea HOM05D000034 ORTHO05D002688 9.7e-31 138.7 165 49.1
arahy.Tifrunner.gnm1.ann1.74AYZW Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-30 137.9 165 49.1
arahy.Tifrunner.gnm1.ann1.75C9FZ Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-30 137.9 165 49.1
Lj1g0008887 Lotus japonicus HOM05D000034 ORTHO05D002688 8.3e-30 135.6 320 35.0
Lj1g0004986 Lotus japonicus HOM05D000034 ORTHO05D002688 1.1e-29 135.2 320 35.0
arahy.Tifrunner.gnm1.ann1.79E4ZF Arachis hypogaea HOM05D000034 ORTHO05D002688 9.1e-29 132.1 303 38.6
arahy.Tifrunner.gnm1.ann1.AHS35P Arachis hypogaea HOM05D000034 ORTHO05D002688 4.2e-26 123.2 199 39.7
arahy.Tifrunner.gnm1.ann1.KVQ1K2 Arachis hypogaea HOM05D000034 ORTHO05D002688 8.0e-25 119.0 218 37.2
arahy.Tifrunner.gnm1.ann1.JI97RZ Arachis hypogaea HOM05D000034 ORTHO05D002688 1.4e-24 118.2 64 85.9
arahy.Tifrunner.gnm1.ann1.MLI6HD Arachis hypogaea HOM05D010838 ORTHO05D002688 1.7e-22 111.3 148 59.5
Medtr4g036040 Medicago truncatula HOM05D000034 ORTHO05D002688 2.2e-22 110.9 308 35.4
Lj1g0022373 Lotus japonicus HOM05D000034 ORTHO05D002688 4.8e-22 109.8 214 36.0
Lj3g0026074 Lotus japonicus HOM05D000034 ORTHO05D002688 2.4e-21 107.5 186 51.1
arahy.Tifrunner.gnm1.ann1.LI2VLV Arachis hypogaea HOM05D000034 ORTHO05D002688 4.5e-20 103.2 149 43.6
arahy.Tifrunner.gnm1.ann1.ZA5JKI Arachis hypogaea HOM05D000034 ORTHO05D002688 2.3e-19 100.9 324 34.9
arahy.Tifrunner.gnm1.ann1.AAD92C Arachis hypogaea HOM05D000034 ORTHO05D002688 2.9e-19 100.5 297 27.6
arahy.Tifrunner.gnm1.ann1.97STDM Arachis hypogaea HOM05D000034 ORTHO05D002688 3.8e-19 100.1 220 44.5
arahy.Tifrunner.gnm1.ann1.UA7YVD Arachis hypogaea HOM05D000034 ORTHO05D002688 3.8e-19 100.1 331 33.2
arahy.Tifrunner.gnm1.ann1.H4XJEH Arachis hypogaea HOM05D000034 ORTHO05D002688 1.5e-18 98.2 338 34.3
Lj1g0018328 Lotus japonicus HOM05D000034 ORTHO05D002688 1.5e-18 98.2 216 33.8
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.2e-18 96.7 249 31.7
arahy.Tifrunner.gnm1.ann1.7N13V0 Arachis hypogaea HOM05D000034 ORTHO05D002688 2.1e-17 94.4 222 41.9
Glyma.02G129632 Glycine max HOM05D000034 ORTHO05D002688 6.1e-17 92.8 224 43.3
Glyma.07G272050 Glycine max HOM05D000034 ORTHO05D002688 6.1e-17 92.8 224 43.3
Glyma.10G052850 Glycine max HOM05D000034 ORTHO05D002688 6.1e-17 92.8 224 43.3
arahy.Tifrunner.gnm1.ann1.QZM42C Arachis hypogaea HOM05D000034 ORTHO05D002688 1.4e-16 91.7 210 31.4
arahy.Tifrunner.gnm1.ann1.MI9789 Arachis hypogaea HOM05D000034 ORTHO05D002688 1.8e-16 91.3 319 33.5
arahy.Tifrunner.gnm1.ann1.ZJZP2C Arachis hypogaea HOM05D000034 ORTHO05D002688 2.3e-16 90.9 233 41.2
Glyma.15G163350 Glycine max HOM05D000034 ORTHO05D002688 2.3e-16 90.9 224 42.9
arahy.Tifrunner.gnm1.ann1.GJGE9U Arachis hypogaea HOM05D000034 ORTHO05D002688 3.0e-16 90.5 296 36.1
arahy.Tifrunner.gnm1.ann1.Q4EACE Arachis hypogaea HOM05D000034 ORTHO05D002688 4.0e-16 90.1 176 33.5
arahy.Tifrunner.gnm1.ann1.UP8VLY Arachis hypogaea HOM05D000034 ORTHO05D002688 5.2e-16 89.7 197 32.0
arahy.Tifrunner.gnm1.ann1.YRUX68 Arachis hypogaea HOM05D000034 ORTHO05D002688 6.8e-16 89.4 301 35.2
arahy.Tifrunner.gnm1.ann1.HTFY5K Arachis hypogaea HOM05D000034 ORTHO05D002688 1.2e-15 88.6 204 43.6
arahy.Tifrunner.gnm1.ann1.JJKW4J Arachis hypogaea HOM05D000034 ORTHO05D002688 2.0e-15 87.8 252 38.5
arahy.Tifrunner.gnm1.ann1.5RUD0X Arachis hypogaea HOM05D000034 ORTHO05D002688 2.6e-15 87.4 211 43.6
arahy.Tifrunner.gnm1.ann1.BVAS0V Arachis hypogaea HOM05D000034 ORTHO05D002688 2.6e-15 87.4 252 28.2
arahy.Tifrunner.gnm1.ann1.PT170J Arachis hypogaea HOM05D000034 ORTHO05D002688 2.6e-15 87.4 214 43.0
