Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 1.2e-71 273.1 140 100.0
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 7.3e-45 184.1 94 92.6
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 3.4e-42 175.3 100 81.0
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 7.6e-42 174.1 100 80.0
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 1.3e-41 173.3 100 78.0
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 4.9e-41 171.4 99 78.8
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 6.4e-41 171.0 103 75.7
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 8.4e-41 170.6 93 82.8
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 1.9e-40 169.5 99 80.8
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 2.4e-40 169.1 99 78.8
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 3.2e-40 168.7 93 81.7
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 9.3e-40 167.2 103 74.8
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 9.3e-40 167.2 96 78.1
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 3.5e-39 165.2 103 73.8
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 4.6e-39 164.9 96 79.2
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 1.0e-38 163.7 96 75.0
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 1.0e-38 163.7 96 77.1
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 1.0e-38 163.7 95 78.9
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 1.3e-38 163.3 93 80.6
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 1.3e-38 163.3 96 77.1
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 1.7e-38 162.9 92 81.5
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 1.7e-38 162.9 93 79.6
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 2.3e-38 162.5 92 79.3
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 3.0e-38 162.2 93 80.6
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 3.0e-38 162.2 93 80.6
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 3.9e-38 161.8 102 71.6
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 3.9e-38 161.8 93 79.6
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 3.9e-38 161.8 96 78.1
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 3.9e-38 161.8 96 78.1
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 3.9e-38 161.8 96 78.1
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 6.6e-38 161.0 93 80.6
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 8.7e-38 160.6 93 82.8
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 1.1e-37 160.2 92 79.3
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 1.1e-37 160.2 92 77.2
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 1.1e-37 160.2 93 77.4
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 1.5e-37 159.8 92 80.4
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 1.9e-37 159.5 93 77.4
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 1.9e-37 159.5 93 77.4
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.9e-37 159.5 93 77.4
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.9e-37 159.5 93 77.4
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 2.5e-37 159.1 96 75.0
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 2.5e-37 159.1 93 75.3
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 2.5e-37 159.1 91 78.0
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 2.5e-37 159.1 93 78.5
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 3.3e-37 158.7 93 76.3
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 5.6e-37 157.9 96 76.0
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 5.6e-37 157.9 96 72.9
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 7.3e-37 157.5 92 77.2
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 7.3e-37 157.5 93 77.4
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 9.6e-37 157.1 93 78.5
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 1.3e-36 156.8 95 75.8
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 1.3e-36 156.8 95 75.8
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 1.3e-36 156.8 95 75.8
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 1.6e-36 156.4 93 78.5
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 1.6e-36 156.4 96 75.0
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 1.6e-36 156.4 103 68.9
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 2.1e-36 156.0 93 78.5
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 2.1e-36 156.0 100 71.0
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 2.8e-36 155.6 92 76.1
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 2.8e-36 155.6 96 75.0
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 3.6e-36 155.2 93 75.3
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 4.8e-36 154.8 93 77.4
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 4.8e-36 154.8 93 77.4
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 4.8e-36 154.8 93 77.4
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 4.8e-36 154.8 93 77.4
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 6.2e-36 154.5 93 77.4
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 6.2e-36 154.5 96 75.0
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 1.1e-35 153.7 93 78.5
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 1.1e-35 153.7 93 78.5
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 1.4e-35 153.3 93 75.3
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 1.4e-35 153.3 103 66.0
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 1.4e-35 153.3 97 70.1
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 1.8e-35 152.9 99 68.7
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 1.8e-35 152.9 92 76.1
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 1.8e-35 152.9 103 68.0
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 2.4e-35 152.5 92 73.9
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.4e-35 152.5 100 72.0
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 4.0e-35 151.8 92 73.9
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 5.3e-35 151.4 96 72.9
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 5.3e-35 151.4 92 72.8
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 5.3e-35 151.4 92 75.0
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 9.0e-35 150.6 96 69.8
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 3.4e-34 148.7 93 72.0
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 4.5e-34 148.3 93 73.1
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 2.2e-33 146.0 103 64.1
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 2.9e-33 145.6 175 50.9
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 2.9e-33 145.6 93 72.0
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 4.9e-33 144.8 103 65.0
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 1.4e-32 143.3 93 66.7
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 7.4e-29 131.0 92 60.9
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.6e-28 129.8 73 79.5
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 3.1e-27 125.6 92 67.4
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 4.5e-26 121.7 93 62.4
Manes.18G025338 Manihot esculenta HOM05D005922 ORTHO05D006934 1.3e-25 120.2 73 76.7
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea HOM05D005922 ORTHO05D006934 6.0e-23 111.3 62 83.9
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 4.3e-21 105.1 103 53.4
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 7.6e-18 94.4 59 64.4
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 4.9e-17 91.7 50 78.0
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 1.1e-16 90.5 50 78.0
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 5.5e-16 88.2 68 55.9
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 7.1e-16 87.8 54 66.7
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 2.7e-15 85.9 53 67.9
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 3.0e-14 82.4 50 68.0
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 3.0e-14 82.4 51 64.7
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 3.9e-14 82.0 52 63.5
Haze_10820 Corylus avellana HOM05D005922 ORTHO05D006934 2.8e-12 75.9 43 83.7
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 3.7e-12 75.5 102 37.3
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 6.3e-12 74.7 43 81.4
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 6.3e-12 74.7 44 68.2
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 6.3e-12 74.7 44 65.9
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 1.1e-11 73.9 49 71.4
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 1.8e-11 73.2 42 88.1
Medtr1g102140 Medicago truncatula HOM05D005922 ORTHO05D006934 2.7e-07 59.3 64 50.0
arahy.Tifrunner.gnm1.ann1.11333K Arachis hypogaea HOM05D004234 ORTHO05D004670 5.1e-06 55.1 36 80.6
arahy.Tifrunner.gnm1.ann1.WXBJ4D Arachis hypogaea HOM05D004234 ORTHO05D004670 5.1e-06 55.1 36 80.6


User provided reference genes

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