arahy.Tifrunner.gnm1.ann1.QJ6RH7 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.6e-15 87.4 84 53.6
arahy.Tifrunner.gnm1.ann1.71FTPI Arachis hypogaea HOM05D000034 ORTHO05D002688 3.4e-15 87.0 219 41.1
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 3.4e-15 87.0 249 30.1
Lalb_Chr18g0055031 Lupinus albus HOM05D000034 ORTHO05D002688 3.4e-15 87.0 196 37.2
arahy.Tifrunner.gnm1.ann1.YZ5R67 Arachis hypogaea HOM05D000034 ORTHO05D002688 5.7e-15 86.3 307 35.5
arahy.Tifrunner.gnm1.ann1.LGDJ99 Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-14 84.7 40 97.5
arahy.Tifrunner.gnm1.ann1.LVB0P9 Arachis hypogaea HOM05D005504 ORTHO05D002688 1.7e-14 84.7 40 97.5
arahy.Tifrunner.gnm1.ann1.G2X2VF Arachis hypogaea HOM05D000034 ORTHO05D002688 2.2e-14 84.3 256 27.3
Medtr7g047540 Medicago truncatula HOM05D000034 ORTHO05D002688 2.8e-14 84.0 189 31.7
Medtr7g451740 Medicago truncatula HOM05D000034 ORTHO05D002688 2.8e-14 84.0 189 31.7
Lj3g0021261 Lotus japonicus HOM05D000034 ORTHO05D002688 3.7e-14 83.6 193 34.2
arahy.Tifrunner.gnm1.ann1.7VN967 Arachis hypogaea HOM05D000034 ORTHO05D002688 6.3e-14 82.8 150 38.0
arahy.Tifrunner.gnm1.ann1.FZQK49 Arachis hypogaea HOM05D000034 ORTHO05D002688 6.3e-14 82.8 91 49.5
arahy.Tifrunner.gnm1.ann1.Z4NP2W Arachis hypogaea HOM05D000034 ORTHO05D002688 6.3e-14 82.8 322 32.9
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 6.3e-14 82.8 210 33.3
arahy.Tifrunner.gnm1.ann1.RN7F5A Arachis hypogaea HOM05D000034 ORTHO05D002688 8.3e-14 82.4 300 35.0
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 8.3e-14 82.4 210 33.3
arahy.Tifrunner.gnm1.ann1.9Y5MLW Arachis hypogaea HOM05D000034 ORTHO05D002688 2.4e-13 80.9 258 27.9
arahy.Tifrunner.gnm1.ann1.NVRL0R Arachis hypogaea HOM05D000034 ORTHO05D002688 5.4e-13 79.7 299 34.8
arahy.Tifrunner.gnm1.ann1.4YXC00 Arachis hypogaea HOM05D005504 ORTHO05D002688 7.0e-13 79.3 90 48.9
arahy.Tifrunner.gnm1.ann1.1I8MYZ Arachis hypogaea HOM05D000034 ORTHO05D002688 1.2e-12 78.6 201 44.3
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 2.0e-12 77.8 217 27.2
Hma1.2p1_0301F.1_g118220 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 2.7e-12 77.4 202 29.7
Lalb_Chr01g0004021 Lupinus albus HOM05D000034 ORTHO05D002688 3.5e-12 77.0 147 32.0
arahy.Tifrunner.gnm1.ann1.ZI7G4V Arachis hypogaea HOM05D000034 ORTHO05D000037 4.5e-12 76.6 288 35.8
Rhsim12G0045600 Rhododendron simsii HOM05D000034 ORTHO05D002688 4.5e-12 76.6 248 29.4
arahy.Tifrunner.gnm1.ann1.HX5DKE Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-11 74.7 221 40.3
arahy.Tifrunner.gnm1.ann1.C92MA9 Arachis hypogaea HOM05D000034 ORTHO05D002688 5.0e-11 73.2 345 30.1
arahy.Tifrunner.gnm1.ann1.AD61WD Arachis hypogaea HOM05D000034 ORTHO05D002688 6.6e-11 72.8 273 36.3
VMungo1080G0120 Vigna mungo HOM05D005504 ORTHO05D002688 6.6e-11 72.8 219 25.6
Phvul.010G084700 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 8.6e-11 72.4 159 30.8
Phvul.004G053900 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.5e-10 71.6 158 31.0
Atru.chr1.2748 Acer truncatum HOM05D005504 ORTHO05D002688 1.9e-10 71.2 141 32.6
arahy.Tifrunner.gnm1.ann1.7BNR23 Arachis hypogaea HOM05D000034 ORTHO05D002688 1.9e-10 71.2 254 36.2
Lj3g0019862 Lotus japonicus HOM05D002645 ORTHO05D002741 1.9e-10 71.2 169 38.5
Phvul.009G122000 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.9e-10 71.2 162 32.1
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 2.5e-10 70.9 172 36.0
Potri.005G252500 Populus trichocarpa HOM05D005504 ORTHO05D002688 2.5e-10 70.9 214 26.6
Phvul.008G165300 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 3.3e-10 70.5 248 24.6
DCAR_005138 Daucus carota HOM05D000034 ORTHO05D002688 4.3e-10 70.1 219 27.4
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.3e-10 70.1 320 21.6
arahy.Tifrunner.gnm1.ann1.0842UC Arachis hypogaea HOM05D000034 ORTHO05D002688 5.6e-10 69.7 151 30.5
AUR62008529 Chenopodium quinoa HOM05D005504 ORTHO05D002688 7.3e-10 69.3 208 28.8
Phvul.010G083800 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.6e-09 68.2 172 30.8
Atru.chr4.843 Acer truncatum HOM05D000034 ORTHO05D002688 2.1e-09 67.8 143 31.5
arahy.Tifrunner.gnm1.ann1.VB528S Arachis hypogaea HOM05D000034 ORTHO05D002688 2.1e-09 67.8 90 41.1
Phvul.003G069400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 3.6e-09 67.0 162 30.9
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 4.7e-09 66.6 205 24.4
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 6.1e-09 66.2 174 28.2
Phvul.001G168600 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 8.0e-09 65.9 162 30.9
CSS0003405 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.8e-08 64.7 139 35.3
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-08 64.3 68 44.1
Peaxi162Scf00008g00018 Petunia axillaris HOM05D008574 ORTHO05D010611 2.3e-08 64.3 181 28.2
Phvul.006G022100 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.3e-08 64.3 157 28.7
ECA238G4441 Erigeron canadensis HOM05D000034 ORTHO05D000562 5.2e-08 63.2 92 34.8
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.9e-08 62.4 180 26.7
arahy.Tifrunner.gnm1.ann1.UAM3U3 Arachis hypogaea HOM05D000034 ORTHO05D002688 1.2e-07 62.0 40 65.0
Phvul.008G129400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.5e-07 61.6 157 29.3
arahy.Tifrunner.gnm1.ann1.VCX407 Arachis hypogaea HOM05D000034 ORTHO05D002688 2.6e-07 60.8 147 30.6
Manes.05G124000 Manihot esculenta HOM05D005504 ORTHO05D002688 2.6e-07 60.8 224 23.7
vmacro21865 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 4.4e-07 60.1 109 34.9
arahy.Tifrunner.gnm1.ann1.JTWU2D Arachis hypogaea HOM05D000034 ORTHO05D000037 5.8e-07 59.7 138 35.5
Duzib093G0882 Durio zibethinus HOM05D005504 ORTHO05D002688 5.8e-07 59.7 241 24.9
arahy.Tifrunner.gnm1.ann1.KDG11W Arachis hypogaea HOM05D005504 ORTHO05D002688 7.5e-07 59.3 29 86.2
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.5e-07 59.3 177 26.6
Phvul.010G071400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 7.5e-07 59.3 157 28.0
vmacro23405 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 7.5e-07 59.3 102 36.3
arahy.Tifrunner.gnm1.ann1.UP2MAN Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-06 58.2 42 59.5
EL10Ac4g08776 Beta vulgaris HOM05D005504 ORTHO05D002688 1.7e-06 58.2 211 23.7
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 2.2e-06 57.8 148 27.7
CSS0018718 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 2.2e-06 57.8 151 37.7
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 2.9e-06 57.4 211 23.2
Peaxi162Scf00002g00292 Petunia axillaris HOM05D008574 ORTHO05D010611 2.9e-06 57.4 191 26.7
CSS0009964 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.9e-06 56.6 174 24.7
Atru.chr13.1509 Acer truncatum HOM05D005504 ORTHO05D002688 6.4e-06 56.2 44 54.5
arahy.Tifrunner.gnm1.ann1.X4EUH5 Arachis hypogaea HOM05D000034 ORTHO05D002688 8.3e-06 55.8 132 30.3
CAN.G234.11 Capsicum annuum HOM05D000198 ORTHO05D003365 8.3e-06 55.8 92 35.9


User provided reference genes

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